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IVF0017462 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0017462
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionReverse transcriptase
Genome locationchr04:17294320..17294529
RNA-Seq ExpressionIVF0017462
SyntenyIVF0017462
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0005488 - binding (molecular function)
GO:0016779 - nucleotidyltransferase activity (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036590.1 polyprotein [Cucumis melo var. makuwa]4.63e-1663.24Show/hide
Query:  MKLIKDYDCTITYHLGKANIIADALSIKIPSPRNRGRMALLRELKGFKTILKARTSGNLMARFQVKPT
        MKLIKDY  TI YH  KAN++AD  S K  +  NRG +ALLREL+GFK IL A  S NLMAR QVK T
Subjt:  MKLIKDYDCTITYHLGKANIIADALSIKIPSPRNRGRMALLRELKGFKTILKARTSGNLMARFQVKPT

KAA0054749.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]8.03e-1759.42Show/hide
Query:  MKLIKDYDCTITYHLGKANIIADALSIKIPSPRNRGRMALLRELKGFKTILKARTSGNLMARFQVKPTL
        M+LIKDY+ TI YH GKAN++A+ALS K PS   +GR+A ++EL+  K IL    +GNL+ARFQVKPTL
Subjt:  MKLIKDYDCTITYHLGKANIIADALSIKIPSPRNRGRMALLRELKGFKTILKARTSGNLMARFQVKPTL

KAA0058456.1 CCHC-type integrase [Cucumis melo var. makuwa]1.66e-40100Show/hide
Query:  MKLIKDYDCTITYHLGKANIIADALSIKIPSPRNRGRMALLRELKGFKTILKARTSGNLMARFQVKPTL
        MKLIKDYDCTITYHLGKANIIADALSIKIPSPRNRGRMALLRELKGFKTILKARTSGNLMARFQVKPTL
Subjt:  MKLIKDYDCTITYHLGKANIIADALSIKIPSPRNRGRMALLRELKGFKTILKARTSGNLMARFQVKPTL

KAA0059914.1 CCHC-type integrase [Cucumis melo var. makuwa]7.64e-2168.12Show/hide
Query:  MKLIKDYDCTITYHLGKANIIADALSIKIPSPRNRGRMALLRELKGFKTILKARTSGNLMARFQVKPTL
        M+LIKDYDCTI YHLGKAN+ ADALS K  S  N+G++ALL EL+  KTIL AR  GNL+ARFQ K TL
Subjt:  MKLIKDYDCTITYHLGKANIIADALSIKIPSPRNRGRMALLRELKGFKTILKARTSGNLMARFQVKPTL

KAA0067194.1 polyprotein [Cucumis melo var. makuwa]2.84e-2572.46Show/hide
Query:  MKLIKDYDCTITYHLGKANIIADALSIKIPSPRNRGRMALLRELKGFKTILKARTSGNLMARFQVKPTL
        MKLIKDYDCTI Y+  K N+IADALS K  SPRN+GRMALL++L+GFK +L A T GN MARFQVKPTL
Subjt:  MKLIKDYDCTITYHLGKANIIADALSIKIPSPRNRGRMALLRELKGFKTILKARTSGNLMARFQVKPTL

TrEMBL top hitse value%identityAlignment
A0A5A7UKK4 Reverse transcriptase3.1e-1254.17Show/hide
Query:  MKLIKDYDCTITYHLGKANIIADALSIKIPSPRNRG---RMALLRELKGFKTILKARTSGNLMARFQVKPTL
        ++LIKDYDCTI YH GKAN++ADALS K   P++     R+ALL EL+GFK ++    SG+L+A+FQV+ +L
Subjt:  MKLIKDYDCTITYHLGKANIIADALSIKIPSPRNRG---RMALLRELKGFKTILKARTSGNLMARFQVKPTL

A0A5A7UMR3 DNA/RNA polymerases superfamily protein8.0e-1359.42Show/hide
Query:  MKLIKDYDCTITYHLGKANIIADALSIKIPSPRNRGRMALLRELKGFKTILKARTSGNLMARFQVKPTL
        M+LIKDY+ TI YH GKAN++A+ALS K PS   +GR+A ++EL+  K IL    +GNL+ARFQVKPTL
Subjt:  MKLIKDYDCTITYHLGKANIIADALSIKIPSPRNRGRMALLRELKGFKTILKARTSGNLMARFQVKPTL

A0A5A7UWA6 CCHC-type integrase7.2e-30100Show/hide
Query:  MKLIKDYDCTITYHLGKANIIADALSIKIPSPRNRGRMALLRELKGFKTILKARTSGNLMARFQVKPTL
        MKLIKDYDCTITYHLGKANIIADALSIKIPSPRNRGRMALLRELKGFKTILKARTSGNLMARFQVKPTL
Subjt:  MKLIKDYDCTITYHLGKANIIADALSIKIPSPRNRGRMALLRELKGFKTILKARTSGNLMARFQVKPTL

A0A5A7VIK8 Polyprotein1.7e-1872.46Show/hide
Query:  MKLIKDYDCTITYHLGKANIIADALSIKIPSPRNRGRMALLRELKGFKTILKARTSGNLMARFQVKPTL
        MKLIKDYDCTI Y+  K N+IADALS K  SPRN+GRMALL++L+GFK +L A T GN MARFQVKPTL
Subjt:  MKLIKDYDCTITYHLGKANIIADALSIKIPSPRNRGRMALLRELKGFKTILKARTSGNLMARFQVKPTL

A0A5D3DMM3 CCHC-type integrase7.8e-1668.12Show/hide
Query:  MKLIKDYDCTITYHLGKANIIADALSIKIPSPRNRGRMALLRELKGFKTILKARTSGNLMARFQVKPTL
        M+LIKDYDCTI YHLGKAN+ ADALS K  S  N+G++ALL EL+  KTIL AR  GNL+ARFQ K TL
Subjt:  MKLIKDYDCTITYHLGKANIIADALSIKIPSPRNRGRMALLRELKGFKTILKARTSGNLMARFQVKPTL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCTCATTAAAGATTATGACTGCACTATCACATACCACCTTGGGAAAGCCAATATCATAGCTGACGCGTTAAGCATAAAGATCCCCAGCCCAAGGAACAGAGGGAG
AATGGCTCTATTAAGAGAACTAAAGGGCTTCAAAACAATACTAAAGGCAAGGACATCTGGAAACCTGATGGCGCGTTTTCAGGTGAAGCCTACGCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGCTCATTAAAGATTATGACTGCACTATCACATACCACCTTGGGAAAGCCAATATCATAGCTGACGCGTTAAGCATAAAGATCCCCAGCCCAAGGAACAGAGGGAG
AATGGCTCTATTAAGAGAACTAAAGGGCTTCAAAACAATACTAAAGGCAAGGACATCTGGAAACCTGATGGCGCGTTTTCAGGTGAAGCCTACGCTTTAG
Protein sequenceShow/hide protein sequence
MKLIKDYDCTITYHLGKANIIADALSIKIPSPRNRGRMALLRELKGFKTILKARTSGNLMARFQVKPTL