| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0033121.1 gag/pol protein [Cucumis melo var. makuwa] | 1.33e-165 | 64.81 | Show/hide |
Query: KVQTFKARLVAKGYTQREGVDYEETLSPVAMLKSIRILLFIATFYDYEIWQMDVKTAYLNENLEESIYMAQLEGFIKNGLEQKLCNLQKSIY--------
KVQTFKARLVAKGYTQREGVDYEET SPVAMLKSIRILL IATFYDYEIW+MDV TA+LN NLEESI+M+Q EGFI G EQK+C L +SIY
Subjt: KVQTFKARLVAKGYTQREGVDYEETLSPVAMLKSIRILLFIATFYDYEIWQMDVKTAYLNENLEESIYMAQLEGFIKNGLEQKLCNLQKSIY--------
Query: ---------------------------------------DDILLIRNDVGYLTDIKKWLAMEFQMKDLGDAQYVLGIQIVRNRKSRTLAMSQASYIDKML
DDILLI NDVGYLTD+K WLA +FQMKDLG+AQYVLGIQI+R+RK++TLA+SQA+YIDKML
Subjt: ---------------------------------------DDILLIRNDVGYLTDIKKWLAMEFQMKDLGDAQYVLGIQIVRNRKSRTLAMSQASYIDKML
Query: SRYKMQNSKKGLLLYRYGIHLSKKQCPKTPQEVEDMRKFPYASAVGSLI-----------------------------------------TKDYMLVYGT
RY MQNSKKGLL +R+G+HLSK+QCPKTPQEVEDMR+ PYASAVGSL+ T+DYMLVYG
Subjt: SRYKMQNSKKGLLLYRYGIHLSKKQCPKTPQEVEDMRKFPYASAVGSLI-----------------------------------------TKDYMLVYGT
Query: KDLILTGYTDSDFQTDRDARKSTSGSVFTLNGGAVVWRSVKQSCMTDSTMEAEYVAACKAAKEAVWLRKFLTDMEIVPNMHLPITLYCDNSGAVANSREP
KDLILTGYTDSDFQT++D+RKSTS SVFTLNGGA+VWRS+KQ C+ DSTMEAEYVAAC+AAKEAVWLRKFL D+E+VPNM+LPITLYCDNSGAVANS+EP
Subjt: KDLILTGYTDSDFQTDRDARKSTSGSVFTLNGGAVVWRSVKQSCMTDSTMEAEYVAACKAAKEAVWLRKFLTDMEIVPNMHLPITLYCDNSGAVANSREP
Query: RSHKRGKHMERK
RSHKR KH+ERK
Subjt: RSHKRGKHMERK
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| KAA0047406.1 gag/pol protein [Cucumis melo var. makuwa] | 5.71e-167 | 72.36 | Show/hide |
Query: KVQTFKARLVAKGYTQREGVDYEETLSPVAMLKSIRILLFIATFYDYEIWQMDVKTAYLNENLEESIYMAQLEGFIKNGLEQKLCNLQKSIY----DDIL
KVQTFKARLVAKGYTQREGVD+EET S V+MLKSIRILL IATFYDYEI QMDVKT LN NLEESIYMAQLEGFI+NG EQK+ N + DDIL
Subjt: KVQTFKARLVAKGYTQREGVDYEETLSPVAMLKSIRILLFIATFYDYEIWQMDVKTAYLNENLEESIYMAQLEGFIKNGLEQKLCNLQKSIY----DDIL
Query: LIRNDVGYLTDIKKWLAMEFQMKDLGDAQYVLGIQIVRNRKSRTLAMSQASYIDKMLSRYKMQNSKKGLLLYRYGIHLSKKQCPKTPQEVEDMRKFPYAS
LI NDVGYLT+IKKWLA +FQM DLGDAQ+ LGIQIV NRK++T+AMSQASYIDKMLSRYKMQNSKKGL+ Y+YGI LSK+QCPKTPQEVEDMRK YAS
Subjt: LIRNDVGYLTDIKKWLAMEFQMKDLGDAQYVLGIQIVRNRKSRTLAMSQASYIDKMLSRYKMQNSKKGLLLYRYGIHLSKKQCPKTPQEVEDMRKFPYAS
Query: AVGSLI-----------------------------------------TKDYMLVYGTKDLILTGYTDSDFQTDRDARKSTSGSVFTLNGGAVVWRSVKQS
VGSL+ TKDYMLVYGTKDLILTGYTDSDFQT++D R STSGSVFTLNGG VVWRSVKQ+
Subjt: AVGSLI-----------------------------------------TKDYMLVYGTKDLILTGYTDSDFQTDRDARKSTSGSVFTLNGGAVVWRSVKQS
Query: CMTDSTMEAEYVAACKAAKEAVWLRKFLTDMEIVPNMHLPITLYCDNSGAVANSREPRSHKRGKHMERK
C+ +STME EYV C+AAKEAVWLRKFLTD+EIVPNMHLPITLYCDNSGA+ANSREPRSHKR KH+E K
Subjt: CMTDSTMEAEYVAACKAAKEAVWLRKFLTDMEIVPNMHLPITLYCDNSGAVANSREPRSHKRGKHMERK
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| KAA0065524.1 gag/pol protein [Cucumis melo var. makuwa] | 0.0 | 79.56 | Show/hide |
Query: MRPSWKVQTFKARLVAKGYTQREGVDYEETLSPVAMLKSIRILLFIATFYDYEIWQMDVKTAYLNENLEESIYMAQLEGFIKNGLEQKLCNLQKSIYDDI
MRPSWKVQTFKARLVAKGYTQREGVDYEETLSPVAMLKSIRILLFIATFYDYEIWQMDVKTAYLNENLEESIYMAQLEG
Subjt: MRPSWKVQTFKARLVAKGYTQREGVDYEETLSPVAMLKSIRILLFIATFYDYEIWQMDVKTAYLNENLEESIYMAQLEGFIKNGLEQKLCNLQKSIYDDI
Query: LLIRNDVGYLTDIKKWLAMEFQMKDLGDAQYVLGIQIVRNRKSRTLAMSQASYIDKMLSRYKMQNSKKGLLLYRYGIHLSKKQCPKTPQEVEDMRKFPYA
NDVGYLTDIKKWLAMEFQMKDLGDAQYVLGIQIVRNRKSRTLAMSQASYIDKMLSRYKMQNSKKGLLLYRYGIHLSKKQCPKTPQEVEDMRKFPYA
Subjt: LLIRNDVGYLTDIKKWLAMEFQMKDLGDAQYVLGIQIVRNRKSRTLAMSQASYIDKMLSRYKMQNSKKGLLLYRYGIHLSKKQCPKTPQEVEDMRKFPYA
Query: SAVGSLI-------------------TKDYMLVYGTKDLILTGYTDSDFQTDRDARKSTSGSVFTLNGGAVVWRSVKQSCMTDSTMEAEYVAACKAAKEA
SAVGSL+ TKDYMLVYGTKDLILTGYTDSDFQTDRDARKS SGSVFTLNGGAVVWRSVKQSCMTDSTMEAEYVAACKAAKEA
Subjt: SAVGSLI-------------------TKDYMLVYGTKDLILTGYTDSDFQTDRDARKSTSGSVFTLNGGAVVWRSVKQSCMTDSTMEAEYVAACKAAKEA
Query: VWLRKFLTDMEIVPNMHLPITLYCDNSGAVANSREPRSHKRGKHMERK----------------------------------------------------
VWLRKFLTDMEIVPNMHLPITLYCDNSGAVANSREPRSHKRGKHMERK
Subjt: VWLRKFLTDMEIVPNMHLPITLYCDNSGAVANSREPRSHKRGKHMERK----------------------------------------------------
Query: ---------------------GRYFKSTPPRRPYRLPSKKPQVNVSKSSYLHVHAEFIAECVAEDVETAPSVSETHTTYMDFNERDDVPLARLLKKGLFS
GRYFKSTPPRRPYRLPSKKPQVNVSKSSYLHVHAEFIAECVAEDVETAPSVSETHTTYMDFNERDDVPLARLLKKGLFS
Subjt: ---------------------GRYFKSTPPRRPYRLPSKKPQVNVSKSSYLHVHAEFIAECVAEDVETAPSVSETHTTYMDFNERDDVPLARLLKKGLFS
Query: NVVPAKSVDPITSTHSHESSSYKDIFVPTPSHSPTTNEGAGQSGPSPLVKSSIQVDASITDHRLVPDSNPIDKTTENVGRNDVPVDESIIIDAHVESTNT
NVVPAKS+DPITSTHSHESSSYKDIFVPTPSHSPTTNEGAGQSGPSPLVKSSIQVDAS+TDHRLVPDSNPIDKTTENVGRNDVPVDESIIIDAHVESTNT
Subjt: NVVPAKSVDPITSTHSHESSSYKDIFVPTPSHSPTTNEGAGQSGPSPLVKSSIQVDASITDHRLVPDSNPIDKTTENVGRNDVPVDESIIIDAHVESTNT
Query: CATDTIEPDVNDELQPETQQSPGVSRPKGKKFQQNRRNITTKTRRKKIPSNIPSVPIDGISFHLEESVQRWKYVVQRRIADEVNISDKHHSCLSIMGLIE
CATDTIEPDVNDELQPETQQSPGVSRPKGKKFQQNRRNITTKTRRKKIPSNIPSVPIDGISFHLEESVQRWKYVVQRRIADEVNISDKHHSCLSIMGLIE
Subjt: CATDTIEPDVNDELQPETQQSPGVSRPKGKKFQQNRRNITTKTRRKKIPSNIPSVPIDGISFHLEESVQRWKYVVQRRIADEVNISDKHHSCLSIMGLIE
Query: KAGLFKTISNVGPFYPRLIRKFIVNFPSDFNDPSSLDYQTVHIRGLKFKINPAVINEFLVLTTLDAPRPEPKTLSLSYRLFQGSHVLDIEHDMQPSRDPR
KA VLTTLDAPRPEPKTLSLSYRLFQGSHVLDIEHDMQPSRDPR
Subjt: KAGLFKTISNVGPFYPRLIRKFIVNFPSDFNDPSSLDYQTVHIRGLKFKINPAVINEFLVLTTLDAPRPEPKTLSLSYRLFQGSHVLDIEHDMQPSRDPR
Query: IFDTEDLDEGAEGFFVHQNLASRIVNTLTAESRALSTSINLFSERRVEVDLFIRHLKTLTPSTSTGKHGLE
IFDTEDLDEGAEGFFVHQNLASRIVNTLTAESRALSTSINLFSERRVEVDLFIRHLKTLTPSTSTGKHGLE
Subjt: IFDTEDLDEGAEGFFVHQNLASRIVNTLTAESRALSTSINLFSERRVEVDLFIRHLKTLTPSTSTGKHGLE
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| TYK03644.1 gag/pol protein [Cucumis melo var. makuwa] | 3.15e-167 | 66.02 | Show/hide |
Query: KVQTFKARLVAKGYTQREGVDYEETLSPVAMLKSIRILLFIATFYDYEIWQMDVKTAYLNENLEESIYMAQLEGFIKNGLEQKLCNLQKSIY--------
KVQTFKARLVAKGYTQ+EG+DYEE S AM+KSIRILL IATFYDYEIWQMDVKT +LN NLEESIYM Q E FI+ G EQK+C LQKSIY
Subjt: KVQTFKARLVAKGYTQREGVDYEETLSPVAMLKSIRILLFIATFYDYEIWQMDVKTAYLNENLEESIYMAQLEGFIKNGLEQKLCNLQKSIY--------
Query: ---------------------------------------DDILLIRNDVGYLTDIKKWLAMEFQMKDLGDAQYVLGIQIVRNRKSRTLAMSQASYIDKML
DDILLI NDVG+L DIKKWLAM+FQMKDLG+AQYVLG+QIVRNRK++TLAMSQ SYIDKML
Subjt: ---------------------------------------DDILLIRNDVGYLTDIKKWLAMEFQMKDLGDAQYVLGIQIVRNRKSRTLAMSQASYIDKML
Query: SRYKMQNSKKGLLLYRYGIHLSKKQCPKTPQEVEDMRKFPYASAVGSLI-----------------------------------------TKDYMLVYGT
SRYKM NSKKGLL YRYGIHLSK+QCPKTPQEVEDM PYASAVGSL+ TKDYMLVYG+
Subjt: SRYKMQNSKKGLLLYRYGIHLSKKQCPKTPQEVEDMRKFPYASAVGSLI-----------------------------------------TKDYMLVYGT
Query: KDLILTGYTDSDFQTDRDARKSTSGSVFTLNGGAVVWRSVKQSCMTDSTMEAEYVAACKAAKEAVWLRKFLTDMEIVPNMHLPITLYCDNSGAVANSREP
KDLILTGYTD FQTD+DARKSTSG VFT+NGGAVVWRS+KQSC+ DSTMEAEYVA C+AAKEAVWL+KFLTD+E+VPNMHLP TLYCDNSGAV NSREP
Subjt: KDLILTGYTDSDFQTDRDARKSTSGSVFTLNGGAVVWRSVKQSCMTDSTMEAEYVAACKAAKEAVWLRKFLTDMEIVPNMHLPITLYCDNSGAVANSREP
Query: RSHKRGKHMERK
RSHKRGKH+ERK
Subjt: RSHKRGKHMERK
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| TYK29294.1 gag/pol protein [Cucumis melo var. makuwa] | 0.0 | 87.22 | Show/hide |
Query: MRPSWKVQTFKARLVAKGYTQREGVDYEETLSPVAMLKSIRILLFIATFYDYEIWQMDVKTAYLNENLEESIYMAQLEGFIKNGLEQKLCNLQKSIYDDI
MRPSWKVQTFKARLVAKGYTQREGVDYEETLSPVAMLKSIRILLFIATFYDYEIWQMDVKTAYLNENLEESIYMAQLEG
Subjt: MRPSWKVQTFKARLVAKGYTQREGVDYEETLSPVAMLKSIRILLFIATFYDYEIWQMDVKTAYLNENLEESIYMAQLEGFIKNGLEQKLCNLQKSIYDDI
Query: LLIRNDVGYLTDIKKWLAMEFQMKDLGDAQYVLGIQIVRNRKSRTLAMSQASYIDKMLSRYKMQNSKKGLLLYRYGIHLSKKQCPKTPQEVEDMRKFPYA
NDVGYLTDIKKWLAMEFQMKDLGDAQYVLGIQIVRNRKSRTLAMSQASYIDKMLSRYKMQNSKKGLLLYRYGIHLSKKQCPKTPQEVEDMRKFPYA
Subjt: LLIRNDVGYLTDIKKWLAMEFQMKDLGDAQYVLGIQIVRNRKSRTLAMSQASYIDKMLSRYKMQNSKKGLLLYRYGIHLSKKQCPKTPQEVEDMRKFPYA
Query: SAVGSLI-------------------TKDYMLVYGTKDLILTGYTDSDFQTDRDARKSTSGSVFTLNGGAVVWRSVKQSCMTDSTMEAEYVAACKAAKEA
SAVGSL+ TKDYMLVYGTKDLILTGYTDSDFQTDRDARKSTSGSVFTLNGGAVVWRSVKQSCMTDSTMEAEYVAACKAAKEA
Subjt: SAVGSLI-------------------TKDYMLVYGTKDLILTGYTDSDFQTDRDARKSTSGSVFTLNGGAVVWRSVKQSCMTDSTMEAEYVAACKAAKEA
Query: VWLRKFLTDMEIVPNMHLPITLYCDNSGAVANSREPRSHKRGKHMERKGRYFKSTPPRRPYRLPSKKPQVNVSKSSYLHVHAEFIAECVAEDVETAPSVS
VWLRKFLTDMEIVPNMHLPITLYCDNSGAVANSREPRSHKRGKHMERKGRYFKSTPPRRPYRLPSKKPQVNVSKSSYLHVHAEFIAECVAEDVETAPSVS
Subjt: VWLRKFLTDMEIVPNMHLPITLYCDNSGAVANSREPRSHKRGKHMERKGRYFKSTPPRRPYRLPSKKPQVNVSKSSYLHVHAEFIAECVAEDVETAPSVS
Query: ETHTTYMDFNERDDVPLARLLKKGLFSNVVPAKSVDPITSTHSHESSSYKDIFVPTPSHSPTTNEGAGQSGPSPLVKSSIQVDASITDHRLVPDSNPIDK
ETHTTYMDFNERDDVPLARLLKKGLFSNVVPAKSVDPITSTHSHESSSYKDIFVPTPSHSPTTNEGAGQSGPSPLVKSSIQVDASITDHRLVPDSNPIDK
Subjt: ETHTTYMDFNERDDVPLARLLKKGLFSNVVPAKSVDPITSTHSHESSSYKDIFVPTPSHSPTTNEGAGQSGPSPLVKSSIQVDASITDHRLVPDSNPIDK
Query: TTENVGRNDVPVDESIIIDAHVESTNTCATDTIEPDVNDELQPETQQSPGVSRPKGKKFQQNRRNITTKTRRKKIPSNIPSVPIDGISFHLEESVQRWKY
TTENVGRNDVPVDESIIIDAHVESTNTCATDTIEPDVNDELQPETQQSPGVSRPKGKKFQQNRRNITTKTRRKKIPSNIPSVPIDGISFHLEESVQRWKY
Subjt: TTENVGRNDVPVDESIIIDAHVESTNTCATDTIEPDVNDELQPETQQSPGVSRPKGKKFQQNRRNITTKTRRKKIPSNIPSVPIDGISFHLEESVQRWKY
Query: VVQRRIADEVNISDKHHSCLSIMGLIEKAGLFKTISNVGPFYPRLIRKFIVNFPSDFNDPSSLDYQTVHIRGLKFKINPAVINEFLVLTTLDAPRPEPKT
VVQRRIADEVNISDKHHSCLSIMGLIEKA VLTTLDAPRPEPKT
Subjt: VVQRRIADEVNISDKHHSCLSIMGLIEKAGLFKTISNVGPFYPRLIRKFIVNFPSDFNDPSSLDYQTVHIRGLKFKINPAVINEFLVLTTLDAPRPEPKT
Query: LSLSYRLFQGSHVLDIEHDMQPSRDPRIFDTEDLDEGAEGFFVHQNLASRIVNTLTAESRALSTSINLFSERRVEVDLFIRHLKTLTPSTSTGKHGLE
LSLSYRLFQGSHVLDIEHDMQPSRDPRIFDTEDLDEGAEGFFVHQNLASRIVNTLTAESRALSTSINLFSERRVEVDLFIRHLKTLTPSTSTGKHGLE
Subjt: LSLSYRLFQGSHVLDIEHDMQPSRDPRIFDTEDLDEGAEGFFVHQNLASRIVNTLTAESRALSTSINLFSERRVEVDLFIRHLKTLTPSTSTGKHGLE
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TZD0 Gag/pol protein | 7.2e-142 | 65.78 | Show/hide |
Query: KVQTFKARLVAKGYTQREGVDYEETLSPVAMLKSIRILLFIATFYDYEIWQMDVKTAYLNENLEESIYMAQLEGFIKNGLEQKLCNLQKSIY--------
KVQTFKARLVAKGYTQREGVDYEET SPVAMLKSIRILL IATFYDYEIWQMDVKTA+LN NLEESI+M+Q EGFI G EQK+C L +SIY
Subjt: KVQTFKARLVAKGYTQREGVDYEETLSPVAMLKSIRILLFIATFYDYEIWQMDVKTAYLNENLEESIYMAQLEGFIKNGLEQKLCNLQKSIY--------
Query: ---------------------------------------DDILLIRNDVGYLTDIKKWLAMEFQMKDLGDAQYVLGIQIVRNRKSRTLAMSQASYIDKML
DDILLI NDVGYLTD+K WLA +FQMKDLG+AQYVLGIQI+R+RK++TLA+SQA+YIDK+L
Subjt: ---------------------------------------DDILLIRNDVGYLTDIKKWLAMEFQMKDLGDAQYVLGIQIVRNRKSRTLAMSQASYIDKML
Query: SRYKMQNSKKGLLLYRYGIHLSKKQCPKTPQEVEDMRKFPYASAVGSLI-----------------------------------------TKDYMLVYGT
RY MQNSKKGLL +R+G+HLSK+Q PKTPQEVEDMR+ PYASAVGSL+ T+DYMLVYG
Subjt: SRYKMQNSKKGLLLYRYGIHLSKKQCPKTPQEVEDMRKFPYASAVGSLI-----------------------------------------TKDYMLVYGT
Query: KDLILTGYTDSDFQTDRDARKSTSGSVFTLNGGAVVWRSVKQSCMTDSTMEAEYVAACKAAKEAVWLRKFLTDMEIVPNMHLPITLYCDNSGAVANSREP
KDLILTGYTDSDFQTD+D+RKSTSGSVFTLNGGAVVWRS+KQ C+ DSTMEAEYVAAC+AAKEAVWLRKFL D+E+VPNM+LPITLYCDNSGAVANS+EP
Subjt: KDLILTGYTDSDFQTDRDARKSTSGSVFTLNGGAVVWRSVKQSCMTDSTMEAEYVAACKAAKEAVWLRKFLTDMEIVPNMHLPITLYCDNSGAVANSREP
Query: RSHKRGKHMERK
RSHKRGKH+ERK
Subjt: RSHKRGKHMERK
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| A0A5A7UYE8 Gag/pol protein | 7.2e-142 | 65.78 | Show/hide |
Query: KVQTFKARLVAKGYTQREGVDYEETLSPVAMLKSIRILLFIATFYDYEIWQMDVKTAYLNENLEESIYMAQLEGFIKNGLEQKLCNLQKSIY--------
KVQTFKARLVAKGYTQREGVDYEET SPVAMLKSIRILL IATFYDYEIWQMDVKTA+LN NLEESI+M+Q EGFI G EQK+C L +SIY
Subjt: KVQTFKARLVAKGYTQREGVDYEETLSPVAMLKSIRILLFIATFYDYEIWQMDVKTAYLNENLEESIYMAQLEGFIKNGLEQKLCNLQKSIY--------
Query: ---------------------------------------DDILLIRNDVGYLTDIKKWLAMEFQMKDLGDAQYVLGIQIVRNRKSRTLAMSQASYIDKML
DDILLI NDVGYLTD+K WLA +FQMKDLG+AQYVLGIQI+R+RK++TLA+SQA+YIDK+L
Subjt: ---------------------------------------DDILLIRNDVGYLTDIKKWLAMEFQMKDLGDAQYVLGIQIVRNRKSRTLAMSQASYIDKML
Query: SRYKMQNSKKGLLLYRYGIHLSKKQCPKTPQEVEDMRKFPYASAVGSLI-----------------------------------------TKDYMLVYGT
RY MQNSKKGLL +R+G+HLSK+Q PKTPQEVEDMR+ PYASAVGSL+ T+DYMLVYG
Subjt: SRYKMQNSKKGLLLYRYGIHLSKKQCPKTPQEVEDMRKFPYASAVGSLI-----------------------------------------TKDYMLVYGT
Query: KDLILTGYTDSDFQTDRDARKSTSGSVFTLNGGAVVWRSVKQSCMTDSTMEAEYVAACKAAKEAVWLRKFLTDMEIVPNMHLPITLYCDNSGAVANSREP
KDLILTGYTDSDFQTD+D+RKSTSGSVFTLNGGAVVWRS+KQ C+ DSTMEAEYVAAC+AAKEAVWLRKFL D+E+VPNM+LPITLYCDNSGAVANS+EP
Subjt: KDLILTGYTDSDFQTDRDARKSTSGSVFTLNGGAVVWRSVKQSCMTDSTMEAEYVAACKAAKEAVWLRKFLTDMEIVPNMHLPITLYCDNSGAVANSREP
Query: RSHKRGKHMERK
RSHKRGKH+ERK
Subjt: RSHKRGKHMERK
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| A0A5A7VE22 Gag/pol protein | 0.0e+00 | 79.56 | Show/hide |
Query: MRPSWKVQTFKARLVAKGYTQREGVDYEETLSPVAMLKSIRILLFIATFYDYEIWQMDVKTAYLNENLEESIYMAQLEGFIKNGLEQKLCNLQKSIYDDI
MRPSWKVQTFKARLVAKGYTQREGVDYEETLSPVAMLKSIRILLFIATFYDYEIWQMDVKTAYLNENLEESIYMAQLEG
Subjt: MRPSWKVQTFKARLVAKGYTQREGVDYEETLSPVAMLKSIRILLFIATFYDYEIWQMDVKTAYLNENLEESIYMAQLEGFIKNGLEQKLCNLQKSIYDDI
Query: LLIRNDVGYLTDIKKWLAMEFQMKDLGDAQYVLGIQIVRNRKSRTLAMSQASYIDKMLSRYKMQNSKKGLLLYRYGIHLSKKQCPKTPQEVEDMRKFPYA
NDVGYLTDIKKWLAMEFQMKDLGDAQYVLGIQIVRNRKSRTLAMSQASYIDKMLSRYKMQNSKKGLLLYRYGIHLSKKQCPKTPQEVEDMRKFPYA
Subjt: LLIRNDVGYLTDIKKWLAMEFQMKDLGDAQYVLGIQIVRNRKSRTLAMSQASYIDKMLSRYKMQNSKKGLLLYRYGIHLSKKQCPKTPQEVEDMRKFPYA
Query: SAVGSLI-------------------TKDYMLVYGTKDLILTGYTDSDFQTDRDARKSTSGSVFTLNGGAVVWRSVKQSCMTDSTMEAEYVAACKAAKEA
SAVGSL+ TKDYMLVYGTKDLILTGYTDSDFQTDRDARKS SGSVFTLNGGAVVWRSVKQSCMTDSTMEAEYVAACKAAKEA
Subjt: SAVGSLI-------------------TKDYMLVYGTKDLILTGYTDSDFQTDRDARKSTSGSVFTLNGGAVVWRSVKQSCMTDSTMEAEYVAACKAAKEA
Query: VWLRKFLTDMEIVPNMHLPITLYCDNSGAVANSREPRSHKRGKHMERK----------------------------------------------------
VWLRKFLTDMEIVPNMHLPITLYCDNSGAVANSREPRSHKRGKHMERK
Subjt: VWLRKFLTDMEIVPNMHLPITLYCDNSGAVANSREPRSHKRGKHMERK----------------------------------------------------
Query: ---------------------GRYFKSTPPRRPYRLPSKKPQVNVSKSSYLHVHAEFIAECVAEDVETAPSVSETHTTYMDFNERDDVPLARLLKKGLFS
GRYFKSTPPRRPYRLPSKKPQVNVSKSSYLHVHAEFIAECVAEDVETAPSVSETHTTYMDFNERDDVPLARLLKKGLFS
Subjt: ---------------------GRYFKSTPPRRPYRLPSKKPQVNVSKSSYLHVHAEFIAECVAEDVETAPSVSETHTTYMDFNERDDVPLARLLKKGLFS
Query: NVVPAKSVDPITSTHSHESSSYKDIFVPTPSHSPTTNEGAGQSGPSPLVKSSIQVDASITDHRLVPDSNPIDKTTENVGRNDVPVDESIIIDAHVESTNT
NVVPAKS+DPITSTHSHESSSYKDIFVPTPSHSPTTNEGAGQSGPSPLVKSSIQVDAS+TDHRLVPDSNPIDKTTENVGRNDVPVDESIIIDAHVESTNT
Subjt: NVVPAKSVDPITSTHSHESSSYKDIFVPTPSHSPTTNEGAGQSGPSPLVKSSIQVDASITDHRLVPDSNPIDKTTENVGRNDVPVDESIIIDAHVESTNT
Query: CATDTIEPDVNDELQPETQQSPGVSRPKGKKFQQNRRNITTKTRRKKIPSNIPSVPIDGISFHLEESVQRWKYVVQRRIADEVNISDKHHSCLSIMGLIE
CATDTIEPDVNDELQPETQQSPGVSRPKGKKFQQNRRNITTKTRRKKIPSNIPSVPIDGISFHLEESVQRWKYVVQRRIADEVNISDKHHSCLSIMGLIE
Subjt: CATDTIEPDVNDELQPETQQSPGVSRPKGKKFQQNRRNITTKTRRKKIPSNIPSVPIDGISFHLEESVQRWKYVVQRRIADEVNISDKHHSCLSIMGLIE
Query: KAGLFKTISNVGPFYPRLIRKFIVNFPSDFNDPSSLDYQTVHIRGLKFKINPAVINEFLVLTTLDAPRPEPKTLSLSYRLFQGSHVLDIEHDMQPSRDPR
KA VLTTLDAPRPEPKTLSLSYRLFQGSHVLDIEHDMQPSRDPR
Subjt: KAGLFKTISNVGPFYPRLIRKFIVNFPSDFNDPSSLDYQTVHIRGLKFKINPAVINEFLVLTTLDAPRPEPKTLSLSYRLFQGSHVLDIEHDMQPSRDPR
Query: IFDTEDLDEGAEGFFVHQNLASRIVNTLTAESRALSTSINLFSERRVEVDLFIRHLKTLTPSTSTGKHGLE
IFDTEDLDEGAEGFFVHQNLASRIVNTLTAESRALSTSINLFSERRVEVDLFIRHLKTLTPSTSTGKHGLE
Subjt: IFDTEDLDEGAEGFFVHQNLASRIVNTLTAESRALSTSINLFSERRVEVDLFIRHLKTLTPSTSTGKHGLE
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| A0A5D3E0G7 Gag/pol protein | 0.0e+00 | 87.22 | Show/hide |
Query: MRPSWKVQTFKARLVAKGYTQREGVDYEETLSPVAMLKSIRILLFIATFYDYEIWQMDVKTAYLNENLEESIYMAQLEGFIKNGLEQKLCNLQKSIYDDI
MRPSWKVQTFKARLVAKGYTQREGVDYEETLSPVAMLKSIRILLFIATFYDYEIWQMDVKTAYLNENLEESIYMAQLEG
Subjt: MRPSWKVQTFKARLVAKGYTQREGVDYEETLSPVAMLKSIRILLFIATFYDYEIWQMDVKTAYLNENLEESIYMAQLEGFIKNGLEQKLCNLQKSIYDDI
Query: LLIRNDVGYLTDIKKWLAMEFQMKDLGDAQYVLGIQIVRNRKSRTLAMSQASYIDKMLSRYKMQNSKKGLLLYRYGIHLSKKQCPKTPQEVEDMRKFPYA
NDVGYLTDIKKWLAMEFQMKDLGDAQYVLGIQIVRNRKSRTLAMSQASYIDKMLSRYKMQNSKKGLLLYRYGIHLSKKQCPKTPQEVEDMRKFPYA
Subjt: LLIRNDVGYLTDIKKWLAMEFQMKDLGDAQYVLGIQIVRNRKSRTLAMSQASYIDKMLSRYKMQNSKKGLLLYRYGIHLSKKQCPKTPQEVEDMRKFPYA
Query: SAVGSLI-------------------TKDYMLVYGTKDLILTGYTDSDFQTDRDARKSTSGSVFTLNGGAVVWRSVKQSCMTDSTMEAEYVAACKAAKEA
SAVGSL+ TKDYMLVYGTKDLILTGYTDSDFQTDRDARKSTSGSVFTLNGGAVVWRSVKQSCMTDSTMEAEYVAACKAAKEA
Subjt: SAVGSLI-------------------TKDYMLVYGTKDLILTGYTDSDFQTDRDARKSTSGSVFTLNGGAVVWRSVKQSCMTDSTMEAEYVAACKAAKEA
Query: VWLRKFLTDMEIVPNMHLPITLYCDNSGAVANSREPRSHKRGKHMERKGRYFKSTPPRRPYRLPSKKPQVNVSKSSYLHVHAEFIAECVAEDVETAPSVS
VWLRKFLTDMEIVPNMHLPITLYCDNSGAVANSREPRSHKRGKHMERKGRYFKSTPPRRPYRLPSKKPQVNVSKSSYLHVHAEFIAECVAEDVETAPSVS
Subjt: VWLRKFLTDMEIVPNMHLPITLYCDNSGAVANSREPRSHKRGKHMERKGRYFKSTPPRRPYRLPSKKPQVNVSKSSYLHVHAEFIAECVAEDVETAPSVS
Query: ETHTTYMDFNERDDVPLARLLKKGLFSNVVPAKSVDPITSTHSHESSSYKDIFVPTPSHSPTTNEGAGQSGPSPLVKSSIQVDASITDHRLVPDSNPIDK
ETHTTYMDFNERDDVPLARLLKKGLFSNVVPAKSVDPITSTHSHESSSYKDIFVPTPSHSPTTNEGAGQSGPSPLVKSSIQVDASITDHRLVPDSNPIDK
Subjt: ETHTTYMDFNERDDVPLARLLKKGLFSNVVPAKSVDPITSTHSHESSSYKDIFVPTPSHSPTTNEGAGQSGPSPLVKSSIQVDASITDHRLVPDSNPIDK
Query: TTENVGRNDVPVDESIIIDAHVESTNTCATDTIEPDVNDELQPETQQSPGVSRPKGKKFQQNRRNITTKTRRKKIPSNIPSVPIDGISFHLEESVQRWKY
TTENVGRNDVPVDESIIIDAHVESTNTCATDTIEPDVNDELQPETQQSPGVSRPKGKKFQQNRRNITTKTRRKKIPSNIPSVPIDGISFHLEESVQRWKY
Subjt: TTENVGRNDVPVDESIIIDAHVESTNTCATDTIEPDVNDELQPETQQSPGVSRPKGKKFQQNRRNITTKTRRKKIPSNIPSVPIDGISFHLEESVQRWKY
Query: VVQRRIADEVNISDKHHSCLSIMGLIEKAGLFKTISNVGPFYPRLIRKFIVNFPSDFNDPSSLDYQTVHIRGLKFKINPAVINEFLVLTTLDAPRPEPKT
VVQRRIADEVNISDKHHSCLSIMGLIEKA VLTTLDAPRPEPKT
Subjt: VVQRRIADEVNISDKHHSCLSIMGLIEKAGLFKTISNVGPFYPRLIRKFIVNFPSDFNDPSSLDYQTVHIRGLKFKINPAVINEFLVLTTLDAPRPEPKT
Query: LSLSYRLFQGSHVLDIEHDMQPSRDPRIFDTEDLDEGAEGFFVHQNLASRIVNTLTAESRALSTSINLFSERRVEVDLFIRHLKTLTPSTSTGKHGLE
LSLSYRLFQGSHVLDIEHDMQPSRDPRIFDTEDLDEGAEGFFVHQNLASRIVNTLTAESRALSTSINLFSERRVEVDLFIRHLKTLTPSTSTGKHGLE
Subjt: LSLSYRLFQGSHVLDIEHDMQPSRDPRIFDTEDLDEGAEGFFVHQNLASRIVNTLTAESRALSTSINLFSERRVEVDLFIRHLKTLTPSTSTGKHGLE
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| E2GK51 Gag/pol protein (Fragment) | 4.5e-144 | 67.23 | Show/hide |
Query: KVQTFKARLVAKGYTQREGVDYEETLSPVAMLKSIRILLFIATFYDYEIWQMDVKTAYLNENLEESIYMAQLEGFIKNGLEQKLCNLQKSIY--------
KVQTFKARLVAKGYTQ+EGVDYEET SPVAMLKSIRILL IATFY+YEIWQMDVKTA+LN NLEESIYM Q EGFI EQK+C LQKSIY
Subjt: KVQTFKARLVAKGYTQREGVDYEETLSPVAMLKSIRILLFIATFYDYEIWQMDVKTAYLNENLEESIYMAQLEGFIKNGLEQKLCNLQKSIY--------
Query: ---------------------------------------DDILLIRNDVGYLTDIKKWLAMEFQMKDLGDAQYVLGIQIVRNRKSRTLAMSQASYIDKML
DDILLI NDV YLTD+KKWL +FQMKDLG+AQY+LGIQIVRNRK++TLAMSQASYIDK+L
Subjt: ---------------------------------------DDILLIRNDVGYLTDIKKWLAMEFQMKDLGDAQYVLGIQIVRNRKSRTLAMSQASYIDKML
Query: SRYKMQNSKKGLLLYRYGIHLSKKQCPKTPQEVEDMRKFPYASAVGSLI-----------------------------------------TKDYMLVYGT
SRYKMQNSKKG L +R+GIHLSK+QCPKTPQEVEDMR PY+SAVGSL+ T++YMLVYG
Subjt: SRYKMQNSKKGLLLYRYGIHLSKKQCPKTPQEVEDMRKFPYASAVGSLI-----------------------------------------TKDYMLVYGT
Query: KDLILTGYTDSDFQTDRDARKSTSGSVFTLNGGAVVWRSVKQSCMTDSTMEAEYVAACKAAKEAVWLRKFLTDMEIVPNMHLPITLYCDNSGAVANSREP
KDLILTGYTDSDFQ+D+DARKSTSGSVFTLNGGAVVWRSVKQ+C+ DSTMEAEYVAAC+AAKEAVWLRKFLTD+E+VPNMHLPITLYCDNSGAVANS+EP
Subjt: KDLILTGYTDSDFQTDRDARKSTSGSVFTLNGGAVVWRSVKQSCMTDSTMEAEYVAACKAAKEAVWLRKFLTDMEIVPNMHLPITLYCDNSGAVANSREP
Query: RSHKRGKHMERK
RSHKRGKH+ERK
Subjt: RSHKRGKHMERK
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 8.7e-36 | 27.74 | Show/hide |
Query: FKARLVAKGYTQREGVDYEETLSPVAMLKSIRILLFIATFYDYEIWQMDVKTAYLNENLEESIYMAQLEGFIKNGLEQKLCNLQKSIY------------
+KARLVA+G+TQ+ +DYEET +PVA + S R +L + Y+ ++ QMDVKTA+LN L+E IYM +G N +C L K+IY
Subjt: FKARLVAKGYTQREGVDYEETLSPVAMLKSIRILLFIATFYDYEIWQMDVKTAYLNENLEESIYMAQLEGFIKNGLEQKLCNLQKSIY------------
Query: -------------------------------------DDILLIRNDVGYLTDIKKWLAMEFQMKDLGDAQYVLGIQIVRNRKSRTLAMSQASYIDKMLSR
DD+++ D+ + + K++L +F+M DL + ++ +GI+I + + +SQ++Y+ K+LS+
Subjt: -------------------------------------DDILLIRNDVGYLTDIKKWLAMEFQMKDLGDAQYVLGIQIVRNRKSRTLAMSQASYIDKMLSR
Query: YKMQN----------------------------SKKGLLLY---------RYGIHLSKKQCPKTPQEVEDMRKFPYASAVGSLITKDYMLVYGTKDLI--
+ M+N S G L+Y +++ + K E+ K G++ D L++ K+L
Subjt: YKMQN----------------------------SKKGLLLY---------RYGIHLSKKQCPKTPQEVEDMRKFPYASAVGSLITKDYMLVYGTKDLI--
Query: --LTGYTDSDFQTDRDARKSTSGSVFTL-NGGAVVWRSVKQSCMTDSTMEAEYVAACKAAKEAVWLRKFLTDMEIVPNMHLPITLYCDNSGAVANSREPR
+ GY DSD+ RKST+G +F + + + W + +Q+ + S+ EAEY+A +A +EA+WL+ LT + I + PI +Y DN G ++ + P
Subjt: --LTGYTDSDFQTDRDARKSTSGSVFTL-NGGAVVWRSVKQSCMTDSTMEAEYVAACKAAKEAVWLRKFLTDMEIVPNMHLPITLYCDNSGAVANSREPR
Query: SHKRGKHMERK
HKR KH++ K
Subjt: SHKRGKHMERK
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| P0CV72 Secreted RxLR effector protein 161 | 6.3e-10 | 52.38 | Show/hide |
Query: LTGYTDSDFQTDRDARKSTSGSVFTLNGGAVVWRSVKQSCMTDSTMEAEYVAACKAAKEAVWL
L GY+D+D+ D ++R+STSG +F LNGG V WRS KQ + S+ E EY+A +A +EAVWL
Subjt: LTGYTDSDFQTDRDARKSTSGSVFTLNGGAVVWRSVKQSCMTDSTMEAEYVAACKAAKEAVWL
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.6e-61 | 35.28 | Show/hide |
Query: KVQTFKARLVAKGYTQREGVDYEETLSPVAMLKSIRILLFIATFYDYEIWQMDVKTAYLNENLEESIYMAQLEGFIKNGLEQKLCNLQKSIY--------
K+ +KARLV KG+ Q++G+D++E SPV + SIR +L +A D E+ Q+DVKTA+L+ +LEE IYM Q EGF G + +C L KS+Y
Subjt: KVQTFKARLVAKGYTQREGVDYEETLSPVAMLKSIRILLFIATFYDYEIWQMDVKTAYLNENLEESIYMAQLEGFIKNGLEQKLCNLQKSIY--------
Query: ----------------------------------------DDILLIRNDVGYLTDIKKWLAMEFQMKDLGDAQYVLGIQIVRNRKSRTLAMSQASYIDKM
DD+L++ D G + +K L+ F MKDLG AQ +LG++IVR R SR L +SQ YI+++
Subjt: ----------------------------------------DDILLIRNDVGYLTDIKKWLAMEFQMKDLGDAQYVLGIQIVRNRKSRTLAMSQASYIDKM
Query: LSRYKMQNSKKGLLLYRYGIHLSKKQCPKTPQEVEDMRKFPYASAVGSLI-----------------------------------------TKDYMLVYG
L R+ M+N+K + LSKK CP T +E +M K PY+SAVGSL+ T L +G
Subjt: LSRYKMQNSKKGLLLYRYGIHLSKKQCPKTPQEVEDMRKFPYASAVGSLI-----------------------------------------TKDYMLVYG
Query: TKDLILTGYTDSDFQTDRDARKSTSGSVFTLNGGAVVWRSVKQSCMTDSTMEAEYVAACKAAKEAVWLRKFLTDMEIVPNMHLPITLYCDNSGAVANSRE
D IL GYTD+D D D RKS++G +FT +GGA+ W+S Q C+ ST EAEY+AA + KE +WL++FL ++ + ++ +YCD+ A+ S+
Subjt: TKDLILTGYTDSDFQTDRDARKSTSGSVFTLNGGAVVWRSVKQSCMTDSTMEAEYVAACKAAKEAVWLRKFLTDMEIVPNMHLPITLYCDNSGAVANSRE
Query: PRSHKRGKHME
H R KH++
Subjt: PRSHKRGKHME
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 3.1e-17 | 32.68 | Show/hide |
Query: FKARLVAKGYTQREGVDYEETLSPVAMLKSIRILLFIATFYDYEIWQMDVKTAYLNENLEESIYMAQLEGFIKNGLEQKLCNLQKSIY------------
+KARLVAKGY QR G+DY ET SPV SIRI+L +A + I Q+DV A+L L + +YM+Q GFI +C L+K++Y
Subjt: FKARLVAKGYTQREGVDYEETLSPVAMLKSIRILLFIATFYDYEIWQMDVKTAYLNENLEESIYMAQLEGFIKNGLEQKLCNLQKSIY------------
Query: -----------------------------------DDILLIRNDVGYLTDIKKWLAMEFQMKDLGDAQYVLGIQIVRNRKSRTLAMSQASYIDKMLSRYK
DDIL+ ND L + L+ F +KD + Y LGI+ R L +SQ YI +L+R
Subjt: -----------------------------------DDILLIRNDVGYLTDIKKWLAMEFQMKDLGDAQYVLGIQIVRNRKSRTLAMSQASYIDKMLSRYK
Query: MQNSK
M +K
Subjt: MQNSK
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.4e-17 | 30.74 | Show/hide |
Query: FKARLVAKGYTQREGVDYEETLSPVAMLKSIRILLFIATFYDYEIWQMDVKTAYLNENLEESIYMAQLEGFIKNGLEQKLCNLQKSIY------------
+KARLVAKGY QR G+DY ET SPV SIRI+L +A + I Q+DV A+L L + +YM+Q GF+ +C L+K+IY
Subjt: FKARLVAKGYTQREGVDYEETLSPVAMLKSIRILLFIATFYDYEIWQMDVKTAYLNENLEESIYMAQLEGFIKNGLEQKLCNLQKSIY------------
Query: -----------------------------------DDILLIRNDVGYLTDIKKWLAMEFQMKDLGDAQYVLGIQIVRNRKSRTLAMSQASYIDKMLSRYK
DDIL+ ND L L+ F +K+ D Y LGI+ R + L +SQ Y +L+R
Subjt: -----------------------------------DDILLIRNDVGYLTDIKKWLAMEFQMKDLGDAQYVLGIQIVRNRKSRTLAMSQASYIDKMLSRYK
Query: MQNSKKGLLLYRYGIHLSKKQCPKTPQEVEDMRKFPYASAVGSL
M +K L+ K P E Y VGSL
Subjt: MQNSKKGLLLYRYGIHLSKKQCPKTPQEVEDMRKFPYASAVGSL
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