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IVF0017276 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0017276
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr08:15394951..15395277
RNA-Seq ExpressionIVF0017276
SyntenyIVF0017276
Gene Ontology termsGO:0008152 - metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056006.1 A-kinase anchor protein 12 [Cucumis melo var. makuwa]2.34e-4266.95Show/hide
Query:  KRKEFLSLKQGDMTITEYERKFTKLAKYAMSYVVDEEEKCKHFDEGLRTTILVPMTASTNWSIFSKLAE-----------EKKSSKEKRLSKEPMRMGVA
        K K+FLSLKQGDM ITEYERKF K+AKYAMSYVVDE+EK K F EGLRTTI +P+T+STNW   S+L E           EKKSSKEKRL KEPM+  V 
Subjt:  KRKEFLSLKQGDMTITEYERKFTKLAKYAMSYVVDEEEKCKHFDEGLRTTILVPMTASTNWSIFSKLAE-----------EKKSSKEKRLSKEPMRMGVA

Query:  SHFVHQVSQGGPTRDKGK
        S+ VHQVS+GGP  DKGK
Subjt:  SHFVHQVSQGGPTRDKGK

KAA0056157.1 uncharacterized protein E6C27_scaffold697G00470 [Cucumis melo var. makuwa]3.26e-6796.3Show/hide
Query:  MKRKEFLSLKQGDMTITEYERKFTKLAKYAMSYVVDEEEKCKHFDEGLRTTILVPMTASTNWSIFSKLAEEKKSSKEKRLSKEPMRMGVASHFVHQVSQG
        MKRKEFLSLKQGDMTITEYERKFTKLAKYAMSYVVDEEEKCKHFDEGLRTTILVPMTASTNWS FSKL EEKKSSKEKR SKEPMRMGVASH VHQVSQG
Subjt:  MKRKEFLSLKQGDMTITEYERKFTKLAKYAMSYVVDEEEKCKHFDEGLRTTILVPMTASTNWSIFSKLAEEKKSSKEKRLSKEPMRMGVASHFVHQVSQG

Query:  GPTRDKGK
        GPTRDKGK
Subjt:  GPTRDKGK

KAA0062867.1 zf-CCHC domain-containing protein [Cucumis melo var. makuwa]3.20e-2764.77Show/hide
Query:  KFTKLAKYAMSYVVDEEEKCKHFDEGLRTTILVPMTASTNWSIFSKL-----------AEEKKSSKEKRLSKEPMRMGVASHFVHQVS
        KFTKLAKY  SYVVDE+EKCK F++GLR  I VPM A TNW  FSKL           AEEKKS +EKRLSKEP RM VASH +H+VS
Subjt:  KFTKLAKYAMSYVVDEEEKCKHFDEGLRTTILVPMTASTNWSIFSKL-----------AEEKKSSKEKRLSKEPMRMGVASHFVHQVS

TYK11094.1 uncharacterized protein E5676_scaffold73G00880 [Cucumis melo var. makuwa]2.04e-70100Show/hide
Query:  MKRKEFLSLKQGDMTITEYERKFTKLAKYAMSYVVDEEEKCKHFDEGLRTTILVPMTASTNWSIFSKLAEEKKSSKEKRLSKEPMRMGVASHFVHQVSQG
        MKRKEFLSLKQGDMTITEYERKFTKLAKYAMSYVVDEEEKCKHFDEGLRTTILVPMTASTNWSIFSKLAEEKKSSKEKRLSKEPMRMGVASHFVHQVSQG
Subjt:  MKRKEFLSLKQGDMTITEYERKFTKLAKYAMSYVVDEEEKCKHFDEGLRTTILVPMTASTNWSIFSKLAEEKKSSKEKRLSKEPMRMGVASHFVHQVSQG

Query:  GPTRDKGK
        GPTRDKGK
Subjt:  GPTRDKGK

TYK27694.1 A-kinase anchor protein 12 [Cucumis melo var. makuwa]4.36e-4569.49Show/hide
Query:  KRKEFLSLKQGDMTITEYERKFTKLAKYAMSYVVDEEEKCKHFDEGLRTTILVPMTASTNWSIFSKLAE-----------EKKSSKEKRLSKEPMRMGVA
        KRK+FLSLKQGDM ITEYERKF K+AKYAMSYVVDE+EK KHF EGLRTTI +P+T+STNW   S+L E           EKKSSKEKRL KEPM+  VA
Subjt:  KRKEFLSLKQGDMTITEYERKFTKLAKYAMSYVVDEEEKCKHFDEGLRTTILVPMTASTNWSIFSKLAE-----------EKKSSKEKRLSKEPMRMGVA

Query:  SHFVHQVSQGGPTRDKGK
        S+ VHQVS+GGP  DKGK
Subjt:  SHFVHQVSQGGPTRDKGK

TrEMBL top hitse value%identityAlignment
A0A5A7UNH7 Retrotrans_gag domain-containing protein3.4e-5096.3Show/hide
Query:  MKRKEFLSLKQGDMTITEYERKFTKLAKYAMSYVVDEEEKCKHFDEGLRTTILVPMTASTNWSIFSKLAEEKKSSKEKRLSKEPMRMGVASHFVHQVSQG
        MKRKEFLSLKQGDMTITEYERKFTKLAKYAMSYVVDEEEKCKHFDEGLRTTILVPMTASTNWS FSKL EEKKSSKEKR SKEPMRMGVASH VHQVSQG
Subjt:  MKRKEFLSLKQGDMTITEYERKFTKLAKYAMSYVVDEEEKCKHFDEGLRTTILVPMTASTNWSIFSKLAEEKKSSKEKRLSKEPMRMGVASHFVHQVSQG

Query:  GPTRDKGK
        GPTRDKGK
Subjt:  GPTRDKGK

A0A5A7UNY4 A-kinase anchor protein 124.2e-3266.95Show/hide
Query:  KRKEFLSLKQGDMTITEYERKFTKLAKYAMSYVVDEEEKCKHFDEGLRTTILVPMTASTNWSIFSK-----------LAEEKKSSKEKRLSKEPMRMGVA
        K K+FLSLKQGDM ITEYERKF K+AKYAMSYVVDE+EK K F EGLRTTI +P+T+STNW   S+           LA+EKKSSKEKRL KEPM+  V 
Subjt:  KRKEFLSLKQGDMTITEYERKFTKLAKYAMSYVVDEEEKCKHFDEGLRTTILVPMTASTNWSIFSK-----------LAEEKKSSKEKRLSKEPMRMGVA

Query:  SHFVHQVSQGGPTRDKGK
        S+ VHQVS+GGP  DKGK
Subjt:  SHFVHQVSQGGPTRDKGK

A0A5A7V7B0 Zf-CCHC domain-containing protein3.7e-2064.77Show/hide
Query:  KFTKLAKYAMSYVVDEEEKCKHFDEGLRTTILVPMTASTNWSIFSK-----------LAEEKKSSKEKRLSKEPMRMGVASHFVHQVS
        KFTKLAKY  SYVVDE+EKCK F++GLR  I VPM A TNW  FSK           LAEEKKS +EKRLSKEP RM VASH +H+VS
Subjt:  KFTKLAKYAMSYVVDEEEKCKHFDEGLRTTILVPMTASTNWSIFSK-----------LAEEKKSSKEKRLSKEPMRMGVASHFVHQVS

A0A5D3CIT6 Retrotrans_gag domain-containing protein1.2e-52100Show/hide
Query:  MKRKEFLSLKQGDMTITEYERKFTKLAKYAMSYVVDEEEKCKHFDEGLRTTILVPMTASTNWSIFSKLAEEKKSSKEKRLSKEPMRMGVASHFVHQVSQG
        MKRKEFLSLKQGDMTITEYERKFTKLAKYAMSYVVDEEEKCKHFDEGLRTTILVPMTASTNWSIFSKLAEEKKSSKEKRLSKEPMRMGVASHFVHQVSQG
Subjt:  MKRKEFLSLKQGDMTITEYERKFTKLAKYAMSYVVDEEEKCKHFDEGLRTTILVPMTASTNWSIFSKLAEEKKSSKEKRLSKEPMRMGVASHFVHQVSQG

Query:  GPTRDKGK
        GPTRDKGK
Subjt:  GPTRDKGK

A0A5D3DW18 A-kinase anchor protein 123.4e-3469.49Show/hide
Query:  KRKEFLSLKQGDMTITEYERKFTKLAKYAMSYVVDEEEKCKHFDEGLRTTILVPMTASTNWSIFSK-----------LAEEKKSSKEKRLSKEPMRMGVA
        KRK+FLSLKQGDM ITEYERKF K+AKYAMSYVVDE+EK KHF EGLRTTI +P+T+STNW   S+           LA+EKKSSKEKRL KEPM+  VA
Subjt:  KRKEFLSLKQGDMTITEYERKFTKLAKYAMSYVVDEEEKCKHFDEGLRTTILVPMTASTNWSIFSK-----------LAEEKKSSKEKRLSKEPMRMGVA

Query:  SHFVHQVSQGGPTRDKGK
        S+ VHQVS+GGP  DKGK
Subjt:  SHFVHQVSQGGPTRDKGK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAGGAAGGAGTTTCTAAGTTTAAAACAAGGCGATATGACCATTACTGAATATGAGAGAAAATTCACAAAGCTCGCAAAGTATGCGATGTCCTATGTAGTGGATGA
AGAAGAAAAGTGCAAGCATTTCGACGAAGGTTTAAGGACGACCATTCTAGTGCCAATGACGGCAAGCACAAATTGGTCAATCTTCTCTAAGTTGGCTGAGGAAAAGAAGA
GTTCTAAAGAGAAGAGATTGAGTAAGGAACCTATGCGAATGGGAGTAGCTTCTCACTTTGTTCATCAAGTATCTCAAGGAGGTCCTACACGGGATAAAGGAAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGAGGAAGGAGTTTCTAAGTTTAAAACAAGGCGATATGACCATTACTGAATATGAGAGAAAATTCACAAAGCTCGCAAAGTATGCGATGTCCTATGTAGTGGATGA
AGAAGAAAAGTGCAAGCATTTCGACGAAGGTTTAAGGACGACCATTCTAGTGCCAATGACGGCAAGCACAAATTGGTCAATCTTCTCTAAGTTGGCTGAGGAAAAGAAGA
GTTCTAAAGAGAAGAGATTGAGTAAGGAACCTATGCGAATGGGAGTAGCTTCTCACTTTGTTCATCAAGTATCTCAAGGAGGTCCTACACGGGATAAAGGAAAGTAG
Protein sequenceShow/hide protein sequence
MKRKEFLSLKQGDMTITEYERKFTKLAKYAMSYVVDEEEKCKHFDEGLRTTILVPMTASTNWSIFSKLAEEKKSSKEKRLSKEPMRMGVASHFVHQVSQGGPTRDKGK