CuGenDBv2

Gene ID	IVF0017308
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	cytochrome c oxidase subunit 6a, mitochondrial
Genome location	chr06:15501588..15506833
RNA-Seq Expression	IVF0017308
Synteny	IVF0017308
Gene Ontology terms	GO:0006123 - mitochondrial electron transport, cytochrome c to oxygen (biological process) GO:0050790 - regulation of catalytic activity (biological process) GO:1902600 - proton transmembrane transport (biological process) GO:0005751 - mitochondrial respiratory chain complex IV (cellular component) GO:0004129 - cytochrome-c oxidase activity (molecular function) GO:0030234 - enzyme regulator activity (molecular function)
InterPro domains	IPR001349 - Cytochrome c oxidase, subunit VIa IPR036418 - Cytochrome c oxidase, subunit VIa superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008450167.1 PREDICTED: cytochrome c oxidase subunit 6a, mitochondrial [Cucumis melo]

3.70e-66

100

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Query:  MAMASIRSNFLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
        MAMASIRSNFLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
Subjt:  MAMASIRSNFLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH

XP_011650608.1 cytochrome c oxidase subunit 6a, mitochondrial isoform X2 [Cucumis sativus]

6.15e-65

97.96

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Query:  MAMASIRSNFLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
        MAMASIRSN LRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPY+HIRNKEFPWGPDGLFEVKHH
Subjt:  MAMASIRSNFLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH

XP_022929363.1 cytochrome c oxidase subunit 6a, mitochondrial-like [Cucurbita moschata]

4.88e-62

93.88

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Query:  MAMASIRSNFLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
        MAMA+IRSN LRAA RGASRNS QPKRGFASSAHDDARETAKWEKITYAGIV+CSILAFYNLSKGHPH+EEPPAYPYLHIRNKEFPWGPDGLFEVKHH
Subjt:  MAMASIRSNFLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH

XP_023551866.1 cytochrome c oxidase subunit 6a, mitochondrial-like [Cucurbita pepo subsp. pepo]

1.20e-62

94.9

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Query:  MAMASIRSNFLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
        MAMA+IRSN LRAALRGASRNS QPKRGFASSAHDDARETAKWEKITYAGIV+CSILAFYNLSKGHPH+EEPPAYPYLHIRNKEFPWGPDGLFEVKHH
Subjt:  MAMASIRSNFLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH

XP_038905594.1 cytochrome c oxidase subunit 6a, mitochondrial [Benincasa hispida]

4.17e-63

94.9

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Query:  MAMASIRSNFLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
        MAMASIRSN LRAA+RGASRNS QPKRGFASSAHDDARETAKWEKITYAGI TC+ILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
Subjt:  MAMASIRSNFLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L3I0 Uncharacterized protein

1.7e-48

97.92

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Query:  MASIRSNFLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
        MASIRSN LRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPY+HIRNKEFPWGPDGLFEVKHH
Subjt:  MASIRSNFLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH

A0A1S3BPM0 cytochrome c oxidase subunit 6a, mitochondrial

2.4e-50

100

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Query:  MAMASIRSNFLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
        MAMASIRSNFLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
Subjt:  MAMASIRSNFLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH

A0A6J1ERW3 cytochrome c oxidase subunit 6a, mitochondrial-like

3.2e-47

93.88

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Query:  MAMASIRSNFLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
        MAMA+IRSN LRAA RGASRNS QPKRGFASSAHDDARETAKWEKITYAGIV+CSILAFYNLSKGHPH+EEPPAYPYLHIRNKEFPWGPDGLFEVKHH
Subjt:  MAMASIRSNFLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH

A0A6J1J8L1 cytochrome c oxidase subunit 6a, mitochondrial-like

2.1e-46

92.86

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Query:  MAMASIRSNFLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
        MAMA IRSN LRAA RGASRN  QPKRGFASSAHDDARETAKWEKITYAGIV+CSILAFYNLSKGHPH+EEPPAYPYLHIRNKEFPWGPDGLFEVKHH
Subjt:  MAMASIRSNFLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH

A0A6J1KMD3 cytochrome c oxidase subunit 6a, mitochondrial-like

7.8e-46

90.82

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Query:  MAMASIRSNFLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
        MAMA+IRSN LRAA+RGASRNS QPKRGFASSAHDDA ETAKWEKITYAGI  C+ LAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
Subjt:  MAMASIRSNFLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH

SwissProt top hits

e value

%identity

Alignment

Q9T070 Cytochrome c oxidase subunit 6a, mitochondrial

9.6e-33

68.69

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Query:  MAMASIRSNFLRAALRGASRNSVQPKRGFASSA-HDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
        MA A +RS   RA  R A + SV PKR F+SSA HDDA E AKWEKITY GI +C+ LA Y LSKGH H E+PPAYP++HIRNKEFPWGPDGLFEVKH+
Subjt:  MAMASIRSNFLRAALRGASRNSVQPKRGFASSA-HDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH

Arabidopsis top hits

e value

%identity

Alignment

AT4G37830.1 cytochrome c oxidase-related

6.8e-34

68.69

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Query:  MAMASIRSNFLRAALRGASRNSVQPKRGFASSA-HDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
        MA A +RS   RA  R A + SV PKR F+SSA HDDA E AKWEKITY GI +C+ LA Y LSKGH H E+PPAYP++HIRNKEFPWGPDGLFEVKH+
Subjt:  MAMASIRSNFLRAALRGASRNSVQPKRGFASSA-HDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH

AT4G37830.2 cytochrome c oxidase-related

1.2e-25

60.61

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Query:  MAMASIRSNFLRAALRGASRNSVQPKRGFASSA-HDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
        MA A +RS   RA  R A + SV PKR F+SSA HDDA E AKWEKITY GI +C+ LA Y LSKGH H E+PP          EFPWGPDGLFEVKH+
Subjt:  MAMASIRSNFLRAALRGASRNSVQPKRGFASSA-HDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH

Sequences

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CDS sequence

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ATGGCAATGGCGTCGATCCGATCCAATTTTCTTCGCGCCGCCCTACGCGGTGCCTCTCGAAACTCCGTTCAGCCTAAACGCGGCTTTGCTTCCTCTGCTCACGACGACGC
TCGTGAAACGGCAAAGTGGGAGAAGATTACTTATGCTGGCATTGTAACCTGCTCTATTTTAGCATTCTATAATTTATCAAAGGGGCACCCCCACCATGAAGAGCCCCCTG
CATATCCATATTTGCACATACGCAATAAAGAGTTCCCTTGGGGTCCTGATGGTCTCTTTGAGGTGAAGCACCACTAA

mRNA sequence

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GTTTGGTCATTTCGTGGACTCGGCAATTTGTGAGAGAGAATCAAAGAGAAAATGGCAATGGCGTCGATCCGATCCAATTTTCTTCGCGCCGCCCTACGCGGTGCCTCTCG
AAACTCCGTTCAGCCTAAACGCGGCTTTGCTTCCTCTGCTCACGACGACGCTCGTGAAACGGCAAAGTGGGAGAAGATTACTTATGCTGGCATTGTAACCTGCTCTATTT
TAGCATTCTATAATTTATCAAAGGGGCACCCCCACCATGAAGAGCCCCCTGCATATCCATATTTGCACATACGCAATAAAGAGTTCCCTTGGGGTCCTGATGGTCTCTTT
GAGGTGAAGCACCACTAAGGATTACTTTTGGGTTCAAAAGCGCATCAGAGTTCTCATTCTGTTCCATATCAGAAAAGACTTCATGGACTGGTTGGTTTAGATTTTTTCTC
TGCAAAGGAAAAGCCATGGCATGGCTATTTTGCATTTGTTAAAATGCTATCAGAATATTATGTGAATCATGGTTTGAAGTTCTTTTTTTTGTCACAGCCTTCCTTCCTGA
TTAATAAGATAAAATTTCTTCCCATTGTGCTAAAAGGTCTGCAGTAAGCTTTGGTTGGGTTGAAAAATGAGCTTCTATAACTTCTGGTACTTGATGGGTAATAATTGTTA
CTTTGGTGAACTGAAACAATTGCTAGGTGTTATCAACACAGTTGGATCATTCTCATAAGTTTGGTTTGTATTTTTAAAAAAATGG

Protein sequence

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MAMASIRSNFLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH

IVF0017308 (gene) of Melon (IVF77) v1 genome