; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0017382 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0017382
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionnuclear transport factor 2-like
Genome locationchr10:10351717..10351947
RNA-Seq ExpressionIVF0017382
SyntenyIVF0017382
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0005829 - cytosol (cellular component)
GO:0043229 - intracellular organelle (cellular component)
GO:1990904 - ribonucleoprotein complex (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR032710 - NTF2-like domain superfamily
IPR039539 - Ras GTPase-activating protein-binding protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ACA35266.1 nuclear transport family protein [Cucumis sativus]4.52e-1588.1Show/hide
Query:  FFVGQYYQVLQQQPDYVYQFHSHACTMIRIDGNFRESTTAML
        +FVGQYYQVLQQQPDYVYQF+S A TMIRIDGNFRES TAML
Subjt:  FFVGQYYQVLQQQPDYVYQFHSHACTMIRIDGNFRESTTAML
KAA0049207.1 putative G3BP-like protein [Cucumis melo var. makuwa]4.54e-1588.1Show/hide
Query:  FFVGQYYQVLQQQPDYVYQFHSHACTMIRIDGNFRESTTAML
        +FVGQYYQVLQQQPDYVYQF+S A TMIRIDGNFRES TAML
Subjt:  FFVGQYYQVLQQQPDYVYQFHSHACTMIRIDGNFRESTTAML
XP_004134037.1 nuclear transport factor 2 [Cucumis sativus]4.37e-1588.1Show/hide
Query:  FFVGQYYQVLQQQPDYVYQFHSHACTMIRIDGNFRESTTAML
        +FVGQYYQVLQQQPDYVYQF+S A TMIRIDGNFRES TAML
Subjt:  FFVGQYYQVLQQQPDYVYQFHSHACTMIRIDGNFRESTTAML
XP_016898952.1 PREDICTED: LOW QUALITY PROTEIN: putative G3BP-like protein [Cucumis melo]4.54e-1588.1Show/hide
Query:  FFVGQYYQVLQQQPDYVYQFHSHACTMIRIDGNFRESTTAML
        +FVGQYYQVLQQQPDYVYQF+S A TMIRIDGNFRES TAML
Subjt:  FFVGQYYQVLQQQPDYVYQFHSHACTMIRIDGNFRESTTAML
XP_038907140.1 nuclear transport factor 2-like isoform X2 [Benincasa hispida]1.12e-1485.71Show/hide
Query:  FFVGQYYQVLQQQPDYVYQFHSHACTMIRIDGNFRESTTAML
        +FVGQYYQVLQQQPDYVYQF+S A TMIRIDGNFRE+ TAML
Subjt:  FFVGQYYQVLQQQPDYVYQFHSHACTMIRIDGNFRESTTAML
TrEMBL top hitse value%identityAlignment
A0A0A0L6Y9 Uncharacterized protein1.5e-1188.1Show/hide
Query:  FFVGQYYQVLQQQPDYVYQFHSHACTMIRIDGNFRESTTAML
        +FVGQYYQVLQQQPDYVYQF+S A TMIRIDGNFRES TAML
Subjt:  FFVGQYYQVLQQQPDYVYQFHSHACTMIRIDGNFRESTTAML
A0A1S4DSH7 LOW QUALITY PROTEIN: putative G3BP-like protein1.5e-1188.1Show/hide
Query:  FFVGQYYQVLQQQPDYVYQFHSHACTMIRIDGNFRESTTAML
        +FVGQYYQVLQQQPDYVYQF+S A TMIRIDGNFRES TAML
Subjt:  FFVGQYYQVLQQQPDYVYQFHSHACTMIRIDGNFRESTTAML
A0A5D3CZH4 Putative G3BP-like protein1.5e-1188.1Show/hide
Query:  FFVGQYYQVLQQQPDYVYQFHSHACTMIRIDGNFRESTTAML
        +FVGQYYQVLQQQPDYVYQF+S A TMIRIDGNFRES TAML
Subjt:  FFVGQYYQVLQQQPDYVYQFHSHACTMIRIDGNFRESTTAML
A0A6J1DZN7 putative G3BP-like protein2.9e-1078.57Show/hide
Query:  FFVGQYYQVLQQQPDYVYQFHSHACTMIRIDGNFRESTTAML
        +FVGQYYQVLQQQPDYV+QF+S A TM+R+DGNFRE+ TAML
Subjt:  FFVGQYYQVLQQQPDYVYQFHSHACTMIRIDGNFRESTTAML
B3U2A1 Nuclear transport family protein1.5e-1188.1Show/hide
Query:  FFVGQYYQVLQQQPDYVYQFHSHACTMIRIDGNFRESTTAML
        +FVGQYYQVLQQQPDYVYQF+S A TMIRIDGNFRES TAML
Subjt:  FFVGQYYQVLQQQPDYVYQFHSHACTMIRIDGNFRESTTAML
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G43960.1 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain6.0e-0857.14Show/hide
Query:  FFVGQYYQVLQQQPDYVYQFHSHACTMIRIDGNFRESTTAML
        +FVGQYYQVLQQQPD ++QF+S     IRIDG+  E+  ++L
Subjt:  FFVGQYYQVLQQQPDYVYQFHSHACTMIRIDGNFRESTTAML

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCATCAGGTTCTTTGTTGGGCAGTACTATCAGGTTCTTCAGCAGCAACCTGACTATGTTTATCAGTTCCATTCTCATGCCTGTACTATGATCCGGATTGATGGCAA
TTTCAGAGAGTCCACCACTGCAATGCTGAGCACAATCCGAGGATTGTTTGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCATCAGGTTCTTTGTTGGGCAGTACTATCAGGTTCTTCAGCAGCAACCTGACTATGTTTATCAGTTCCATTCTCATGCCTGTACTATGATCCGGATTGATGGCAA
TTTCAGAGAGTCCACCACTGCAATGCTGAGCACAATCCGAGGATTGTTTGTTTGA
Protein sequenceShow/hide protein sequence
MFIRFFVGQYYQVLQQQPDYVYQFHSHACTMIRIDGNFRESTTAMLSTIRGLFV