; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0017334 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0017334
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionprotein DCL, chloroplastic
Genome locationchr07:2239862..2242408
RNA-Seq ExpressionIVF0017334
SyntenyIVF0017334
Gene Ontology termsGO:0009658 - chloroplast organization (biological process)
GO:1901259 - chloroplast rRNA processing (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR044673 - Protein DCL-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064386.1 protein DCL [Cucumis melo var. makuwa]5.12e-163100Show/hide
Query:  MAMASILTLLPFPPFHSLNPNFFNSSPLILCFPTHPINSFHPSTRALKTGPEGSRIRSHQEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDEEEEVD
        MAMASILTLLPFPPFHSLNPNFFNSSPLILCFPTHPINSFHPSTRALKTGPEGSRIRSHQEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDEEEEVD
Subjt:  MAMASILTLLPFPPFHSLNPNFFNSSPLILCFPTHPINSFHPSTRALKTGPEGSRIRSHQEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDEEEEVD

Query:  WVDWEDKILEDTVPLVGFVRMVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
        WVDWEDKILEDTVPLVGFVRMVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
Subjt:  WVDWEDKILEDTVPLVGFVRMVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI

Query:  RKNYPLYAESFILRHFRRRRRNLRR
        RKNYPLYAESFILRHFRRRRRNLRR
Subjt:  RKNYPLYAESFILRHFRRRRRNLRR

XP_004141259.1 protein DCL homolog, chloroplastic [Cucumis sativus]4.09e-15494.22Show/hide
Query:  MAMASILTLLPFPPFHSLNPNFFNSSPLILCFPTHPINSFHPSTRALKTGPEGSRIRSHQEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDEEEEVD
        MAMASIL   PFPPFHSLNPNFFNSSPLILCFPTHPINSFHPSTRALKTGPEG R+RSHQEYSSDLLRKPV P AKDLAGPSEDDDSSEESGN++EEEV+
Subjt:  MAMASILTLLPFPPFHSLNPNFFNSSPLILCFPTHPINSFHPSTRALKTGPEGSRIRSHQEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDEEEEVD

Query:  WVDWEDKILEDTVPLVGFVRMVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
        WVDWEDKILEDTVPLVGFVRMVLHTGKYE+GDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFIVRKDGE+VDFSYWKCIKGLI
Subjt:  WVDWEDKILEDTVPLVGFVRMVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI

Query:  RKNYPLYAESFILRHFRRRRRNLRR
        RKNYPLYAESFILRHFRRRRRN RR
Subjt:  RKNYPLYAESFILRHFRRRRRNLRR

XP_008452556.1 PREDICTED: protein DCL, chloroplastic [Cucumis melo]5.02e-164100Show/hide
Query:  MAMASILTLLPFPPFHSLNPNFFNSSPLILCFPTHPINSFHPSTRALKTGPEGSRIRSHQEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDEEEEVD
        MAMASILTLLPFPPFHSLNPNFFNSSPLILCFPTHPINSFHPSTRALKTGPEGSRIRSHQEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDEEEEVD
Subjt:  MAMASILTLLPFPPFHSLNPNFFNSSPLILCFPTHPINSFHPSTRALKTGPEGSRIRSHQEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDEEEEVD

Query:  WVDWEDKILEDTVPLVGFVRMVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
        WVDWEDKILEDTVPLVGFVRMVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
Subjt:  WVDWEDKILEDTVPLVGFVRMVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI

Query:  RKNYPLYAESFILRHFRRRRRNLRR
        RKNYPLYAESFILRHFRRRRRNLRR
Subjt:  RKNYPLYAESFILRHFRRRRRNLRR

XP_022133006.1 protein DCL homolog, chloroplastic [Momordica charantia]4.14e-13885.71Show/hide
Query:  MAMASILTLLPFPPFHSLNPNFFNSSPLILCFPTHPINSFHPSTRALKTGPEGSRIRSHQEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDEEEEVD
        MAMAS+    PFPPFHSLNP+F NSSP+ILCFP HP+ S HPS RALKTGPEGSRIRSH+EYSSDLLRKPVVPPAKD A  SEDD+ SEESG D EEE D
Subjt:  MAMASILTLLPFPPFHSLNPNFFNSSPLILCFPTHPINSFHPSTRALKTGPEGSRIRSHQEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDEEEEVD

Query:  WVDWEDKILEDTVPLVGFVRMVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
        WVDWEDKILEDTVPLVGFVRMVLH+GKY SGDRL  EHEKTIL+RLLPYHPE EKKIGCG+DYIT+GYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
Subjt:  WVDWEDKILEDTVPLVGFVRMVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI

Query:  RKNYPLYAESFILRHFRRRRRNLR
        RKNYPL+AESFILRHFRRRRRN R
Subjt:  RKNYPLYAESFILRHFRRRRRNLR

XP_038897137.1 protein DCL homolog, chloroplastic [Benincasa hispida]2.93e-14388.89Show/hide
Query:  MAMASILTLLPFPPFHSLNPNFFNSSPLILCFPTHPINSFHPSTRALKTGPEGSRIRSHQEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDEEEEVD
        MAMASIL   PF P HSLNPNFFNSSP+ILCFPT P+ SFH STRALKTGPEGSRIRSH+EYSSDLLRKPVVPPA+DLA  SEDDDSSEESGND+EEE D
Subjt:  MAMASILTLLPFPPFHSLNPNFFNSSPLILCFPTHPINSFHPSTRALKTGPEGSRIRSHQEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDEEEEVD

Query:  WVDWEDKILEDTVPLVGFVRMVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
        WVDWEDKILEDTVPLVGFVRMVLH+GKY SGDRL PEHEKTIL+RLLPYHPESEKKIGCG+DYIT+GYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
Subjt:  WVDWEDKILEDTVPLVGFVRMVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI

Query:  RKNYPLYAESFILRHFRRRRRNLRR
        RK YPL+AESFILRHFRRRRRN RR
Subjt:  RKNYPLYAESFILRHFRRRRRNLRR

TrEMBL top hitse value%identityAlignment
A0A0A0L2D0 Uncharacterized protein3.2e-11994.22Show/hide
Query:  MAMASILTLLPFPPFHSLNPNFFNSSPLILCFPTHPINSFHPSTRALKTGPEGSRIRSHQEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDEEEEVD
        MAMASIL   PFPPFHSLNPNFFNSSPLILCFPTHPINSFHPSTRALKTGPEG R+RSHQEYSSDLLRKPV P AKDLAGPSEDDDSSEESGN++EEEV+
Subjt:  MAMASILTLLPFPPFHSLNPNFFNSSPLILCFPTHPINSFHPSTRALKTGPEGSRIRSHQEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDEEEEVD

Query:  WVDWEDKILEDTVPLVGFVRMVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
        WVDWEDKILEDTVPLVGFVRMVLHTGKYE+GDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFIVRKDGE+VDFSYWKCIKGLI
Subjt:  WVDWEDKILEDTVPLVGFVRMVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI

Query:  RKNYPLYAESFILRHFRRRRRNLRR
        RKNYPLYAESFILRHFRRRRRN RR
Subjt:  RKNYPLYAESFILRHFRRRRRNLRR

A0A1S3BVA4 protein DCL, chloroplastic9.3e-127100Show/hide
Query:  MAMASILTLLPFPPFHSLNPNFFNSSPLILCFPTHPINSFHPSTRALKTGPEGSRIRSHQEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDEEEEVD
        MAMASILTLLPFPPFHSLNPNFFNSSPLILCFPTHPINSFHPSTRALKTGPEGSRIRSHQEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDEEEEVD
Subjt:  MAMASILTLLPFPPFHSLNPNFFNSSPLILCFPTHPINSFHPSTRALKTGPEGSRIRSHQEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDEEEEVD

Query:  WVDWEDKILEDTVPLVGFVRMVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
        WVDWEDKILEDTVPLVGFVRMVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
Subjt:  WVDWEDKILEDTVPLVGFVRMVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI

Query:  RKNYPLYAESFILRHFRRRRRNLRR
        RKNYPLYAESFILRHFRRRRRNLRR
Subjt:  RKNYPLYAESFILRHFRRRRRNLRR

A0A5A7VDC9 Protein DCL9.3e-127100Show/hide
Query:  MAMASILTLLPFPPFHSLNPNFFNSSPLILCFPTHPINSFHPSTRALKTGPEGSRIRSHQEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDEEEEVD
        MAMASILTLLPFPPFHSLNPNFFNSSPLILCFPTHPINSFHPSTRALKTGPEGSRIRSHQEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDEEEEVD
Subjt:  MAMASILTLLPFPPFHSLNPNFFNSSPLILCFPTHPINSFHPSTRALKTGPEGSRIRSHQEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDEEEEVD

Query:  WVDWEDKILEDTVPLVGFVRMVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
        WVDWEDKILEDTVPLVGFVRMVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
Subjt:  WVDWEDKILEDTVPLVGFVRMVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI

Query:  RKNYPLYAESFILRHFRRRRRNLRR
        RKNYPLYAESFILRHFRRRRRNLRR
Subjt:  RKNYPLYAESFILRHFRRRRRNLRR

A0A6J1BTU2 protein DCL homolog, chloroplastic6.3e-10785.71Show/hide
Query:  MAMASILTLLPFPPFHSLNPNFFNSSPLILCFPTHPINSFHPSTRALKTGPEGSRIRSHQEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDEEEEVD
        MAMAS+    PFPPFHSLNP+F NSSP+ILCFP HP+ S HPS RALKTGPEGSRIRSH+EYSSDLLRKPVVPPAKD A  SEDD+ SEESG D EEE D
Subjt:  MAMASILTLLPFPPFHSLNPNFFNSSPLILCFPTHPINSFHPSTRALKTGPEGSRIRSHQEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDEEEEVD

Query:  WVDWEDKILEDTVPLVGFVRMVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
        WVDWEDKILEDTVPLVGFVRMVLH+GKY SGDRL  EHEKTIL+RLLPYHPE EKKIGCG+DYIT+GYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
Subjt:  WVDWEDKILEDTVPLVGFVRMVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI

Query:  RKNYPLYAESFILRHFRRRRRNLR
        RKNYPL+AESFILRHFRRRRRN R
Subjt:  RKNYPLYAESFILRHFRRRRRNLR

A0A6J1FFU9 protein DCL homolog, chloroplastic-like2.3e-10180.89Show/hide
Query:  MAMASILTLLPFPPFHSLNPNFFNSSPLILCFPTHPINSFHPSTRALKTGPEGSRIRSHQEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDEEEEVD
        +AMASIL   P  P HSLNPN  N+SP+I+CF THP+ SFHPS RALKTGPEGSRIRSH+EYSSDLLRKPVVPPA DLA PSED  SSEESGN +EEE +
Subjt:  MAMASILTLLPFPPFHSLNPNFFNSSPLILCFPTHPINSFHPSTRALKTGPEGSRIRSHQEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDEEEEVD

Query:  WVDWEDKILEDTVPLVGFVRMVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
        WVDWED+ILE+TVPLVGFVRMVLH+GKYESGDRL PEHEKTIL+RLL YHPE EKKIGCG+DYIT+GYHP+FE SRCLFIVRKDGELVDFSYWKC++GLI
Subjt:  WVDWEDKILEDTVPLVGFVRMVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI

Query:  RKNYPLYAESFILRHFRRRRRNLRR
        RKNYPL+AESFILRHF+RRRR+  R
Subjt:  RKNYPLYAESFILRHFRRRRRNLRR

SwissProt top hitse value%identityAlignment
P85936 Protein DCL, chloroplastic (Fragment)7.4e-0481.82Show/hide
Query:  WVDWEDKILEDTVPLVGFVRMV
        WVDWED+IL+DTVPLV FVRM+
Subjt:  WVDWEDKILEDTVPLVGFVRMV

Q42463 Protein DCL, chloroplastic8.0e-6769.44Show/hide
Query:  ALKTGPEGSRIRSHQEYSSDLLRKPVVPPAKDLAGPSED---DDSSEESGNDEEEEVDWVDWEDKILEDTVPLVGFVRMVLHTGKYESGDRLRPEHEKTI
        A+KTG EG  IRS    +++LLRKPV+    +    SE+   ++S +E G    +   WVDWED+ILEDTVPLVGFVRM+LH+GKY  GDRL P+H++TI
Subjt:  ALKTGPEGSRIRSHQEYSSDLLRKPVVPPAKDLAGPSED---DDSSEESGNDEEEEVDWVDWEDKILEDTVPLVGFVRMVLHTGKYESGDRLRPEHEKTI

Query:  LERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLYAESFILRHFRRRRRN
        L+RLLPYHPE +KKIG GVDYITVGYHPDFE+SRCLFIVRKDGE VDFSYWKCIKGLIRKNYPLYA+SFILRHFR+RRRN
Subjt:  LERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLYAESFILRHFRRRRRN

Q5D869 DNA-directed RNA polymerase V subunit 18.7e-2139.66Show/hide
Query:  EDKILEDTVPLVGFVRMVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNY
        E ++L D  P++  +R ++H   Y  GD +  + +  +LE++L +HP+ E K+G GVD+ITV  H  F  SRC F+V  DG   DFSY K +   + K Y
Subjt:  EDKILEDTVPLVGFVRMVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNY

Query:  PLYAESFILRHFRRRR
        P  AE FI ++F + R
Subjt:  PLYAESFILRHFRRRR

Q8L557 Protein EMBRYO DEFECTIVE 5144.3e-0431.36Show/hide
Query:  EDDDSSEESGNDEEEEVDWVDWEDKILEDTVPLVGFVRMVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFIVR
        E+   S++    EEE+   V    K    +V +  +    LH    +  D  + EH   +L+ +   H E EKKIG G+    V  HP ++ SRC F+VR
Subjt:  EDDDSSEESGNDEEEEVDWVDWEDKILEDTVPLVGFVRMVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFIVR

Query:  KDGELVDFSYWKCIKGLI
        +D    DFS+ KC+  ++
Subjt:  KDGELVDFSYWKCIKGLI

Q9C642 Protein DCL homolog, chloroplastic1.1e-6860.44Show/hide
Query:  MAMASILTLLPF--PPFHSLNPNF-FNSSPLILCFPTHPINSFHPSTRALKTGPEGSRIRSHQEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDEEE
        M++ASI +  P   P F      F F+SSPL L FP     S  P  RAL+T  +G++I + + Y S+LLR+P +   +     S +++  EE  N E +
Subjt:  MAMASILTLLPF--PPFHSLNPNF-FNSSPLILCFPTHPINSFHPSTRALKTGPEGSRIRSHQEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDEEE

Query:  EVDWVDWEDKILEDTVPLVGFVRMVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIK
        E  +VDWEDKILE TVPLVGFVRM+LH+GKY + DRL PEHE+TI+E LLPYHPE EKKIGCG+DYI VG+HPDFESSRC+FIVRKDGE+VDFSYWKCIK
Subjt:  EVDWVDWEDKILEDTVPLVGFVRMVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIK

Query:  GLIRKNYPLYAESFILRHFRRRRRN
        GLI+K YPLYA+SFILRHFR+RR+N
Subjt:  GLIRKNYPLYAESFILRHFRRRRRN

Arabidopsis top hitse value%identityAlignment
AT1G45230.1 Protein of unknown function (DUF3223)7.9e-7060.44Show/hide
Query:  MAMASILTLLPF--PPFHSLNPNF-FNSSPLILCFPTHPINSFHPSTRALKTGPEGSRIRSHQEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDEEE
        M++ASI +  P   P F      F F+SSPL L FP     S  P  RAL+T  +G++I + + Y S+LLR+P +   +     S +++  EE  N E +
Subjt:  MAMASILTLLPF--PPFHSLNPNF-FNSSPLILCFPTHPINSFHPSTRALKTGPEGSRIRSHQEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDEEE

Query:  EVDWVDWEDKILEDTVPLVGFVRMVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIK
        E  +VDWEDKILE TVPLVGFVRM+LH+GKY + DRL PEHE+TI+E LLPYHPE EKKIGCG+DYI VG+HPDFESSRC+FIVRKDGE+VDFSYWKCIK
Subjt:  EVDWVDWEDKILEDTVPLVGFVRMVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIK

Query:  GLIRKNYPLYAESFILRHFRRRRRN
        GLI+K YPLYA+SFILRHFR+RR+N
Subjt:  GLIRKNYPLYAESFILRHFRRRRRN

AT1G45230.2 Protein of unknown function (DUF3223)6.7e-6960Show/hide
Query:  MAMASILTLLPF--PPFHSLNPNF-FNSSPLILCFPTHPINSFHPSTRALKTGPEGSRIRSHQEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDEEE
        M++ASI +  P   P F      F F+SSPL L FP     S  P  RAL+T  +G++I + + Y S+LLR+P +   +     S +++  EE  N E +
Subjt:  MAMASILTLLPF--PPFHSLNPNF-FNSSPLILCFPTHPINSFHPSTRALKTGPEGSRIRSHQEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDEEE

Query:  EVDWVDWEDKILEDTVPLVGFVRMVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIK
        E  +VDWEDKILE TVPLVGFVRM+LH+GKY + DRL PEHE+TI+E LLPYHPE EKKIGCG+DYI V +HPDFESSRC+FIVRKDGE+VDFSYWKCIK
Subjt:  EVDWVDWEDKILEDTVPLVGFVRMVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIK

Query:  GLIRKNYPLYAESFILRHFRRRRRN
        GLI+K YPLYA+SFILRHFR+RR+N
Subjt:  GLIRKNYPLYAESFILRHFRRRRRN

AT2G40030.1 nuclear RNA polymerase D1B6.1e-2239.66Show/hide
Query:  EDKILEDTVPLVGFVRMVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNY
        E ++L D  P++  +R ++H   Y  GD +  + +  +LE++L +HP+ E K+G GVD+ITV  H  F  SRC F+V  DG   DFSY K +   + K Y
Subjt:  EDKILEDTVPLVGFVRMVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNY

Query:  PLYAESFILRHFRRRR
        P  AE FI ++F + R
Subjt:  PLYAESFILRHFRRRR

AT3G46630.1 Protein of unknown function (DUF3223)8.6e-3250Show/hide
Query:  WVDWEDKILEDTVPLVGFVRMVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
        W + E +IL D  P+    + +LH+ +Y  G+RL  E EK ++E+LLPYHP S+ KIGCG+D+I V  HP F  SRCLF+VR DG  +DFSY KC++  +
Subjt:  WVDWEDKILEDTVPLVGFVRMVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI

Query:  RKNYPLYAESFILRHFRR
        R  YP +AE FI  HF+R
Subjt:  RKNYPLYAESFILRHFRR

AT5G62440.1 Protein of unknown function (DUF3223)3.1e-0531.36Show/hide
Query:  EDDDSSEESGNDEEEEVDWVDWEDKILEDTVPLVGFVRMVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFIVR
        E+   S++    EEE+   V    K    +V +  +    LH    +  D  + EH   +L+ +   H E EKKIG G+    V  HP ++ SRC F+VR
Subjt:  EDDDSSEESGNDEEEEVDWVDWEDKILEDTVPLVGFVRMVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFIVR

Query:  KDGELVDFSYWKCIKGLI
        +D    DFS+ KC+  ++
Subjt:  KDGELVDFSYWKCIKGLI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATGGCGTCCATTTTGACACTACTGCCATTTCCGCCCTTTCACTCTCTAAATCCAAACTTCTTCAACTCTTCACCACTGATCTTATGTTTTCCTACACACCCAAT
CAATTCGTTTCACCCATCTACTCGTGCCCTCAAAACTGGCCCTGAAGGCAGTAGAATTCGAAGCCATCAAGAATATAGTTCCGATTTGCTGCGGAAACCGGTTGTTCCAC
CGGCGAAGGATTTGGCTGGACCATCGGAGGATGACGACAGCAGTGAGGAGAGTGGAAATGACGAGGAGGAGGAAGTGGATTGGGTTGATTGGGAGGACAAGATTTTGGAG
GATACTGTTCCTCTGGTTGGCTTTGTTAGGATGGTTCTTCACACTGGAAAATATGAAAGTGGGGATAGGTTGAGACCAGAACACGAGAAAACAATTCTTGAGAGGTTGCT
TCCATATCATCCCGAGAGTGAGAAGAAGATTGGATGTGGGGTTGATTATATCACGGTTGGATATCATCCTGATTTTGAAAGCTCAAGATGTTTATTCATAGTCAGAAAAG
ATGGAGAGTTGGTTGACTTTTCATATTGGAAGTGCATCAAGGGTCTGATCAGAAAGAACTATCCTCTTTACGCAGAAAGCTTCATTCTTAGGCATTTCCGGCGACGTAGA
CGCAATTTGCGTCGGTAA
mRNA sequenceShow/hide mRNA sequence
GGAATGCGGATCGAAGAGAAATTCTATAGAATCTCCATTCCATGAGATTGATGATAATGTGAGCGACCGTTAACAGTTCTTCTTCCTCCGTTTTCTCAAAGAATTGGGAG
AAAAGCCATGCTCCGAAATCGCACACTACCATTTCATTCTCGATAGTTGCAATTTCAAGCTCCTTGTCTCAATTGATCAAGGGCATGGCCATGGCGTCCATTTTGACACT
ACTGCCATTTCCGCCCTTTCACTCTCTAAATCCAAACTTCTTCAACTCTTCACCACTGATCTTATGTTTTCCTACACACCCAATCAATTCGTTTCACCCATCTACTCGTG
CCCTCAAAACTGGCCCTGAAGGCAGTAGAATTCGAAGCCATCAAGAATATAGTTCCGATTTGCTGCGGAAACCGGTTGTTCCACCGGCGAAGGATTTGGCTGGACCATCG
GAGGATGACGACAGCAGTGAGGAGAGTGGAAATGACGAGGAGGAGGAAGTGGATTGGGTTGATTGGGAGGACAAGATTTTGGAGGATACTGTTCCTCTGGTTGGCTTTGT
TAGGATGGTTCTTCACACTGGAAAATATGAAAGTGGGGATAGGTTGAGACCAGAACACGAGAAAACAATTCTTGAGAGGTTGCTTCCATATCATCCCGAGAGTGAGAAGA
AGATTGGATGTGGGGTTGATTATATCACGGTTGGATATCATCCTGATTTTGAAAGCTCAAGATGTTTATTCATAGTCAGAAAAGATGGAGAGTTGGTTGACTTTTCATAT
TGGAAGTGCATCAAGGGTCTGATCAGAAAGAACTATCCTCTTTACGCAGAAAGCTTCATTCTTAGGCATTTCCGGCGACGTAGACGCAATTTGCGTCGGTAACACCTGTA
AGATCTGTTAATCATACTCTTGTATCATTCAATTTCAGGAATTCTTTGAATATCAAAGCTTGAGATTGACCAACCACGCTTGTGTGGTTCTCTTGTGTTTAATGACTTGA
AATTAGCAAATCAAGATGGATATGGGGTGAATGTAGACTCTTGCTTAGTAAAATTCAATTTTGTA
Protein sequenceShow/hide protein sequence
MAMASILTLLPFPPFHSLNPNFFNSSPLILCFPTHPINSFHPSTRALKTGPEGSRIRSHQEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDEEEEVDWVDWEDKILE
DTVPLVGFVRMVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLYAESFILRHFRRRR
RNLRR