; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0017388 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0017388
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRNA exonuclease 4
Genome locationchr07:3638244..3641322
RNA-Seq ExpressionIVF0017388
SyntenyIVF0017388
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008408 - 3'-5' exonuclease activity (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR013520 - Exonuclease, RNase T/DNA polymerase III
IPR036397 - Ribonuclease H superfamily
IPR037431 - RNA exonuclease 4, DEDDh 3'-5' exonuclease domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146040.1 RNA exonuclease 4 [Cucumis sativus]3.93e-15287.17Show/hide
Query:  MTSQLKKNPKPKLLNPNWAILQQKLKPHGSNHSKASTVPKSE-----------ERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGR
        M SQLKKNPKPKLLNPNWA+LQQKL PHGSNHS  +TV KSE           ERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGR
Subjt:  MTSQLKKNPKPKLLNPNWAILQQKLKPHGSNHSKASTVPKSE-----------ERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGR

Query:  VTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKG--FSNCPEESGRVIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEGCKRALRH
        VTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKK   F    +    +IKGK+LVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEGCKRALRH
Subjt:  VTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKG--FSNCPEESGRVIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEGCKRALRH

Query:  LAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDGGGFE
        LAAEFL V+IQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDGGGFE
Subjt:  LAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDGGGFE

XP_008463709.1 PREDICTED: RNA exonuclease 4 [Cucumis melo]6.15e-16190.94Show/hide
Query:  MTSQLKKNPKPKLLNPNWAILQQKLKPHGSNHSKASTVPKSE-----------ERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGR
        MTSQLKKNPKPKLLNPNWAILQQKLKPHGSNHSKASTVPKSE           ERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGR
Subjt:  MTSQLKKNPKPKLLNPNWAILQQKLKPHGSNHSKASTVPKSE-----------ERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGR

Query:  VTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKG--FSNCPEESGRVIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEGCKRALRH
        VTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKK   F    +    +IKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEGCKRALRH
Subjt:  VTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKG--FSNCPEESGRVIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEGCKRALRH

Query:  LAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDGGGFE
        LAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDGGGFE
Subjt:  LAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDGGGFE

XP_038897120.1 RNA exonuclease 4 isoform X1 [Benincasa hispida]4.02e-14583.15Show/hide
Query:  MTSQLKKNPKPKLLNPNWAILQQ--------KLKPHGSNHSKASTVPKSE-----------ERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQ
        M SQLKK  KPKLLNPNWA+LQQ        KLKP GSNHS++STVPKSE           ERSDVESNHSQKNILIPVNDDFSLTD VAMDCEMVGVGQ
Subjt:  MTSQLKKNPKPKLLNPNWAILQQ--------KLKPHGSNHSKASTVPKSE-----------ERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQ

Query:  GNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKG--FSNCPEESGRVIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKE
        GNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRP DLKK   FS   +    +IKGKILVGHALRNDLKALLLSHPK DVRDTSEYQFFQKE
Subjt:  GNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKG--FSNCPEESGRVIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKE

Query:  GCKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDGGGFE
        GC+RALRHLAAEFLGV+IQNGEHCPVEDARSAMLLYQKKRKEWEKSVK E KLKLKQKKRK RKKSKDGGGFE
Subjt:  GCKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDGGGFE

XP_038897121.1 RNA exonuclease 4 isoform X2 [Benincasa hispida]2.73e-14583.46Show/hide
Query:  MTSQLKKNPKPKLLNPNWAILQQ-------KLKPHGSNHSKASTVPKSE-----------ERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQG
        M SQLKK  KPKLLNPNWA+LQQ       KLKP GSNHS++STVPKSE           ERSDVESNHSQKNILIPVNDDFSLTD VAMDCEMVGVGQG
Subjt:  MTSQLKKNPKPKLLNPNWAILQQ-------KLKPHGSNHSKASTVPKSE-----------ERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQG

Query:  NKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKG--FSNCPEESGRVIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEG
        NKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRP DLKK   FS   +    +IKGKILVGHALRNDLKALLLSHPK DVRDTSEYQFFQKEG
Subjt:  NKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKG--FSNCPEESGRVIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEG

Query:  CKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDGGGFE
        C+RALRHLAAEFLGV+IQNGEHCPVEDARSAMLLYQKKRKEWEKSVK E KLKLKQKKRK RKKSKDGGGFE
Subjt:  CKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDGGGFE

XP_038897122.1 RNA exonuclease 4 isoform X3 [Benincasa hispida]3.86e-14885.66Show/hide
Query:  MTSQLKKNPKPKLLNPNWAILQQKLKPHGSNHSKASTVPKSE-----------ERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGR
        M SQLKK  KPKLLNPNWA+LQQKLKP GSNHS++STVPKSE           ERSDVESNHSQKNILIPVNDDFSLTD VAMDCEMVGVGQGNKSALGR
Subjt:  MTSQLKKNPKPKLLNPNWAILQQKLKPHGSNHSKASTVPKSE-----------ERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGR

Query:  VTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKG--FSNCPEESGRVIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEGCKRALRH
        VTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRP DLKK   FS   +    +IKGKILVGHALRNDLKALLLSHPK DVRDTSEYQFFQKEGC+RALRH
Subjt:  VTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKG--FSNCPEESGRVIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEGCKRALRH

Query:  LAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDGGGFE
        LAAEFLGV+IQNGEHCPVEDARSAMLLYQKKRKEWEKSVK E KLKLKQKKRK RKKSKDGGGFE
Subjt:  LAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDGGGFE

TrEMBL top hitse value%identityAlignment
A0A0A0KZK3 RNA exonuclease 49.5e-12087.17Show/hide
Query:  MTSQLKKNPKPKLLNPNWAILQQKLKPHGSNHSKASTVPKSE-----------ERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGR
        M SQLKKNPKPKLLNPNWA+LQQKL PHGSNHS  +TV KSE           ERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGR
Subjt:  MTSQLKKNPKPKLLNPNWAILQQKLKPHGSNHSKASTVPKSE-----------ERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGR

Query:  VTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKG--FSNCPEESGRVIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEGCKRALRH
        VTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKK   F    +    +IKGK+LVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEGCKRALRH
Subjt:  VTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKG--FSNCPEESGRVIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEGCKRALRH

Query:  LAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDGGGFE
        LAAEFL V+IQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDGGGFE
Subjt:  LAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDGGGFE

A0A1S3CJW0 RNA exonuclease 41.8e-12690.94Show/hide
Query:  MTSQLKKNPKPKLLNPNWAILQQKLKPHGSNHSKASTVPKSE-----------ERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGR
        MTSQLKKNPKPKLLNPNWAILQQKLKPHGSNHSKASTVPKSE           ERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGR
Subjt:  MTSQLKKNPKPKLLNPNWAILQQKLKPHGSNHSKASTVPKSE-----------ERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGR

Query:  VTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKG--FSNCPEESGRVIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEGCKRALRH
        VTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKK   F    +    +IKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEGCKRALRH
Subjt:  VTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKG--FSNCPEESGRVIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEGCKRALRH

Query:  LAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDGGGFE
        LAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDGGGFE
Subjt:  LAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDGGGFE

A0A5A7VEJ2 RNA exonuclease 48.6e-11390.08Show/hide
Query:  KLKPHGSNHSKASTVPKSE-----------ERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGRVTLVNKWGNVIYDEFVRPIERVV
        KLKPHGSNHSKASTVPKSE           ERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGRVTLVNKWGNVIYDEFVRPIERVV
Subjt:  KLKPHGSNHSKASTVPKSE-----------ERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGRVTLVNKWGNVIYDEFVRPIERVV

Query:  DFRTQISGIRPCDLKKG--FSNCPEESGRVIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEGCKRALRHLAAEFLGVQIQNGEHCPVEDARS
        DFRTQISGIRPCDLKK   F    +    +IKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEGCKRALRHLAAEFLGVQIQNGEHCPVEDARS
Subjt:  DFRTQISGIRPCDLKKG--FSNCPEESGRVIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEGCKRALRHLAAEFLGVQIQNGEHCPVEDARS

Query:  AMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDGGGFE
        AMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDGGGFE
Subjt:  AMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDGGGFE

A0A6J1FBB2 RNA exonuclease 46.4e-10879.62Show/hide
Query:  MTSQLKKNPKPKLLNPNWAILQQKLKPHGSNHSKASTVPKSE-----------ERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGR
        M SQLKK+ KPKLLNPNWA+LQQKL PHGS  S  S+VPKSE           +RSD ES+HS K +LIPVNDDFSLTD VAMDCEMVGVGQGNKSALGR
Subjt:  MTSQLKKNPKPKLLNPNWAILQQKLKPHGSNHSKASTVPKSE-----------ERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGR

Query:  VTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKG--FSNCPEESGRVIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEGCKRALRH
        VT+VNKWGNVIYDEFVRPIERVVDFRT+ISGIRPCDL+K   F    +    +IKG+ILVGHALRNDLKALLLSHPK DVRDTSEYQFFQ+ GC+RALRH
Subjt:  VTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKG--FSNCPEESGRVIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEGCKRALRH

Query:  LAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDGGGFE
        LAAE LGV+IQNGEHCPVEDARSAMLLYQKK KEWEKSVKAE KLKLKQKKRKPRKKSKDGGG E
Subjt:  LAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDGGGFE

E5GBF8 RNA exonuclease 41.8e-12690.94Show/hide
Query:  MTSQLKKNPKPKLLNPNWAILQQKLKPHGSNHSKASTVPKSE-----------ERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGR
        MTSQLKKNPKPKLLNPNWAILQQKLKPHGSNHSKASTVPKSE           ERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGR
Subjt:  MTSQLKKNPKPKLLNPNWAILQQKLKPHGSNHSKASTVPKSE-----------ERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGR

Query:  VTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKG--FSNCPEESGRVIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEGCKRALRH
        VTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKK   F    +    +IKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEGCKRALRH
Subjt:  VTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKG--FSNCPEESGRVIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEGCKRALRH

Query:  LAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDGGGFE
        LAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDGGGFE
Subjt:  LAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDGGGFE

SwissProt top hitse value%identityAlignment
Q08237 RNA exonuclease 47.4e-3740Show/hide
Query:  MTSQLKKNPKPKLLNPNWAILQQKLKPHGSNHSKASTVPKSEERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVG-QGNKSALGRVTLVNKWGNV
        M  ++ K+ K K        L+ K+     N +  ST  K   +  +      ++  I  N    +   +AMDCE VGVG +G +SAL R+++VN +G+V
Subjt:  MTSQLKKNPKPKLLNPNWAILQQKLKPHGSNHSKASTVPKSEERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVG-QGNKSALGRVTLVNKWGNV

Query:  IYDEFVRPIERVVDFRTQISGIRPCDLKKG--FSNCPEESGRVIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQK---EGCKRALRHLAAEFLG
        + DEFV+P E+VV++RT +SGI+P  +K    F    +++  +++G+ILVGHAL++DL+AL+LSHPK+ +RDTS +  F+K   +G   +L+ L  E L 
Subjt:  IYDEFVRPIERVVDFRTQISGIRPCDLKKG--FSNCPEESGRVIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQK---EGCKRALRHLAAEFLG

Query:  VQIQNGEHCPVEDARSAMLLYQKKRKEWEK
        + IQ GEH  VEDAR+ MLLY+K++ E+EK
Subjt:  VQIQNGEHCPVEDARSAMLLYQKKRKEWEK

Q6DEW6 RNA exonuclease 42.1e-3946.99Show/hide
Query:  LTDEVAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKG--FSNCPEESGRVIKGKILVGHALRNDLKALLLSH
        LT  VAMDCEMVGVG  G +S L RV++VN +G  +YD++VRP ERV D+RT +SGIRP D+K G  F +   E   +++G+ LVGHA+ NDLK L L H
Subjt:  LTDEVAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKG--FSNCPEESGRVIKGKILVGHALRNDLKALLLSH

Query:  PKNDVRDTSEYQFFQK--EGCKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRK
        PK  +RDT +Y+ F++  +  + +L+ L  + L V++Q GEHC V+DA++AM LY  ++K WE ++KA+       K + P+K
Subjt:  PKNDVRDTSEYQFFQK--EGCKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRK

Q6PAQ4 RNA exonuclease 41.3e-3846.67Show/hide
Query:  LTDEVAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKG--FSNCPEESGRVIKGKILVGHALRNDLKALLLSH
        LT  +A+DCEMVGVG +G +S   RV++VN++G  +YD++V+P E V D+RT +SGIRP +LK+G  F    +E   ++KG+ILVGHAL NDLK L L H
Subjt:  LTDEVAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKG--FSNCPEESGRVIKGKILVGHALRNDLKALLLSH

Query:  PKNDVRDTSEYQFFQK--EGCKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKS
        PK  +RDT +++ F+   +  + +L+ L+ + LG+++Q  EHC ++DA++AM LY   ++EWE S
Subjt:  PKNDVRDTSEYQFFQK--EGCKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKS

Q91560 RNA exonuclease 42.1e-3946.49Show/hide
Query:  LTDEVAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKG--FSNCPEESGRVIKGKILVGHALRNDLKALLLSH
        LT  VAMDCEMVGVG  G +S L RV++VN +G  +YD++V+P ERV D+RT +SGIRP D+KKG  F    +E   +++G+ LVGHA+ NDLK L L H
Subjt:  LTDEVAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKG--FSNCPEESGRVIKGKILVGHALRNDLKALLLSH

Query:  PKNDVRDTSEYQFFQK--EGCKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQK--LKLKQKKRKPRK
        PK  +RDT +Y+ F++  +  + +L+ L  + L V++Q GEHC V+DA++AM LY  ++K WE ++KA+    + + +K + P+K
Subjt:  PKNDVRDTSEYQFFQK--EGCKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQK--LKLKQKKRKPRK

Q9GZR2 RNA exonuclease 41.8e-3847.09Show/hide
Query:  LTDEVAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKG--FSNCPEESGRVIKGKILVGHALRNDLKALLLSH
        LT  +A+DCEMVGVG +G +S   RV++VN++G  +YD++V+P E V D+RT +SGIRP +LK+G       +E   ++KG+ILVGHAL NDLK L L H
Subjt:  LTDEVAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKG--FSNCPEESGRVIKGKILVGHALRNDLKALLLSH

Query:  PKNDVRDTSEYQFF--QKEGCKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKL
        PK  +RDT +Y+ F  Q +  + +LR L+ + LG+Q+Q  EHC ++DA++AM LY   +KEWE   +  + L
Subjt:  PKNDVRDTSEYQFF--QKEGCKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKL

Arabidopsis top hitse value%identityAlignment
AT2G48100.1 Exonuclease family protein4.6e-1836.16Show/hide
Query:  VAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKGF--------------SNCPEESGRVIKGKILVGHALRND
        +A+DCEMVG G  G       V LV+   NVI+   V+P+  V D+R +I+G+   DLK G                   + +GR+    +LVGH LR+D
Subjt:  VAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKGF--------------SNCPEESGRVIKGKILVGHALRND

Query:  LKALLLSHPKNDVRDTSEYQFFQKEG-CKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKR-KEWEKSVKAE
        +  L L +P + +RDT++Y    K     ++L++L   +LG +IQ G+H   ED  SAM LY++ R +E   S KAE
Subjt:  LKALLLSHPKNDVRDTSEYQFFQKEG-CKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKR-KEWEKSVKAE

AT2G48100.2 Exonuclease family protein4.6e-1836.16Show/hide
Query:  VAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKGF--------------SNCPEESGRVIKGKILVGHALRND
        +A+DCEMVG G  G       V LV+   NVI+   V+P+  V D+R +I+G+   DLK G                   + +GR+    +LVGH LR+D
Subjt:  VAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKGF--------------SNCPEESGRVIKGKILVGHALRND

Query:  LKALLLSHPKNDVRDTSEYQFFQKEG-CKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKR-KEWEKSVKAE
        +  L L +P + +RDT++Y    K     ++L++L   +LG +IQ G+H   ED  SAM LY++ R +E   S KAE
Subjt:  LKALLLSHPKNDVRDTSEYQFFQKEG-CKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKR-KEWEKSVKAE

AT2G48100.3 Exonuclease family protein4.6e-1836.16Show/hide
Query:  VAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKGF--------------SNCPEESGRVIKGKILVGHALRND
        +A+DCEMVG G  G       V LV+   NVI+   V+P+  V D+R +I+G+   DLK G                   + +GR+    +LVGH LR+D
Subjt:  VAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKGF--------------SNCPEESGRVIKGKILVGHALRND

Query:  LKALLLSHPKNDVRDTSEYQFFQKEG-CKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKR-KEWEKSVKAE
        +  L L +P + +RDT++Y    K     ++L++L   +LG +IQ G+H   ED  SAM LY++ R +E   S KAE
Subjt:  LKALLLSHPKNDVRDTSEYQFFQKEG-CKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKR-KEWEKSVKAE

AT3G15080.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.1e-8362.12Show/hide
Query:  MTSQLKKNPKPKL------LNPNWAILQQKLKPHGSNHSKASTVP--------KSEERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSA
        M+S LK+ PK K+      LNPNW++LQQKLK     +++ S+ P        K +ER D E +  + N L PVNDD SLTDEVAMDCEMVGV QG KSA
Subjt:  MTSQLKKNPKPKL------LNPNWAILQQKLKPHGSNHSKASTVP--------KSEERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSA

Query:  LGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKG--FSNCPEESGRVIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEGCKRA
        LGRVTLVNKWGNV+YDEFVRP+E VVDFRT ISGIRP DL+K   F     +   +IKGKILVGHAL NDLKALLL+HPK D+RDT EYQ F K   +++
Subjt:  LGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKG--FSNCPEESGRVIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEGCKRA

Query:  LRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDG
        L+HLA+E LG  IQNGEHCP++DAR+AM+LYQK RKEWEK+VK + ++ LKQKKRKP+KK+K G
Subjt:  LRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDG

AT5G40310.1 Exonuclease family protein1.6e-1532.14Show/hide
Query:  VAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKGFS-----------NCPEE-----SGRVIKGKILVGHALR
        VA+ C+MVG G  G+     RV + ++  NV++  +V+P   V ++R +++GIRP +L+                C  E       R  K +ILVGH L 
Subjt:  VAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKGFS-----------NCPEE-----SGRVIKGKILVGHALR

Query:  NDLKALLLSHPKNDVRDTSEYQFFQKEG-CKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKR
        N L +L L +  + +RDT+EY    K      +L++L   +LG  I  G   P ED  + M LY + R
Subjt:  NDLKALLLSHPKNDVRDTSEYQFFQKEG-CKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATCTCAGCTCAAGAAGAACCCTAAACCCAAATTACTCAACCCCAATTGGGCAATACTCCAACAAAAGCTGAAACCCCATGGTTCAAATCATTCAAAGGCCTCTAC
TGTCCCGAAATCCGAAGAAAGATCTGATGTGGAGTCAAATCATTCCCAGAAGAATATCCTCATTCCGGTGAATGATGACTTTAGTCTTACAGATGAAGTAGCTATGGATT
GTGAAATGGTTGGAGTAGGTCAAGGTAACAAAAGTGCCCTTGGACGTGTTACACTGGTAAACAAATGGGGGAATGTTATATACGATGAGTTTGTACGCCCGATAGAGCGT
GTGGTTGACTTTCGGACCCAAATTAGTGGCATAAGACCCTGCGACTTGAAGAAAGGATTTTCCAACTGTCCAGAAGAGAGTGGCAGAGTGATTAAAGGAAAGATTCTTGT
TGGCCATGCCTTGCGTAATGATCTTAAGGCATTACTCTTGAGTCATCCCAAGAATGACGTGAGAGACACCTCCGAGTACCAATTCTTTCAGAAGGAAGGATGTAAAAGAG
CTCTCCGCCATCTTGCAGCCGAGTTTCTTGGTGTTCAGATCCAAAATGGGGAGCACTGTCCTGTAGAAGATGCTCGTTCTGCCATGCTGCTCTATCAGAAGAAAAGAAAA
GAGTGGGAAAAGAGTGTTAAAGCTGAACAAAAGCTTAAATTGAAGCAGAAAAAACGCAAGCCAAGGAAGAAATCCAAGGATGGAGGAGGTTTTGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGACATCTCAGCTCAAGAAGAACCCTAAACCCAAATTACTCAACCCCAATTGGGCAATACTCCAACAAAAGCTGAAACCCCATGGTTCAAATCATTCAAAGGCCTCTAC
TGTCCCGAAATCCGAAGAAAGATCTGATGTGGAGTCAAATCATTCCCAGAAGAATATCCTCATTCCGGTGAATGATGACTTTAGTCTTACAGATGAAGTAGCTATGGATT
GTGAAATGGTTGGAGTAGGTCAAGGTAACAAAAGTGCCCTTGGACGTGTTACACTGGTAAACAAATGGGGGAATGTTATATACGATGAGTTTGTACGCCCGATAGAGCGT
GTGGTTGACTTTCGGACCCAAATTAGTGGCATAAGACCCTGCGACTTGAAGAAAGGATTTTCCAACTGTCCAGAAGAGAGTGGCAGAGTGATTAAAGGAAAGATTCTTGT
TGGCCATGCCTTGCGTAATGATCTTAAGGCATTACTCTTGAGTCATCCCAAGAATGACGTGAGAGACACCTCCGAGTACCAATTCTTTCAGAAGGAAGGATGTAAAAGAG
CTCTCCGCCATCTTGCAGCCGAGTTTCTTGGTGTTCAGATCCAAAATGGGGAGCACTGTCCTGTAGAAGATGCTCGTTCTGCCATGCTGCTCTATCAGAAGAAAAGAAAA
GAGTGGGAAAAGAGTGTTAAAGCTGAACAAAAGCTTAAATTGAAGCAGAAAAAACGCAAGCCAAGGAAGAAATCCAAGGATGGAGGAGGTTTTGAATGA
Protein sequenceShow/hide protein sequence
MTSQLKKNPKPKLLNPNWAILQQKLKPHGSNHSKASTVPKSEERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGRVTLVNKWGNVIYDEFVRPIER
VVDFRTQISGIRPCDLKKGFSNCPEESGRVIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEGCKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRK
EWEKSVKAEQKLKLKQKKRKPRKKSKDGGGFE