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IVF0017403 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0017403
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationtig00000084_ERROPOS800000:696963..697169
RNA-Seq ExpressionIVF0017403
SyntenyIVF0017403
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0035196 - production of miRNAs involved in gene silencing by miRNA (biological process)
GO:1903730 - regulation of phosphatidate phosphatase activity (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033551.1 retrotransposon protein [Cucumis melo var. makuwa]1.12e-1883.33Show/hide
Query:  AQVIELIEVIPNLTMAEKSKCIVLVNQKVSLMRSFIKMSDSMKVAYCRILHGGD
        AQVIELIE IPNLTMAEKSKC++LVNQKVSLMRSFIKM DSMK  Y RIL GG+
Subjt:  AQVIELIEVIPNLTMAEKSKCIVLVNQKVSLMRSFIKMSDSMKVAYCRILHGGD
KAA0038274.1 retrotransposon protein [Cucumis melo var. makuwa]2.79e-2188.89Show/hide
Query:  AQVIELIEVIPNLTMAEKSKCIVLVNQKVSLMRSFIKMSDSMKVAYCRILHGGD
        AQVIELIE I NLTMAEKS C+VLVNQKVSLMRSFIKMSDSMK AYCRIL GGD
Subjt:  AQVIELIEVIPNLTMAEKSKCIVLVNQKVSLMRSFIKMSDSMKVAYCRILHGGD
KAA0048148.1 retrotransposon protein [Cucumis melo var. makuwa]1.62e-2081.82Show/hide
Query:  AQVIELIEVIPNLTMAEKSKCIVLVNQKVSLMRSFIKMSDSMKVAYCRILHGGDP
        AQVIELI+ I NLTMAEKSKC++LVNQKVSLMRSFIKM D MK AYCR+L GGDP
Subjt:  AQVIELIEVIPNLTMAEKSKCIVLVNQKVSLMRSFIKMSDSMKVAYCRILHGGDP
KAA0055070.1 retrotransposon protein [Cucumis melo var. makuwa]4.38e-2081.13Show/hide
Query:  QVIELIEVIPNLTMAEKSKCIVLVNQKVSLMRSFIKMSDSMKVAYCRILHGGD
        QVIEL+E+IPNLTMAEKSKCI+++NQKVSLMRSFIKMSDSM  AYC++L GGD
Subjt:  QVIELIEVIPNLTMAEKSKCIVLVNQKVSLMRSFIKMSDSMKVAYCRILHGGD
TYK19822.1 retrotransposon protein [Cucumis melo var. makuwa]4.03e-39100Show/hide
Query:  MAEEIYEPRGRDGAQVIELIEVIPNLTMAEKSKCIVLVNQKVSLMRSFIKMSDSMKVAYCRILHGGDP
        MAEEIYEPRGRDGAQVIELIEVIPNLTMAEKSKCIVLVNQKVSLMRSFIKMSDSMKVAYCRILHGGDP
Subjt:  MAEEIYEPRGRDGAQVIELIEVIPNLTMAEKSKCIVLVNQKVSLMRSFIKMSDSMKVAYCRILHGGDP
TrEMBL top hitse value%identityAlignment
A0A5A7T479 Retrotransposon protein7.7e-1688.89Show/hide
Query:  AQVIELIEVIPNLTMAEKSKCIVLVNQKVSLMRSFIKMSDSMKVAYCRILHGGD
        AQVIELIE I NLTMAEKS C+VLVNQKVSLMRSFIKMSDSMK AYCRIL GGD
Subjt:  AQVIELIEVIPNLTMAEKSKCIVLVNQKVSLMRSFIKMSDSMKVAYCRILHGGD
A0A5A7TYU4 Retrotransposon protein2.2e-1581.82Show/hide
Query:  AQVIELIEVIPNLTMAEKSKCIVLVNQKVSLMRSFIKMSDSMKVAYCRILHGGDP
        AQVIELI+ I NLTMAEKSKC++LVNQKVSLMRSFIKM D MK AYCR+L GGDP
Subjt:  AQVIELIEVIPNLTMAEKSKCIVLVNQKVSLMRSFIKMSDSMKVAYCRILHGGDP
A0A5D3B9T0 Retrotransposon protein4.2e-1483.33Show/hide
Query:  AQVIELIEVIPNLTMAEKSKCIVLVNQKVSLMRSFIKMSDSMKVAYCRILHGGD
        AQVIELIE IPNLTMAEKSKC++LVNQKVSLMRSFIKM DSMK  Y RIL GG+
Subjt:  AQVIELIEVIPNLTMAEKSKCIVLVNQKVSLMRSFIKMSDSMKVAYCRILHGGD
A0A5D3D8E2 Retrotransposon protein4.6e-29100Show/hide
Query:  MAEEIYEPRGRDGAQVIELIEVIPNLTMAEKSKCIVLVNQKVSLMRSFIKMSDSMKVAYCRILHGGDP
        MAEEIYEPRGRDGAQVIELIEVIPNLTMAEKSKCIVLVNQKVSLMRSFIKMSDSMKVAYCRILHGGDP
Subjt:  MAEEIYEPRGRDGAQVIELIEVIPNLTMAEKSKCIVLVNQKVSLMRSFIKMSDSMKVAYCRILHGGDP
A0A5D3DLC6 Retrotransposon protein3.8e-1581.13Show/hide
Query:  QVIELIEVIPNLTMAEKSKCIVLVNQKVSLMRSFIKMSDSMKVAYCRILHGGD
        QVIEL+E+IPNLTMAEKSKCI+++NQKVSLMRSFIKMSDSM  AYC++L GGD
Subjt:  QVIELIEVIPNLTMAEKSKCIVLVNQKVSLMRSFIKMSDSMKVAYCRILHGGD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGAAGAAATCTATGAGCCGAGAGGACGCGATGGGGCGCAGGTGATTGAGCTTATAGAGGTCATCCCGAACCTTACTATGGCAGAGAAGAGTAAGTGCATCGTGCT
AGTGAATCAGAAGGTGTCACTCATGAGAAGCTTTATCAAGATGTCCGATTCGATGAAGGTCGCTTACTGTAGGATCCTCCATGGTGGTGACCCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGAAGAAATCTATGAGCCGAGAGGACGCGATGGGGCGCAGGTGATTGAGCTTATAGAGGTCATCCCGAACCTTACTATGGCAGAGAAGAGTAAGTGCATCGTGCT
AGTGAATCAGAAGGTGTCACTCATGAGAAGCTTTATCAAGATGTCCGATTCGATGAAGGTCGCTTACTGTAGGATCCTCCATGGTGGTGACCCGTGA
Protein sequenceShow/hide protein sequence
MAEEIYEPRGRDGAQVIELIEVIPNLTMAEKSKCIVLVNQKVSLMRSFIKMSDSMKVAYCRILHGGDP