; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0017385 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0017385
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionphotosystem II 22 kDa protein, chloroplastic
Genome locationchr03:8195481..8197695
RNA-Seq ExpressionIVF0017385
SyntenyIVF0017385
Gene Ontology termsGO:0010027 - thylakoid membrane organization (biological process)
GO:0010196 - nonphotochemical quenching (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0019904 - protein domain specific binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150442.1 photosystem II 22 kDa protein, chloroplastic [Cucumis sativus]7.63e-18797.79Show/hide
Query:  MAAQTMLLTSGVCVGHGVCLKRELSLRPNNNQFTRLFFNPLPNHSVSLPARGFTPLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGR
        MAAQTMLLTSGVCVGHGVCLKRELSLRPN  QFTRLFFNPLP+HSVSLP RGFT LAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGR
Subjt:  MAAQTMLLTSGVCVGHGVCLKRELSLRPNNNQFTRLFFNPLPNHSVSLPARGFTPLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGR

Query:  VAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN
        VAMIGFAAS+LGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN
Subjt:  VAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN

Query:  ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
        ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
Subjt:  ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE

XP_008466710.1 PREDICTED: photosystem II 22 kDa protein, chloroplastic [Cucumis melo]5.00e-192100Show/hide
Query:  MAAQTMLLTSGVCVGHGVCLKRELSLRPNNNQFTRLFFNPLPNHSVSLPARGFTPLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGR
        MAAQTMLLTSGVCVGHGVCLKRELSLRPNNNQFTRLFFNPLPNHSVSLPARGFTPLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGR
Subjt:  MAAQTMLLTSGVCVGHGVCLKRELSLRPNNNQFTRLFFNPLPNHSVSLPARGFTPLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGR

Query:  VAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN
        VAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN
Subjt:  VAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN

Query:  ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
        ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
Subjt:  ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE

XP_022952982.1 photosystem II 22 kDa protein, chloroplastic-like [Cucurbita moschata]3.89e-16788.41Show/hide
Query:  MAAQTMLLTSGVCVGHGVCLKRELS-----LRPNNNQFTRLFFNPLPNHSVSLPARGFTPLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNE
        MAAQTM+L+SGVC  HGV LKRE++     LRPN  QF+RLFFNPLP+ SVSLPARGF  LA+FKS+ K P KKV KPK+KVEDGIFGTSGGIGFTKQNE
Subjt:  MAAQTMLLTSGVCVGHGVCLKRELS-----LRPNNNQFTRLFFNPLPNHSVSLPARGFTPLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNE

Query:  LFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFG
        LFVGRVAMIGFAASLLGE ITGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGK  RSALGLKEGGPLFG
Subjt:  LFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFG

Query:  FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD
        FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNV+FFFIAAVNPGTGKFVTDEE+D
Subjt:  FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD

XP_022991058.1 photosystem II 22 kDa protein, chloroplastic-like [Cucurbita maxima]6.44e-16688.04Show/hide
Query:  MAAQTMLLTSGVCVGHGVCLKRELS-----LRPNNNQFTRLFFNPLPNHSVSLPARGFTPLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNE
        MAAQTM+L+SGVC  HGV LKRE++     LRPN  Q +RLFFNPLP+ SVSLPARGF  LA+FKS+ K P KKV KPK+KVEDGIFGTSGGIGFTKQNE
Subjt:  MAAQTMLLTSGVCVGHGVCLKRELS-----LRPNNNQFTRLFFNPLPNHSVSLPARGFTPLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNE

Query:  LFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFG
        LFVGRVAMIGFAASLLGE ITGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGK  RSALGLKEGGPLFG
Subjt:  LFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFG

Query:  FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD
        FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNV+FFFIAAVNPGTGKFVTDEE+D
Subjt:  FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD

XP_038885143.1 photosystem II 22 kDa protein, chloroplastic [Benincasa hispida]4.56e-18195.96Show/hide
Query:  MAAQTMLLTSGVCVGHGVCLKRELSLRPNNNQFTRLFFNPLPNHSVSLPARGFTPLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGR
        MAAQTMLLTSGVCVGHGV +KREL LRPN  QF+RLFFNPLP+HSVSLPARGFT LAVFKSRTKAPPKKV KPKQKVEDGIFGTSGGIGFTKQNELFVGR
Subjt:  MAAQTMLLTSGVCVGHGVCLKRELSLRPNNNQFTRLFFNPLPNHSVSLPARGFTPLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGR

Query:  VAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN
        VAMIGFAASLLGEAITGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGK+FRSALGLKEGGPLFGFTKAN
Subjt:  VAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN

Query:  ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
        ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
Subjt:  ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE

TrEMBL top hitse value%identityAlignment
A0A0A0K7N4 Photosystem II protein1.2e-14497.79Show/hide
Query:  MAAQTMLLTSGVCVGHGVCLKRELSLRPNNNQFTRLFFNPLPNHSVSLPARGFTPLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGR
        MAAQTMLLTSGVCVGHGVCLKRELSLRPN  QFTRLFFNPLP+HSVSLP RGFT LAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGR
Subjt:  MAAQTMLLTSGVCVGHGVCLKRELSLRPNNNQFTRLFFNPLPNHSVSLPARGFTPLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGR

Query:  VAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN
        VAMIGFAAS+LGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN
Subjt:  VAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN

Query:  ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
        ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
Subjt:  ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE

A0A1S3CS23 photosystem II 22 kDa protein, chloroplastic1.4e-148100Show/hide
Query:  MAAQTMLLTSGVCVGHGVCLKRELSLRPNNNQFTRLFFNPLPNHSVSLPARGFTPLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGR
        MAAQTMLLTSGVCVGHGVCLKRELSLRPNNNQFTRLFFNPLPNHSVSLPARGFTPLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGR
Subjt:  MAAQTMLLTSGVCVGHGVCLKRELSLRPNNNQFTRLFFNPLPNHSVSLPARGFTPLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGR

Query:  VAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN
        VAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN
Subjt:  VAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN

Query:  ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
        ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
Subjt:  ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE

A0A5A7UZ08 Photosystem II 22 kDa protein1.4e-148100Show/hide
Query:  MAAQTMLLTSGVCVGHGVCLKRELSLRPNNNQFTRLFFNPLPNHSVSLPARGFTPLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGR
        MAAQTMLLTSGVCVGHGVCLKRELSLRPNNNQFTRLFFNPLPNHSVSLPARGFTPLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGR
Subjt:  MAAQTMLLTSGVCVGHGVCLKRELSLRPNNNQFTRLFFNPLPNHSVSLPARGFTPLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGR

Query:  VAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN
        VAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN
Subjt:  VAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN

Query:  ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
        ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
Subjt:  ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE

A0A6J1GLX6 photosystem II 22 kDa protein, chloroplastic-like1.1e-12988.41Show/hide
Query:  MAAQTMLLTSGVCVGHGVCLKRELS-----LRPNNNQFTRLFFNPLPNHSVSLPARGFTPLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNE
        MAAQTM+L+SGVC  HGV LKRE++     LRP N QF+RLFFNPLP+ SVSLPARGF  LA+FKS+ K P KKV KPK+KVEDGIFGTSGGIGFTKQNE
Subjt:  MAAQTMLLTSGVCVGHGVCLKRELS-----LRPNNNQFTRLFFNPLPNHSVSLPARGFTPLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNE

Query:  LFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFG
        LFVGRVAMIGFAASLLGE ITGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGK  RSALGLKEGGPLFG
Subjt:  LFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFG

Query:  FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD
        FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNV+FFFIAAVNPGTGKFVTDEE+D
Subjt:  FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD

A0A6J1JV31 photosystem II 22 kDa protein, chloroplastic-like9.2e-12988.04Show/hide
Query:  MAAQTMLLTSGVCVGHGVCLKRELS-----LRPNNNQFTRLFFNPLPNHSVSLPARGFTPLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNE
        MAAQTM+L+SGVC  HGV LKRE++     LRP N Q +RLFFNPLP+ SVSLPARGF  LA+FKS+ K P KKV KPK+KVEDGIFGTSGGIGFTKQNE
Subjt:  MAAQTMLLTSGVCVGHGVCLKRELS-----LRPNNNQFTRLFFNPLPNHSVSLPARGFTPLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNE

Query:  LFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFG
        LFVGRVAMIGFAASLLGE ITGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGK  RSALGLKEGGPLFG
Subjt:  LFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFG

Query:  FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD
        FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNV+FFFIAAVNPGTGKFVTDEE+D
Subjt:  FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD

SwissProt top hitse value%identityAlignment
P54773 Photosystem II 22 kDa protein, chloroplastic3.3e-10775.81Show/hide
Query:  AQTMLLTSGVCVGHGVCLKRELSLRPNNNQFTRLFFNPLP----NHSVSLPARGF--TPLAVFKSRTKAPPKKVEKP--KQKVEDGIFGTSGGIGFTKQN
        AQTMLLT+   V   +  K  L  R      + LF   LP    + S +  +  F  T +A+FKS+ KAPPKKV  P  KQKVEDGIFGTSGGIGFTKQN
Subjt:  AQTMLLTSGVCVGHGVCLKRELSLRPNNNQFTRLFFNPLP----NHSVSLPARGF--TPLAVFKSRTKAPPKKVEKP--KQKVEDGIFGTSGGIGFTKQN

Query:  ELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLF
        ELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILF LLGAIGALGDRGKF+DDP P TGLE+AVIPPGKSF+SALGL EGGPLF
Subjt:  ELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLF

Query:  GFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD
        GFTKANELFVGRLAQLG AFS+IGEIITGKGALAQLN ETGVPINEIEPL+L N+ FFF AA+NPGTGKF+TDEE+D
Subjt:  GFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD

Q02060 Photosystem II 22 kDa protein, chloroplastic3.3e-10775.18Show/hide
Query:  MAAQTMLLTSGVCVGHGVCLKRELSLR------PNNNQFTRLFFNPLPNHSVSLPARGFTPLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQN
        MA   +L+  GV   + + LKR   L+         +  + LFF+PLP+ S S  +  F  LA+FKS+ KA PKKVEKPK KVEDG+FGTSGGIGFTK+N
Subjt:  MAAQTMLLTSGVCVGHGVCLKRELSLR------PNNNQFTRLFFNPLPNHSVSLPARGFTPLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQN

Query:  ELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLF
        ELFVGRVAMIGFAASLLGE ITGKGIL+QLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRG+F+D  EP TGLE+AVIPPGK  RSALGLK  GPLF
Subjt:  ELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLF

Query:  GFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
        GFTK+NELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAA+NPGTGKF+TD+E+++
Subjt:  GFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE

Q9FPP4 Photosystem II 22 kDa protein, chloroplastic2.5e-10775.81Show/hide
Query:  AQTMLLTSGVCVGHGVCLKRELSLRPNNNQFTRLFFNPLP----NHSVSLPARGF--TPLAVFKSRTKAPPKKVEKP--KQKVEDGIFGTSGGIGFTKQN
        AQTMLLT+   V   +  K  L  R      + LF   LP    + + +  +  F  T +A+FKS+ KAPPKKV  P  KQKVEDGIFGTSGGIGFTKQN
Subjt:  AQTMLLTSGVCVGHGVCLKRELSLRPNNNQFTRLFFNPLP----NHSVSLPARGF--TPLAVFKSRTKAPPKKVEKP--KQKVEDGIFGTSGGIGFTKQN

Query:  ELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLF
        ELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILF LLGAIGALGDRG+FIDDP PATGLE+AVIPPGKSF+SALGL EGGPLF
Subjt:  ELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLF

Query:  GFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD
        GFTKANELFVGRLAQLG AFS+IGEIITGKGALAQLN ETGVPINEIEPL+L N+ FFF AA+NPGTGKF+TDEE+D
Subjt:  GFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD

Q9SMB4 Photosystem II 22 kDa protein, chloroplastic3.4e-10474.91Show/hide
Query:  AQTMLLTSGVCVGHGVCLKRELSLRPNNNQFTRLFFNPLPNHSVSLPARG-----FTPLAVFKSRTKAPPKK-VEKPKQKVEDGIFGTSGGIGFTKQNEL
        AQTMLLT+   V   +  K  L  R      +  F   LP    S  A        T +A+FKS+ KAP KK V KPK+KVEDGIFGTSGGIGFTKQNEL
Subjt:  AQTMLLTSGVCVGHGVCLKRELSLRPNNNQFTRLFFNPLPNHSVSLPARG-----FTPLAVFKSRTKAPPKK-VEKPKQKVEDGIFGTSGGIGFTKQNEL

Query:  FVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGF
        FVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILF LLGAIGAL DRGKFIDDP P TGL++AVIPPGK F+SALGL EGGPLF F
Subjt:  FVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGF

Query:  TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD
        TKANELFVGRLAQLG AFS+IGEIITGKGALAQLN ETGVPINEIEPL+L N+VFFF+AA+NPGTGKFVTDEE++
Subjt:  TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD

Q9XF91 Photosystem II 22 kDa protein, chloroplastic1.7e-10877.86Show/hide
Query:  AQTMLLTSGVCVGHGVCLKRELSLRPNNNQFTRLFFNPLPNHSVSLPAR--GFTPLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGR
        AQTMLLTSGV  GH +  K  L+      +   LF +   N  V+LP+R   F PLA+FK +TKA PKKVEKPK KVEDGIFGTSGGIGFTK NELFVGR
Subjt:  AQTMLLTSGVCVGHGVCLKRELSLRPNNNQFTRLFFNPLPNHSVSLPAR--GFTPLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGR

Query:  VAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN
        VAMIGFAASLLGEA+TGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKF+DD  P TGLE+AVIPPGK+ RSALGLKE GPLFGFTKAN
Subjt:  VAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN

Query:  ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD
        ELFVGRLAQLG AFSLIGEIITGKGALAQLNIETG+PI +IEPLVLLNV FFF AA+NPG GKF+TD+ ++
Subjt:  ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD

Arabidopsis top hitse value%identityAlignment
AT1G44575.1 Chlorophyll A-B binding family protein1.2e-10977.86Show/hide
Query:  AQTMLLTSGVCVGHGVCLKRELSLRPNNNQFTRLFFNPLPNHSVSLPAR--GFTPLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGR
        AQTMLLTSGV  GH +  K  L+      +   LF +   N  V+LP+R   F PLA+FK +TKA PKKVEKPK KVEDGIFGTSGGIGFTK NELFVGR
Subjt:  AQTMLLTSGVCVGHGVCLKRELSLRPNNNQFTRLFFNPLPNHSVSLPAR--GFTPLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGR

Query:  VAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN
        VAMIGFAASLLGEA+TGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKF+DD  P TGLE+AVIPPGK+ RSALGLKE GPLFGFTKAN
Subjt:  VAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN

Query:  ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD
        ELFVGRLAQLG AFSLIGEIITGKGALAQLNIETG+PI +IEPLVLLNV FFF AA+NPG GKF+TD+ ++
Subjt:  ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD

AT1G44575.2 Chlorophyll A-B binding family protein4.8e-6975.39Show/hide
Query:  AQTMLLTSGVCVGHGVCLKRELSLRPNNNQFTRLFFNPLPNHSVSLPAR--GFTPLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGR
        AQTMLLTSGV  GH +  K  L+      +   LF +   N  V+LP+R   F PLA+FK +TKA PKKVEKPK KVEDGIFGTSGGIGFTK NELFVGR
Subjt:  AQTMLLTSGVCVGHGVCLKRELSLRPNNNQFTRLFFNPLPNHSVSLPAR--GFTPLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGR

Query:  VAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGG
        VAMIGFAASLLGEA+TGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKF+DD  P TGLE+AVIPPGK+ RSALGLKE G
Subjt:  VAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCTCAAACCATGCTCCTCACTTCTGGTGTGTGCGTCGGCCATGGTGTGTGTCTCAAAAGAGAATTGAGCCTTAGACCTAACAACAACCAATTTACTCGTCTCTT
TTTCAATCCTCTGCCGAACCATTCTGTTTCTTTACCGGCGCGTGGTTTCACCCCTCTTGCTGTGTTCAAATCCAGAACTAAAGCCCCGCCCAAGAAGGTTGAGAAGCCGA
AGCAGAAGGTTGAAGATGGAATTTTTGGGACTTCTGGTGGCATTGGTTTTACCAAGCAGAATGAACTCTTCGTCGGCCGTGTTGCTATGATCGGCTTTGCTGCATCATTG
CTAGGAGAGGCGATCACCGGAAAGGGAATTCTAGCTCAACTCAACTTAGAAACTGGAATTCCCATTTACGAGGCCGAGCCTCTTCTTCTCTTCTTCATCTTATTCACTCT
TCTCGGAGCCATCGGAGCCCTAGGAGACCGTGGAAAATTCATCGACGATCCTGAACCCGCCACTGGATTGGAACGCGCCGTCATTCCTCCCGGAAAGAGCTTCAGATCGG
CCTTAGGTCTCAAAGAAGGAGGTCCGTTGTTCGGATTCACCAAGGCCAATGAGCTGTTCGTCGGAAGATTGGCGCAGCTAGGGTTTGCGTTCTCGTTGATCGGAGAAATT
ATTACAGGAAAGGGAGCTTTGGCGCAATTGAACATCGAGACGGGAGTGCCGATCAATGAGATTGAGCCTCTGGTTTTGTTGAATGTTGTGTTCTTCTTCATTGCGGCGGT
GAATCCTGGAACTGGTAAATTCGTGACGGATGAAGAAGATGATGAATGA
mRNA sequenceShow/hide mRNA sequence
CTCAAACTCTTCCACCAAATCCACATGCACAATCTCCTTCTCTTCCCTTCCACCATACACTCAAAATCCCACTGATCTTCTTCTTCATAAAAACCCATATAATCATAAAT
TAATTTCCTCAAGTTTTTCTTTTCCAATTAAACAAACAACTCTGCTAAAGAGGCCTTTCTTCCACCATTTCCATGGCGGCTCAAACCATGCTCCTCACTTCTGGTGTGTG
CGTCGGCCATGGTGTGTGTCTCAAAAGAGAATTGAGCCTTAGACCTAACAACAACCAATTTACTCGTCTCTTTTTCAATCCTCTGCCGAACCATTCTGTTTCTTTACCGG
CGCGTGGTTTCACCCCTCTTGCTGTGTTCAAATCCAGAACTAAAGCCCCGCCCAAGAAGGTTGAGAAGCCGAAGCAGAAGGTTGAAGATGGAATTTTTGGGACTTCTGGT
GGCATTGGTTTTACCAAGCAGAATGAACTCTTCGTCGGCCGTGTTGCTATGATCGGCTTTGCTGCATCATTGCTAGGAGAGGCGATCACCGGAAAGGGAATTCTAGCTCA
ACTCAACTTAGAAACTGGAATTCCCATTTACGAGGCCGAGCCTCTTCTTCTCTTCTTCATCTTATTCACTCTTCTCGGAGCCATCGGAGCCCTAGGAGACCGTGGAAAAT
TCATCGACGATCCTGAACCCGCCACTGGATTGGAACGCGCCGTCATTCCTCCCGGAAAGAGCTTCAGATCGGCCTTAGGTCTCAAAGAAGGAGGTCCGTTGTTCGGATTC
ACCAAGGCCAATGAGCTGTTCGTCGGAAGATTGGCGCAGCTAGGGTTTGCGTTCTCGTTGATCGGAGAAATTATTACAGGAAAGGGAGCTTTGGCGCAATTGAACATCGA
GACGGGAGTGCCGATCAATGAGATTGAGCCTCTGGTTTTGTTGAATGTTGTGTTCTTCTTCATTGCGGCGGTGAATCCTGGAACTGGTAAATTCGTGACGGATGAAGAAG
ATGATGAATGAAGAGATGGATTGTGCTTTAATTTTTCTCTGTACATGATGAACTTAGCAAGTCCGTATGTTCTTTCTCAGGGTTGTTGTGCTATTAGAACATTCTTATCC
TCTGCTTGAGCACTCGAATCAACGAAATCGAAGTAACAAACTTTGGGTAGTTAAAGTTTAGGCAAACATCAGTCTTTTTGCTTCTTTCATTTTACTTTTCTCATTTTTCC
CCCTTTGGATTGGGTGGAGAAAATTAATTAATAAATACATTAGCCAAG
Protein sequenceShow/hide protein sequence
MAAQTMLLTSGVCVGHGVCLKRELSLRPNNNQFTRLFFNPLPNHSVSLPARGFTPLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASL
LGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEI
ITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE