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IVF0017415 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0017415
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr08:19699284..19699487
RNA-Seq ExpressionIVF0017415
SyntenyIVF0017415
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049656.1 hypothetical protein E6C27_scaffold163G001250 [Cucumis melo var. makuwa]1.06e-1857.81Show/hide
Query:  KEVDEDYTFKFIDDYVCKPMNIGFDDVIQCQSSLQEMHLRSQNQLRDLQLKVDNTNAHSLAQIE
        +EVD  Y FKFID ++CKP+  GF+D  QCQS+LQEM LRSQ Q+ DL+LK+DN +A + AQ++
Subjt:  KEVDEDYTFKFIDDYVCKPMNIGFDDVIQCQSSLQEMHLRSQNQLRDLQLKVDNTNAHSLAQIE

KAA0054903.1 hypothetical protein E6C27_scaffold43052G00310 [Cucumis melo var. makuwa]1.06e-1868.97Show/hide
Query:  KEVDEDYTFKFIDDYVCKPMNIGFDDVIQCQSSLQEMHLRSQNQLRDLQLKVDNTNAH
        +E  EDY FKF+D YVCK M  GF++VIQCQ +LQEMHLRS  QL DL+LKVDN NAH
Subjt:  KEVDEDYTFKFIDDYVCKPMNIGFDDVIQCQSSLQEMHLRSQNQLRDLQLKVDNTNAH

KAA0063408.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]3.42e-1864.06Show/hide
Query:  KEVDEDYTFKFIDDYVCKPMNIGFDDVIQCQSSLQEMHLRSQNQLRDLQLKVDNTNAHSLAQIE
        + +DEDYT KFIDD+VCKPMN  F+ VI C S+L+EMHL  Q Q  DL+LK DNTNA++L QIE
Subjt:  KEVDEDYTFKFIDDYVCKPMNIGFDDVIQCQSSLQEMHLRSQNQLRDLQLKVDNTNAHSLAQIE

KGN49653.1 hypothetical protein Csa_018510 [Cucumis sativus]1.05e-2167.74Show/hide
Query:  DEDYTFKFIDDYVCKPMNIGFDDVIQCQSSLQEMHLRSQNQLRDLQLKVDNTNAHSLAQIEG
        DEDYT KF DDYVCKPM+ GF+D IQCQS+ QEMH +SQ QL D +LK+DN N H   QIEG
Subjt:  DEDYTFKFIDDYVCKPMNIGFDDVIQCQSSLQEMHLRSQNQLRDLQLKVDNTNAHSLAQIEG

TYK07283.1 hypothetical protein E5676_scaffold606G001830 [Cucumis melo var. makuwa]2.39e-2169.35Show/hide
Query:  DEDYTFKFIDDYVCKPMNIGFDDVIQCQSSLQEMHLRSQNQLRDLQLKVDNTNAHSLAQIEG
        DE+Y FKFIDDYVCKPM+ GF+DVIQCQS+LQ+MHL  Q QLRD ++K+ N N H  AQIEG
Subjt:  DEDYTFKFIDDYVCKPMNIGFDDVIQCQSSLQEMHLRSQNQLRDLQLKVDNTNAHSLAQIEG

TrEMBL top hitse value%identityAlignment
A0A0A0KJB9 Uncharacterized protein5.8e-1667.74Show/hide
Query:  DEDYTFKFIDDYVCKPMNIGFDDVIQCQSSLQEMHLRSQNQLRDLQLKVDNTNAHSLAQIEG
        DEDYT KF DDYVCKPM+ GF+D IQCQS+ QEMH +SQ QL D +LK+DN N H   QIEG
Subjt:  DEDYTFKFIDDYVCKPMNIGFDDVIQCQSSLQEMHLRSQNQLRDLQLKVDNTNAHSLAQIEG

A0A5A7V749 Ty3-gypsy retrotransposon protein3.2e-1464.06Show/hide
Query:  KEVDEDYTFKFIDDYVCKPMNIGFDDVIQCQSSLQEMHLRSQNQLRDLQLKVDNTNAHSLAQIE
        + +DEDYT KFIDD+VCKPMN  F+ VI C S+L+EMHL  Q Q  DL+LK DNTNA++L QIE
Subjt:  KEVDEDYTFKFIDDYVCKPMNIGFDDVIQCQSSLQEMHLRSQNQLRDLQLKVDNTNAHSLAQIE

A0A5D3C5U6 Uncharacterized protein5.8e-1669.35Show/hide
Query:  DEDYTFKFIDDYVCKPMNIGFDDVIQCQSSLQEMHLRSQNQLRDLQLKVDNTNAHSLAQIEG
        DE+Y FKFIDDYVCKPM+ GF+DVIQCQS+LQ+MHL  Q QLRD ++K+ N N H  AQIEG
Subjt:  DEDYTFKFIDDYVCKPMNIGFDDVIQCQSSLQEMHLRSQNQLRDLQLKVDNTNAHSLAQIEG

A0A5D3D645 Uncharacterized protein4.6e-1357.81Show/hide
Query:  KEVDEDYTFKFIDDYVCKPMNIGFDDVIQCQSSLQEMHLRSQNQLRDLQLKVDNTNAHSLAQIE
        +EVD  Y FKFID ++CKP+  GF+D  QCQS+LQEM LRSQ Q+ DL+LK+DN +A + AQ++
Subjt:  KEVDEDYTFKFIDDYVCKPMNIGFDDVIQCQSSLQEMHLRSQNQLRDLQLKVDNTNAHSLAQIE

A0A5D3DG66 Uncharacterized protein9.2e-1468.97Show/hide
Query:  KEVDEDYTFKFIDDYVCKPMNIGFDDVIQCQSSLQEMHLRSQNQLRDLQLKVDNTNAH
        +E  EDY FKF+D YVCK M  GF++VIQCQ +LQEMHLRS  QL DL+LKVDN NAH
Subjt:  KEVDEDYTFKFIDDYVCKPMNIGFDDVIQCQSSLQEMHLRSQNQLRDLQLKVDNTNAH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGAAAGAAGTTGATGAAGACTACACCTTCAAGTTCATTGATGATTATGTGTGCAAGCCAATGAACATTGGATTTGACGATGTAATCCAGTGCCAGAGTAGTCTTCA
GGAAATGCATCTTCGAAGTCAAAACCAATTACGTGATTTACAACTAAAGGTTGACAACACAAATGCCCATAGTCTAGCACAGATTGAAGGATAG
mRNA sequenceShow/hide mRNA sequence
ATGAGGAAAGAAGTTGATGAAGACTACACCTTCAAGTTCATTGATGATTATGTGTGCAAGCCAATGAACATTGGATTTGACGATGTAATCCAGTGCCAGAGTAGTCTTCA
GGAAATGCATCTTCGAAGTCAAAACCAATTACGTGATTTACAACTAAAGGTTGACAACACAAATGCCCATAGTCTAGCACAGATTGAAGGATAG
Protein sequenceShow/hide protein sequence
MRKEVDEDYTFKFIDDYVCKPMNIGFDDVIQCQSSLQEMHLRSQNQLRDLQLKVDNTNAHSLAQIEG