; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0017268 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0017268
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionLITAF domain-containing protein
Genome locationchr11:29464096..29466683
RNA-Seq ExpressionIVF0017268
SyntenyIVF0017268
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR006629 - LPS-induced tumour necrosis factor alpha factor
IPR037519 - LITAF domain containing protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039847.1 zf-LITAF-like domain-containing protein [Cucumis melo var. makuwa]1.57e-102100Show/hide
Query:  MSKNHEPVVGVPLYVGNNPYQAGQIPPNAIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
        MSKNHEPVVGVPLYVGNNPYQAGQIPPNAIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
Subjt:  MSKNHEPVVGVPLYVGNNPYQAGQIPPNAIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY

Query:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALPG
        CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALPG
Subjt:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALPG
XP_004140553.1 GSH-induced LITAF domain protein [Cucumis sativus]7.49e-10198.51Show/hide
Query:  MSKNHEPVVGVPLYVGNNPYQAGQIPPNAIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
        MSKNHEPVVGVPLYVGNNPYQAGQIPPNAIFGDP GVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKIS AAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
Subjt:  MSKNHEPVVGVPLYVGNNPYQAGQIPPNAIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY

Query:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALPG
        CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALPG
Subjt:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALPG
XP_008459901.1 PREDICTED: uncharacterized protein LOC103498881 [Cucumis melo]9.09e-10299.25Show/hide
Query:  MSKNHEPVVGVPLYVGNNPYQAGQIPPNAIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
        MSKNHEPVVGVPLYVGNNPYQAGQIPPN IFGDPQGVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
Subjt:  MSKNHEPVVGVPLYVGNNPYQAGQIPPNAIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY

Query:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALPG
        CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALPG
Subjt:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALPG
XP_022954275.1 GSH-induced LITAF domain protein [Cucurbita moschata]3.06e-9190.3Show/hide
Query:  MSKNHEPVVGVPLYVGNNPYQAGQIPPNAIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
        MSKN EPVVG+P YVGNN YQAGQIPPNAIFG PQGVPI QTMYRDTPAP+ CVYCGNSGLT+IRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
Subjt:  MSKNHEPVVGVPLYVGNNPYQAGQIPPNAIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY

Query:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALPG
        CPSCKEKVGDFEK D CAVMDPPHWTQPS+ALP 
Subjt:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALPG
XP_022991744.1 GSH-induced LITAF domain protein [Cucurbita maxima]1.52e-9190.3Show/hide
Query:  MSKNHEPVVGVPLYVGNNPYQAGQIPPNAIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
        MSKN EPVVG+P YVGNN YQAGQIPPNAIFG PQGVPI QTMYRDTPAP+ CVYCGNSGLT+IRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
Subjt:  MSKNHEPVVGVPLYVGNNPYQAGQIPPNAIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY

Query:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALPG
        CPSCKEKVGDFEK D CAVMDPPHWTQPS+ALP 
Subjt:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALPG
TrEMBL top hitse value%identityAlignment
A0A0A0KDG7 LITAF domain-containing protein9.0e-7798.51Show/hide
Query:  MSKNHEPVVGVPLYVGNNPYQAGQIPPNAIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
        MSKNHEPVVGVPLYVGNNPYQAGQIPPNAIFGDP GVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKIS AAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
Subjt:  MSKNHEPVVGVPLYVGNNPYQAGQIPPNAIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY

Query:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALPG
        CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALPG
Subjt:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALPG
A0A1S3CCH3 uncharacterized protein LOC1034988811.8e-7799.25Show/hide
Query:  MSKNHEPVVGVPLYVGNNPYQAGQIPPNAIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
        MSKNHEPVVGVPLYVGNNPYQAGQIPPN IFGDPQGVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
Subjt:  MSKNHEPVVGVPLYVGNNPYQAGQIPPNAIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY

Query:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALPG
        CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALPG
Subjt:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALPG
A0A5D3DMB0 Zf-LITAF-like domain-containing protein4.8e-78100Show/hide
Query:  MSKNHEPVVGVPLYVGNNPYQAGQIPPNAIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
        MSKNHEPVVGVPLYVGNNPYQAGQIPPNAIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
Subjt:  MSKNHEPVVGVPLYVGNNPYQAGQIPPNAIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY

Query:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALPG
        CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALPG
Subjt:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALPG
A0A6J1GS01 GSH-induced LITAF domain protein2.4e-6990.98Show/hide
Query:  MSKNHEPVVGVPLYVGNNPYQAGQIPPNAIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
        MSKN EPVVG+P YVGNN YQAGQIPPNAIFG PQGVPI QTMYRDTPAP+ CVYCGNSGLT+IRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
Subjt:  MSKNHEPVVGVPLYVGNNPYQAGQIPPNAIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY

Query:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALP
        CPSCKEKVGDFEK D CAVMDPPHWTQPS+ALP
Subjt:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALP
A0A6J1JVN9 GSH-induced LITAF domain protein1.4e-6990.98Show/hide
Query:  MSKNHEPVVGVPLYVGNNPYQAGQIPPNAIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
        MSKN EPVVG+P YVGNN YQAGQIPPNAIFG PQGVPI QTMYRDTPAP+ CVYCGNSGLT+IRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
Subjt:  MSKNHEPVVGVPLYVGNNPYQAGQIPPNAIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY

Query:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALP
        CPSCKEKVGDFEK D CAVMDPPHWTQPS+ALP
Subjt:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALP
SwissProt top hitse value%identityAlignment
Q94CD4 GSH-induced LITAF domain protein1.5e-5772.18Show/hide
Query:  MSKNHEPVVGVPLYVGNNPYQAGQIPPNAIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
        M+K    V+GVP Y G NPYQAG +PPNAI+GDP G PIQQT+YRDTPAPFNC+YCGN+GLT +RSK  +AAVV CMMPFMLG CFLCPSMDCLW+K H+
Subjt:  MSKNHEPVVGVPLYVGNNPYQAGQIPPNAIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY

Query:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALP
        CP C  KV DFEK D C VMDPP W QPS+ALP
Subjt:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALP
Arabidopsis top hitse value%identityAlignment
AT5G13190.1 CONTAINS InterPro DOMAIN/s: LPS-induced tumor necrosis factor alpha factor (InterPro:IPR006629); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).1.1e-5872.18Show/hide
Query:  MSKNHEPVVGVPLYVGNNPYQAGQIPPNAIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
        M+K    V+GVP Y G NPYQAG +PPNAI+GDP G PIQQT+YRDTPAPFNC+YCGN+GLT +RSK  +AAVV CMMPFMLG CFLCPSMDCLW+K H+
Subjt:  MSKNHEPVVGVPLYVGNNPYQAGQIPPNAIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY

Query:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALP
        CP C  KV DFEK D C VMDPP W QPS+ALP
Subjt:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCAAGAACCACGAGCCGGTCGTCGGAGTTCCACTCTATGTCGGCAACAACCCCTATCAGGCCGGCCAGATCCCTCCCAACGCCATTTTTGGCGATCCCCAGGGGGT
TCCTATTCAACAAACCATGTACCGCGACACTCCTGCTCCTTTCAACTGTGTCTATTGTGGAAATTCCGGCCTCACCACCATCAGGTCAAAGATAAGTTTAGCTGCTGTCG
TTGGTTGTATGATGCCATTTATGTTGGGTGTATGCTTTCTTTGTCCTTCAATGGACTGCCTTTGGCATAAGTATCACTATTGCCCCAGCTGCAAGGAAAAGGTTGGTGAT
TTTGAGAAATTGGATAGATGTGCTGTGATGGATCCTCCACACTGGACACAGCCAAGCTACGCATTGCCTGGTTGA
mRNA sequenceShow/hide mRNA sequence
GTGTATTTGGGTGTGGGGCCAGTGTTAACCAATGGAAACTAAGAATATGTTTTTCTTTGTAAATAATATATGGGCGAAAGATATGGCGTTTTGACTTCGTAATTATCATT
GGAATTCCGTTTTCTATCAATTCCTTCAACACAGAGAAAAGAGAGCGAGATACGAAGCTTACCCGAGCGAAAATGTCCAAGAACCACGAGCCGGTCGTCGGAGTTCCACT
CTATGTCGGCAACAACCCCTATCAGGCCGGCCAGATCCCTCCCAACGCCATTTTTGGCGATCCCCAGGGGGTTCCTATTCAACAAACCATGTACCGCGACACTCCTGCTC
CTTTCAACTGTGTCTATTGTGGAAATTCCGGCCTCACCACCATCAGGTCAAAGATAAGTTTAGCTGCTGTCGTTGGTTGTATGATGCCATTTATGTTGGGTGTATGCTTT
CTTTGTCCTTCAATGGACTGCCTTTGGCATAAGTATCACTATTGCCCCAGCTGCAAGGAAAAGGTTGGTGATTTTGAGAAATTGGATAGATGTGCTGTGATGGATCCTCC
ACACTGGACACAGCCAAGCTACGCATTGCCTGGTTGATTTTGAGGAGCTGCTATTTTCCCATGTGGTTATTTAGCATCATCTGCATTCAGTACTTGCGATACTCTTGTGC
TGTTTTTGTGATGTTCTTGTTACACTTAGGGATAGACACAGTTTGGATATCTTTCCATTTATACAATTGTAATAGAACCAAGTACATGTTTTGTTTTTTATATCTCACCG
CTTGTAAATACCTTGTTCTTACATTGGCCTTGCTGTTTATAGACAATTCTGCTAGCCTAATTTGGATCAATCTTTCCATAGACCTCTTGATCTTGATCATTCATCCCACT
ACTGGAAATGGTATGCATTTATCCAATTCATTACCTTGAATCATCCATGGGGTTTTCTTTTTCTTCTTGATTTGATTATCGAAAGAAATCCAAAAGCAAAGATGGGTTGC
CATGGCCTGCTTGAATTCTGATCAATAATGTTACTATCTGGTTCCACACAAGTAAACAATGAAGAAACATTTTGGAAAAGATAATATACCTGACTTCATTGGAGTCTTGG
ACAGATACAGGGAAAAAGAATTGAAGTCGGATACCGAGGTTCGCAATGTGGGGAAGCAAAGGTTCGACATGAGAAATAAGAGCCGGTCTTGATAGCCAAAGAGACTGCCT
GCATGGATATGACACAACAGGGTTTGATGGCAGCCTTTTGTAGATAATCCCTTCATGAAGTTGCAATCTGCAGGCAAGTCATCCTTGGCTACAATACATGACTCTCCATT
CCCATGTTGAACCTTCCTTCCTCATAAATCAGGTAAAGAATTAAAGCGTCTTTCTTGTTGTATGTTGAATGAAAAAGTTGTGTCCTTTAAGAACCAAAAAGGGG
Protein sequenceShow/hide protein sequence
MSKNHEPVVGVPLYVGNNPYQAGQIPPNAIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKVGD
FEKLDRCAVMDPPHWTQPSYALPG