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IVF0017516 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0017516
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPMD domain-containing protein
Genome locationchr11:8925285..8925626
RNA-Seq ExpressionIVF0017516
SyntenyIVF0017516
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032489.1 myosin-1-like [Cucumis melo var. makuwa]1.89e-4197.22Show/hide
Query:  MKVGGKDIESLPSKEDPCPKVPLQKINSTYTPLKISEPPLDTSKRQTTGNPEPSQWVGEKVVSNFFQKIVLC
        MKVGGKDI SLPSKEDPCPKVPLQKINSTY PLKISEPPLDTSKRQTTGNPEPSQWVGEKVVSNFFQKIVLC
Subjt:  MKVGGKDIESLPSKEDPCPKVPLQKINSTYTPLKISEPPLDTSKRQTTGNPEPSQWVGEKVVSNFFQKIVLC

KAA0040874.1 hypothetical protein E6C27_scaffold345G00270 [Cucumis melo var. makuwa]1.65e-4068.14Show/hide
Query:  MGPHAVDSAIEEVGTSKTLVSKPVKQSLR-----------KMKVGGKDIESLPSKEDPCPKVPLQKINSTYTPLKISEPPLDTSKRQTTGNPEPSQWVGE
        MGPH VDSAI++VGTSKT +SKP KQSLR           KM V GKDI S PSK D CPKVPLQK+NST+ PLK SE PLDTS RQT  NPEPSQWVGE
Subjt:  MGPHAVDSAIEEVGTSKTLVSKPVKQSLR-----------KMKVGGKDIESLPSKEDPCPKVPLQKINSTYTPLKISEPPLDTSKRQTTGNPEPSQWVGE

Query:  KVVSNFFQKIVLC
         VVSNFF+K   C
Subjt:  KVVSNFFQKIVLC

KAA0053995.1 hypothetical protein E6C27_scaffold318G00420 [Cucumis melo var. makuwa]9.04e-3968.47Show/hide
Query:  PHAVDSAIEEVGTSKTLVSKPVKQSLR-----------KMKVGGKDIESLPSKEDPCPKVPLQKINSTYTPLKISEPPLDTSKRQTTGNPEPSQWVGEKV
        PH VDS IEEVGT KT VSKP +Q LR           KMK+G KDIES  SK D C KVPLQK++ TY PLKISEP LDTSKRQ TGNPEP QWVGEKV
Subjt:  PHAVDSAIEEVGTSKTLVSKPVKQSLR-----------KMKVGGKDIESLPSKEDPCPKVPLQKINSTYTPLKISEPPLDTSKRQTTGNPEPSQWVGEKV

Query:  VSNFFQKIVLC
        VS FFQK  LC
Subjt:  VSNFFQKIVLC

TYK03498.1 hypothetical protein E5676_scaffold121G001190 [Cucumis melo var. makuwa]1.21e-3768.14Show/hide
Query:  MGPHAVDSAIEEVGTSKTLVSKPVKQSLR-----------KMKVGGKDIESLPSKEDPCPKVPLQKINSTYTPLKISEPPLDTSKRQTTGNPEPSQWVGE
        MGPHAVDSAIEEVGTSKT +SK VKQSL            KM VGGKDI S PSK D CPK  LQK+NST+ PL  SE PL  S RQTT NP+PSQWV E
Subjt:  MGPHAVDSAIEEVGTSKTLVSKPVKQSLR-----------KMKVGGKDIESLPSKEDPCPKVPLQKINSTYTPLKISEPPLDTSKRQTTGNPEPSQWVGE

Query:  KVVSNFFQKIVLC
        KVVSNFF+K VLC
Subjt:  KVVSNFFQKIVLC

TYK16282.1 hypothetical protein E5676_scaffold21G00530 [Cucumis melo var. makuwa]1.54e-3768.75Show/hide
Query:  MGPHAVDSAIEEVGTSKTLVSKPVKQSLR-----------KMKVGGKDIESLPSKEDPCPKVPLQKINSTYTPLKISEPPLDTSKRQTTGNPEPSQWVGE
        MGPH VDSAIEEVGTSKTLVSKP K+SLR           KMKVGGKDIES PSK D CPKVPLQK++ST  PLK SE PLD S +    +PEPSQWVGE
Subjt:  MGPHAVDSAIEEVGTSKTLVSKPVKQSLR-----------KMKVGGKDIESLPSKEDPCPKVPLQKINSTYTPLKISEPPLDTSKRQTTGNPEPSQWVGE

Query:  KVVSNFFQKIVL
         VVSNFF+K  L
Subjt:  KVVSNFFQKIVL

TrEMBL top hitse value%identityAlignment
A0A5A7STH0 Myosin-1-like6.7e-3297.22Show/hide
Query:  MKVGGKDIESLPSKEDPCPKVPLQKINSTYTPLKISEPPLDTSKRQTTGNPEPSQWVGEKVVSNFFQKIVLC
        MKVGGKDI SLPSKEDPCPKVPLQKINSTY PLKISEPPLDTSKRQTTGNPEPSQWVGEKVVSNFFQKIVLC
Subjt:  MKVGGKDIESLPSKEDPCPKVPLQKINSTYTPLKISEPPLDTSKRQTTGNPEPSQWVGEKVVSNFFQKIVLC

A0A5A7TBN8 Uncharacterized protein3.0e-3268.14Show/hide
Query:  MGPHAVDSAIEEVGTSKTLVSKPVKQSLR-----------KMKVGGKDIESLPSKEDPCPKVPLQKINSTYTPLKISEPPLDTSKRQTTGNPEPSQWVGE
        MGPH VDSAI++VGTSKT +SKP KQSLR           KM V GKDI S PSK D CPKVPLQK+NST+ PLK SE PLDTS RQT  NPEPSQWVGE
Subjt:  MGPHAVDSAIEEVGTSKTLVSKPVKQSLR-----------KMKVGGKDIESLPSKEDPCPKVPLQKINSTYTPLKISEPPLDTSKRQTTGNPEPSQWVGE

Query:  KVVSNFFQKIVLC
         VVSNFF+K   C
Subjt:  KVVSNFFQKIVLC

A0A5A7TKG1 Uncharacterized protein3.7e-3068.14Show/hide
Query:  MGPHAVDSAIEEVGTSKTLVSKPVKQSLR-----------KMKVGGKDIESLPSKEDPCPKVPLQKINSTYTPLKISEPPLDTSKRQTTGNPEPSQWVGE
        MGPHAVDSAIEEVGTSKT +SK VKQSL            KM VGGKDI S PSK D CPK  LQK+NST+ PL  SE PL  S RQTT NP+PSQWV E
Subjt:  MGPHAVDSAIEEVGTSKTLVSKPVKQSLR-----------KMKVGGKDIESLPSKEDPCPKVPLQKINSTYTPLKISEPPLDTSKRQTTGNPEPSQWVGE

Query:  KVVSNFFQKIVLC
        KVVSNFF+K VLC
Subjt:  KVVSNFFQKIVLC

A0A5D3CXM9 Uncharacterized protein1.5e-3168.75Show/hide
Query:  MGPHAVDSAIEEVGTSKTLVSKPVKQSLR-----------KMKVGGKDIESLPSKEDPCPKVPLQKINSTYTPLKISEPPLDTSKRQTTGNPEPSQWVGE
        MGPH VDSAIEEVGTSKTLVSKP K+SLR           KMKVGGKDIES PSK D CPKVPLQK++ST  PLK SE PLD S +    +PEPSQWVGE
Subjt:  MGPHAVDSAIEEVGTSKTLVSKPVKQSLR-----------KMKVGGKDIESLPSKEDPCPKVPLQKINSTYTPLKISEPPLDTSKRQTTGNPEPSQWVGE

Query:  KVVSNFFQKIVL
         VVSNFF+K  L
Subjt:  KVVSNFFQKIVL

A0A5D3DB62 Uncharacterized protein2.8e-3068.47Show/hide
Query:  PHAVDSAIEEVGTSKTLVSKPVKQSLR-----------KMKVGGKDIESLPSKEDPCPKVPLQKINSTYTPLKISEPPLDTSKRQTTGNPEPSQWVGEKV
        PH VDS IEEVGT KT VSKP +Q LR           KMK+G KDIES  SK D C KVPLQK++ TY PLKISEP LDTSKRQ TGNPEP QWVGEKV
Subjt:  PHAVDSAIEEVGTSKTLVSKPVKQSLR-----------KMKVGGKDIESLPSKEDPCPKVPLQKINSTYTPLKISEPPLDTSKRQTTGNPEPSQWVGEKV

Query:  VSNFFQKIVLC
        VS FFQK  LC
Subjt:  VSNFFQKIVLC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACCTCATGCAGTTGATTCAGCCATTGAGGAAGTTGGTACCTCGAAGACTCTCGTTTCTAAACCAGTCAAACAGTCCCTACGCAAGATGAAAGTGGGAGGAAAAGA
CATTGAGAGTCTTCCATCCAAAGAAGATCCCTGCCCTAAAGTGCCCTTACAGAAGATCAACTCGACATATACACCTCTTAAGATTTCTGAACCACCTTTAGATACTTCTA
AGAGACAGACTACGGGAAACCCTGAGCCTTCTCAATGGGTTGGTGAAAAGGTGGTTTCAAACTTCTTCCAGAAAATAGTCTTATGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGACCTCATGCAGTTGATTCAGCCATTGAGGAAGTTGGTACCTCGAAGACTCTCGTTTCTAAACCAGTCAAACAGTCCCTACGCAAGATGAAAGTGGGAGGAAAAGA
CATTGAGAGTCTTCCATCCAAAGAAGATCCCTGCCCTAAAGTGCCCTTACAGAAGATCAACTCGACATATACACCTCTTAAGATTTCTGAACCACCTTTAGATACTTCTA
AGAGACAGACTACGGGAAACCCTGAGCCTTCTCAATGGGTTGGTGAAAAGGTGGTTTCAAACTTCTTCCAGAAAATAGTCTTATGCTAG
Protein sequenceShow/hide protein sequence
MGPHAVDSAIEEVGTSKTLVSKPVKQSLRKMKVGGKDIESLPSKEDPCPKVPLQKINSTYTPLKISEPPLDTSKRQTTGNPEPSQWVGEKVVSNFFQKIVLC