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IVF0017379 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0017379
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr01:20054597..20055138
RNA-Seq ExpressionIVF0017379
SyntenyIVF0017379
Gene Ontology termsGO:0001510 - RNA methylation (biological process)
GO:0034470 - ncRNA processing (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067273.1 retrotransposon protein [Cucumis melo var. makuwa]5.58e-6085.71Show/hide
Query:  RDRATGGKCKTPVEMGVQTAKDTEEDDMDINLEDFEIPNPHGLEPPLGEDMPSTLTSMTHDAGSSRPSKKRRSYSGDLMDTFRASMQETSKEIGKVAAWQ
        RDRATGG+CKTP+EMG+Q A+DTEEDDMDINLEDF+IPNPHGLEPP GEDM ST TSM HD GSS+PSKKRRSYS DLMDTFRASM+ETSKEI K+AAWQ
Subjt:  RDRATGGKCKTPVEMGVQTAKDTEEDDMDINLEDFEIPNPHGLEPPLGEDMPSTLTSMTHDAGSSRPSKKRRSYSGDLMDTFRASMQETSKEIGKVAAWQ

Query:  REKMEIESSIHK
        REKMEIESSIHK
Subjt:  REKMEIESSIHK

TYK07921.1 hypothetical protein E5676_scaffold265G00330 [Cucumis melo var. makuwa]1.03e-6190.18Show/hide
Query:  RDRATGGKCKTPVEMGVQTAKDTEEDDMDINLEDFEIPNPHGLEPPLGEDMPSTLTSMTHDAGSSRPSKKRRSYSGDLMDTFRASMQETSKEIGKVAAWQ
        RDRATGG+CKTPVEM  QTA+DTEEDDMDINLEDF+IPNPHGLEPP GEDMPST TSMTHDAGSSRPSKKRRSYSGDLMDTFRASM+ETSKEIGK+A WQ
Subjt:  RDRATGGKCKTPVEMGVQTAKDTEEDDMDINLEDFEIPNPHGLEPPLGEDMPSTLTSMTHDAGSSRPSKKRRSYSGDLMDTFRASMQETSKEIGKVAAWQ

Query:  REKMEIESSIHK
        REKMEIESS+HK
Subjt:  REKMEIESSIHK

TYK10886.1 retrotransposon protein [Cucumis melo var. makuwa]7.47e-5884.82Show/hide
Query:  RDRATGGKCKTPVEMGVQTAKDTEEDDMDINLEDFEIPNPHGLEPPLGEDMPSTLTSMTHDAGSSRPSKKRRSYSGDLMDTFRASMQETSKEIGKVAAWQ
        RDRATGG+CKTPVEMG+Q A+DTEEDDMDINLEDF+IPNPHGLEPP GEDM ST TSM +D GSSRPSKKRRSYS DLMDTF ASM+ETSKEI K+ AWQ
Subjt:  RDRATGGKCKTPVEMGVQTAKDTEEDDMDINLEDFEIPNPHGLEPPLGEDMPSTLTSMTHDAGSSRPSKKRRSYSGDLMDTFRASMQETSKEIGKVAAWQ

Query:  REKMEIESSIHK
        REKMEIESSIHK
Subjt:  REKMEIESSIHK

TYK17861.1 tRNA (guanine(10)-N2)-methyltransferase-like protein [Cucumis melo var. makuwa]3.88e-58100Show/hide
Query:  RDRATGGKCKTPVEMGVQTAKDTEEDDMDINLEDFEIPNPHGLEPPLGEDMPSTLTSMTHDAGSSRPSKKRRSYSGDLMDTFRASMQETSKEIGK
        RDRATGGKCKTPVEMGVQTAKDTEEDDMDINLEDFEIPNPHGLEPPLGEDMPSTLTSMTHDAGSSRPSKKRRSYSGDLMDTFRASMQETSKEIGK
Subjt:  RDRATGGKCKTPVEMGVQTAKDTEEDDMDINLEDFEIPNPHGLEPPLGEDMPSTLTSMTHDAGSSRPSKKRRSYSGDLMDTFRASMQETSKEIGK

XP_008460440.1 PREDICTED: uncharacterized protein LOC103499248 [Cucumis melo]5.41e-6085.71Show/hide
Query:  RDRATGGKCKTPVEMGVQTAKDTEEDDMDINLEDFEIPNPHGLEPPLGEDMPSTLTSMTHDAGSSRPSKKRRSYSGDLMDTFRASMQETSKEIGKVAAWQ
        RDRATGG+CKTP+EMG+Q A+DTEEDDMDINLEDF+IPNPHGLEPP GEDM ST TSM HD GSS+PSKKRRSYS DLMDTFRASM+ETSKEI K+AAWQ
Subjt:  RDRATGGKCKTPVEMGVQTAKDTEEDDMDINLEDFEIPNPHGLEPPLGEDMPSTLTSMTHDAGSSRPSKKRRSYSGDLMDTFRASMQETSKEIGKVAAWQ

Query:  REKMEIESSIHK
        REKMEIESSIHK
Subjt:  REKMEIESSIHK

TrEMBL top hitse value%identityAlignment
A0A1S3CC17 uncharacterized protein LOC1034992481.2e-4685.71Show/hide
Query:  RDRATGGKCKTPVEMGVQTAKDTEEDDMDINLEDFEIPNPHGLEPPLGEDMPSTLTSMTHDAGSSRPSKKRRSYSGDLMDTFRASMQETSKEIGKVAAWQ
        RDRATGG+CKTP+EMG+Q A+DTEEDDMDINLEDF+IPNPHGLEPP GEDM ST TSM HD GSS+PSKKRRSYS DLMDTFRASM+ETSKEI K+AAWQ
Subjt:  RDRATGGKCKTPVEMGVQTAKDTEEDDMDINLEDFEIPNPHGLEPPLGEDMPSTLTSMTHDAGSSRPSKKRRSYSGDLMDTFRASMQETSKEIGKVAAWQ

Query:  REKMEIESSIHK
        REKMEIESSIHK
Subjt:  REKMEIESSIHK

A0A5A7TF32 tRNA (Guanine(10)-N2)-methyltransferase-like protein1.4e-4587.5Show/hide
Query:  RDRATGGKCKTPVEMGVQTAKDTEEDDMDINLEDFEIPNPHGLEPPLGEDMPSTLTSMTHDAGSSRPSKKRRSYSGDLMDTFRASMQETSKEIGKVAAWQ
        RDRATGGKCKTPVEMGVQTAKDTEEDDMDINLEDFEIPNPHGLEPPLGEDMPSTLTSMTHDAGSSRPSKKRRSYSGDLMDTFRASMQETSKEIGK     
Subjt:  RDRATGGKCKTPVEMGVQTAKDTEEDDMDINLEDFEIPNPHGLEPPLGEDMPSTLTSMTHDAGSSRPSKKRRSYSGDLMDTFRASMQETSKEIGKVAAWQ

Query:  REKMEIESSIHK
          ++  E+  HK
Subjt:  REKMEIESSIHK

A0A5A7VG45 Retrotransposon protein9.4e-4781.67Show/hide
Query:  CSLTGLRD--RATGGKCKTPVEMGVQTAKDTEEDDMDINLEDFEIPNPHGLEPPLGEDMPSTLTSMTHDAGSSRPSKKRRSYSGDLMDTFRASMQETSKE
        CS  G  +  +ATGG+CKTPVE+G QTA+DTEEDDMDINLEDF+IPNPHGLEPP GEDMPST TSM HDAG  RPSKKRR YSGDLMDTFRASM+ETSKE
Subjt:  CSLTGLRD--RATGGKCKTPVEMGVQTAKDTEEDDMDINLEDFEIPNPHGLEPPLGEDMPSTLTSMTHDAGSSRPSKKRRSYSGDLMDTFRASMQETSKE

Query:  IGKVAAWQREKMEIESSIHK
        IGK+AAWQREKMEIESS+HK
Subjt:  IGKVAAWQREKMEIESSIHK

A0A5A7VGQ0 Retrotransposon protein1.2e-4685.71Show/hide
Query:  RDRATGGKCKTPVEMGVQTAKDTEEDDMDINLEDFEIPNPHGLEPPLGEDMPSTLTSMTHDAGSSRPSKKRRSYSGDLMDTFRASMQETSKEIGKVAAWQ
        RDRATGG+CKTP+EMG+Q A+DTEEDDMDINLEDF+IPNPHGLEPP GEDM ST TSM HD GSS+PSKKRRSYS DLMDTFRASM+ETSKEI K+AAWQ
Subjt:  RDRATGGKCKTPVEMGVQTAKDTEEDDMDINLEDFEIPNPHGLEPPLGEDMPSTLTSMTHDAGSSRPSKKRRSYSGDLMDTFRASMQETSKEIGKVAAWQ

Query:  REKMEIESSIHK
        REKMEIESSIHK
Subjt:  REKMEIESSIHK

A0A5D3C7T4 Uncharacterized protein7.0e-5090.18Show/hide
Query:  RDRATGGKCKTPVEMGVQTAKDTEEDDMDINLEDFEIPNPHGLEPPLGEDMPSTLTSMTHDAGSSRPSKKRRSYSGDLMDTFRASMQETSKEIGKVAAWQ
        RDRATGG+CKTPVEM  QTA+DTEEDDMDINLEDF+IPNPHGLEPP GEDMPST TSMTHDAGSSRPSKKRRSYSGDLMDTFRASM+ETSKEIGK+A WQ
Subjt:  RDRATGGKCKTPVEMGVQTAKDTEEDDMDINLEDFEIPNPHGLEPPLGEDMPSTLTSMTHDAGSSRPSKKRRSYSGDLMDTFRASMQETSKEIGKVAAWQ

Query:  REKMEIESSIHK
        REKMEIESS+HK
Subjt:  REKMEIESSIHK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGAACAAAAGTGCATTGAGGCAGAGAAATCCGTGTTCGCTGACTGGGTTAAGAGATAGGGCTACTGGTGGTAAATGTAAGACACCCGTTGAAATGGGCGTACAGAC
TGCAAAAGATACTGAGGAAGATGACATGGACATTAATCTTGAAGACTTTGAAATTCCAAATCCACATGGACTCGAGCCACCTTTAGGAGAGGACATGCCATCTACTCTAA
CAAGTATGACACATGATGCGGGATCATCCAGGCCAAGTAAGAAAAGACGGTCATATTCAGGGGACCTCATGGACACATTTCGCGCAAGTATGCAAGAAACTTCCAAGGAA
ATTGGAAAGGTTGCTGCATGGCAGAGAGAAAAAATGGAAATAGAATCATCCATACACAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGAACAAAAGTGCATTGAGGCAGAGAAATCCGTGTTCGCTGACTGGGTTAAGAGATAGGGCTACTGGTGGTAAATGTAAGACACCCGTTGAAATGGGCGTACAGAC
TGCAAAAGATACTGAGGAAGATGACATGGACATTAATCTTGAAGACTTTGAAATTCCAAATCCACATGGACTCGAGCCACCTTTAGGAGAGGACATGCCATCTACTCTAA
CAAGTATGACACATGATGCGGGATCATCCAGGCCAAGTAAGAAAAGACGGTCATATTCAGGGGACCTCATGGACACATTTCGCGCAAGTATGCAAGAAACTTCCAAGGAA
ATTGGAAAGGTTGCTGCATGGCAGAGAGAAAAAATGGAAATAGAATCATCCATACACAAATGA
Protein sequenceShow/hide protein sequence
MRNKSALRQRNPCSLTGLRDRATGGKCKTPVEMGVQTAKDTEEDDMDINLEDFEIPNPHGLEPPLGEDMPSTLTSMTHDAGSSRPSKKRRSYSGDLMDTFRASMQETSKE
IGKVAAWQREKMEIESSIHK