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IVF0017271 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0017271
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTub domain-containing protein
Genome locationchr04:10355046..10355435
RNA-Seq ExpressionIVF0017271
SyntenyIVF0017271
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037880.1 uncharacterized protein E6C27_scaffold36G00470 [Cucumis melo var. makuwa]4.36e-2289.66Show/hide
Query:  MRNPENATAQPPPYRSACRTTKACLAALKVEPQSSIGSLYHRLLSTIAIVTVIRVLGS
        MRN EN TAQPPP RSACRTTKA  AALKVEPQSSIGSLYHRLLSTIAIVTVIRVLG+
Subjt:  MRNPENATAQPPPYRSACRTTKACLAALKVEPQSSIGSLYHRLLSTIAIVTVIRVLGS
KAA0053092.1 uncharacterized protein E6C27_scaffold778G00180 [Cucumis melo var. makuwa]1.44e-3398.46Show/hide
Query:  RLCTRTPMRNPENATAQPPPYRSACRTTKACLAALKVEPQSSIGSLYHRLLSTIAIVTVIRVLGS
        +LCTRTPMRNPENATAQPPPYRSACRTTKACLAALKVEPQSSIGSLYHRLLSTIAIVTVIRVLGS
Subjt:  RLCTRTPMRNPENATAQPPPYRSACRTTKACLAALKVEPQSSIGSLYHRLLSTIAIVTVIRVLGS
TrEMBL top hitse value%identityAlignment
A0A5A7T3H0 Tub domain-containing protein1.0e-1689.66Show/hide
Query:  MRNPENATAQPPPYRSACRTTKACLAALKVEPQSSIGSLYHRLLSTIAIVTVIRVLGS
        MRN EN TAQPPP RSACRTTKA  AALKVEPQSSIGSLYHRLLSTIAIVTVIRVLG+
Subjt:  MRNPENATAQPPPYRSACRTTKACLAALKVEPQSSIGSLYHRLLSTIAIVTVIRVLGS
A0A5A7UBI0 Uncharacterized protein6.9e-2698.46Show/hide
Query:  RLCTRTPMRNPENATAQPPPYRSACRTTKACLAALKVEPQSSIGSLYHRLLSTIAIVTVIRVLGS
        +LCTRTPMRNPENATAQPPPYRSACRTTKACLAALKVEPQSSIGSLYHRLLSTIAIVTVIRVLGS
Subjt:  RLCTRTPMRNPENATAQPPPYRSACRTTKACLAALKVEPQSSIGSLYHRLLSTIAIVTVIRVLGS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCTCCAAAATTTCATCAAAGTTTTTCCCTCCTTTCATTCCCCTCCCAAATTTCAGAAACCCACTTCTGAAAATCATTCCCCTTCCAAATTTCAAACTCCCTTCTCT
CATTGTCATCTCTCCCTATCTCTCTGATGCTCTTTTCTACTCACCATCTCTCTCTTTTGCCGTTTATCATGCCACGACCAATAGGTTGTGCACCCGTACACCGATGAGGA
ACCCCGAGAACGCTACCGCCCAGCCACCCCCTTATCGTTCAGCTTGTCGGACGACGAAAGCATGCCTAGCCGCACTGAAAGTTGAACCTCAAAGCTCCATTGGAAGTCTC
TACCACAGGTTGCTCTCGACGATTGCCATAGTGACTGTGATTCGTGTCCTTGGTAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGCTCCAAAATTTCATCAAAGTTTTTCCCTCCTTTCATTCCCCTCCCAAATTTCAGAAACCCACTTCTGAAAATCATTCCCCTTCCAAATTTCAAACTCCCTTCTCT
CATTGTCATCTCTCCCTATCTCTCTGATGCTCTTTTCTACTCACCATCTCTCTCTTTTGCCGTTTATCATGCCACGACCAATAGGTTGTGCACCCGTACACCGATGAGGA
ACCCCGAGAACGCTACCGCCCAGCCACCCCCTTATCGTTCAGCTTGTCGGACGACGAAAGCATGCCTAGCCGCACTGAAAGTTGAACCTCAAAGCTCCATTGGAAGTCTC
TACCACAGGTTGCTCTCGACGATTGCCATAGTGACTGTGATTCGTGTCCTTGGTAGTTGA
Protein sequenceShow/hide protein sequence
MCSKISSKFFPPFIPLPNFRNPLLKIIPLPNFKLPSLIVISPYLSDALFYSPSLSFAVYHATTNRLCTRTPMRNPENATAQPPPYRSACRTTKACLAALKVEPQSSIGSL
YHRLLSTIAIVTVIRVLGS