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IVF0017535 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0017535
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr04:18107119..18107586
RNA-Seq ExpressionIVF0017535
SyntenyIVF0017535
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037008.1 subtilisin-like protease SBT3.17 isoform X1 [Cucumis melo var. makuwa]1.33e-3554.69Show/hide
Query:  GFPANDGNDSEIPMIYGHLSEGRNASSRSKRKWGDQTTETVKIICNAIEYTNGQLKAIAKRSNVQRQADDASRAEVMSQLQGIPKLSTRDRVRLLWIIMH
        GF A    D ++  +    SEGRNASSRS RK G QT E V++I N +E+ N QLK IA+R   QRQA+D  RAEV+ QLQ IP+LS+R +V+L+ IIMH
Subjt:  GFPANDGNDSEIPMIYGHLSEGRNASSRSKRKWGDQTTETVKIICNAIEYTNGQLKAIAKRSNVQRQADDASRAEVMSQLQGIPKLSTRDRVRLLWIIMH

Query:  NVHNMRAFLEVPDELKLDYCTTMLEDNA
        +  +M AFL +P ELKL+YCT +LE+NA
Subjt:  NVHNMRAFLEVPDELKLDYCTTMLEDNA

KAA0060529.1 retrotransposon protein [Cucumis melo var. makuwa]4.42e-4552.76Show/hide
Query:  RACVETFVDVRSNVFEVYEGFPANDGNDSEIPMIYGH----------------LSEGRNASSRSKRKWGDQTTETVKIICNAIEYTNGQLKAIAKRSNVQ
        R CVETF DV SN  E YEGF A+DGND EIPM+Y                   +EGR  SS SKRK G Q  ET++II N +E++N +LKAI +  NVQ
Subjt:  RACVETFVDVRSNVFEVYEGFPANDGNDSEIPMIYGH----------------LSEGRNASSRSKRKWGDQTTETVKIICNAIEYTNGQLKAIAKRSNVQ

Query:  RQADDASRAEVMSQLQGIPKLSTRDRVRLLWIIMHNVHNMRAFLEVPDELKLDYCTTMLEDNA
        RQ   A   EV+ QLQ IP+LS  DRVR + I+M NV +M+AFL++ DELKLDYCT + +DNA
Subjt:  RQADDASRAEVMSQLQGIPKLSTRDRVRLLWIIMHNVHNMRAFLEVPDELKLDYCTTMLEDNA

KAA0065601.1 retrotransposon protein [Cucumis melo var. makuwa]1.05e-108100Show/hide
Query:  MFGKGRATRACVETFVDVRSNVFEVYEGFPANDGNDSEIPMIYGHLSEGRNASSRSKRKWGDQTTETVKIICNAIEYTNGQLKAIAKRSNVQRQADDASR
        MFGKGRATRACVETFVDVRSNVFEVYEGFPANDGNDSEIPMIYGHLSEGRNASSRSKRKWGDQTTETVKIICNAIEYTNGQLKAIAKRSNVQRQADDASR
Subjt:  MFGKGRATRACVETFVDVRSNVFEVYEGFPANDGNDSEIPMIYGHLSEGRNASSRSKRKWGDQTTETVKIICNAIEYTNGQLKAIAKRSNVQRQADDASR

Query:  AEVMSQLQGIPKLSTRDRVRLLWIIMHNVHNMRAFLEVPDELKLDYCTTMLEDNA
        AEVMSQLQGIPKLSTRDRVRLLWIIMHNVHNMRAFLEVPDELKLDYCTTMLEDNA
Subjt:  AEVMSQLQGIPKLSTRDRVRLLWIIMHNVHNMRAFLEVPDELKLDYCTTMLEDNA

KGN58436.1 hypothetical protein Csa_000900 [Cucumis sativus]1.28e-3461.9Show/hide
Query:  NASSRSKRKWGDQTTETVKIICNAIEYTNGQLKAIAKRSNVQRQADDASRAEVMSQLQGIPKLSTRDRVRLLWIIMHNVHNMRAFLEVPDELKLDYCTTM
        NASSRSKRK G QT ET+KII N ++Y N Q +AI +  +VQ Q+ DA  AEVM QLQ IP+LST DR  L+W +M NVH+M+A  E+ +ELKLDYCT M
Subjt:  NASSRSKRKWGDQTTETVKIICNAIEYTNGQLKAIAKRSNVQRQADDASRAEVMSQLQGIPKLSTRDRVRLLWIIMHNVHNMRAFLEVPDELKLDYCTTM

Query:  LEDNA
        LEDNA
Subjt:  LEDNA

TYK07171.1 retrotransposon protein [Cucumis melo var. makuwa]1.74e-10799.35Show/hide
Query:  MFGKGRATRACVETFVDVRSNVFEVYEGFPANDGNDSEIPMIYGHLSEGRNASSRSKRKWGDQTTETVKIICNAIEYTNGQLKAIAKRSNVQRQADDASR
        MFGKG ATRACVETFVDVRSNVFEVYEGFPANDGNDSEIPMIYGHLSEGRNASSRSKRKWGDQTTETVKIICNAIEYTNGQLKAIAKRSNVQRQADDASR
Subjt:  MFGKGRATRACVETFVDVRSNVFEVYEGFPANDGNDSEIPMIYGHLSEGRNASSRSKRKWGDQTTETVKIICNAIEYTNGQLKAIAKRSNVQRQADDASR

Query:  AEVMSQLQGIPKLSTRDRVRLLWIIMHNVHNMRAFLEVPDELKLDYCTTMLEDNA
        AEVMSQLQGIPKLSTRDRVRLLWIIMHNVHNMRAFLEVPDELKLDYCTTMLEDNA
Subjt:  AEVMSQLQGIPKLSTRDRVRLLWIIMHNVHNMRAFLEVPDELKLDYCTTMLEDNA

TrEMBL top hitse value%identityAlignment
A0A5A7SQU2 Putative nuclease HARBI11.2e-2744.71Show/hide
Query:  MFGKGRATRACVETFVDVRSNVFEVYEG-FPANDGNDSEIPMIY----------------GHLSEGRNASSRSKRKWGDQTTETVKIICNAIEYTNGQLK
        +FGK RATRA  ETF DV SNV  ++ G  P +D +D +IPM+Y                G  SE +N SS SKRK G +  ETV++I +AIE+ N QLK
Subjt:  MFGKGRATRACVETFVDVRSNVFEVYEG-FPANDGNDSEIPMIY----------------GHLSEGRNASSRSKRKWGDQTTETVKIICNAIEYTNGQLK

Query:  AIAKRSNVQRQADDASRAEVMSQLQGIPKLSTRDRVRLLWIIMHNVHNMRAFLEVPDELKLDYCTTMLED
        AIA     +R  +   RAEVM QLQ IP+L +RDR +L+ I+  +V  +  FL +P E KL+YC  +L++
Subjt:  AIAKRSNVQRQADDASRAEVMSQLQGIPKLSTRDRVRLLWIIMHNVHNMRAFLEVPDELKLDYCTTMLED

A0A5A7T2J7 Subtilisin-like protease SBT3.17 isoform X15.8e-2754.69Show/hide
Query:  GFPANDGNDSEIPMIYGHLSEGRNASSRSKRKWGDQTTETVKIICNAIEYTNGQLKAIAKRSNVQRQADDASRAEVMSQLQGIPKLSTRDRVRLLWIIMH
        GF A    D ++  +    SEGRNASSRS RK G QT E V++I N +E+ N QLK IA+R   QRQA+D  RAEV+ QLQ IP+LS+R +V+L+ IIMH
Subjt:  GFPANDGNDSEIPMIYGHLSEGRNASSRSKRKWGDQTTETVKIICNAIEYTNGQLKAIAKRSNVQRQADDASRAEVMSQLQGIPKLSTRDRVRLLWIIMH

Query:  NVHNMRAFLEVPDELKLDYCTTMLEDNA
        +  +M AFL +P ELKL+YCT +LE+NA
Subjt:  NVHNMRAFLEVPDELKLDYCTTMLEDNA

A0A5A7V469 Retrotransposon protein3.7e-3452.76Show/hide
Query:  RACVETFVDVRSNVFEVYEGFPANDGNDSEIPMIYG----------------HLSEGRNASSRSKRKWGDQTTETVKIICNAIEYTNGQLKAIAKRSNVQ
        R CVETF DV SN  E YEGF A+DGND EIPM+Y                   +EGR  SS SKRK G Q  ET++II N +E++N +LKAI +  NVQ
Subjt:  RACVETFVDVRSNVFEVYEGFPANDGNDSEIPMIYG----------------HLSEGRNASSRSKRKWGDQTTETVKIICNAIEYTNGQLKAIAKRSNVQ

Query:  RQADDASRAEVMSQLQGIPKLSTRDRVRLLWIIMHNVHNMRAFLEVPDELKLDYCTTMLEDNA
        RQ   A   EV+ QLQ IP+LS  DRVR + I+M NV +M+AFL++ DELKLDYCT + +DNA
Subjt:  RQADDASRAEVMSQLQGIPKLSTRDRVRLLWIIMHNVHNMRAFLEVPDELKLDYCTTMLEDNA

A0A5A7VIQ2 Retrotransposon protein1.7e-82100Show/hide
Query:  MFGKGRATRACVETFVDVRSNVFEVYEGFPANDGNDSEIPMIYGHLSEGRNASSRSKRKWGDQTTETVKIICNAIEYTNGQLKAIAKRSNVQRQADDASR
        MFGKGRATRACVETFVDVRSNVFEVYEGFPANDGNDSEIPMIYGHLSEGRNASSRSKRKWGDQTTETVKIICNAIEYTNGQLKAIAKRSNVQRQADDASR
Subjt:  MFGKGRATRACVETFVDVRSNVFEVYEGFPANDGNDSEIPMIYGHLSEGRNASSRSKRKWGDQTTETVKIICNAIEYTNGQLKAIAKRSNVQRQADDASR

Query:  AEVMSQLQGIPKLSTRDRVRLLWIIMHNVHNMRAFLEVPDELKLDYCTTMLEDNA
        AEVMSQLQGIPKLSTRDRVRLLWIIMHNVHNMRAFLEVPDELKLDYCTTMLEDNA
Subjt:  AEVMSQLQGIPKLSTRDRVRLLWIIMHNVHNMRAFLEVPDELKLDYCTTMLEDNA

A0A5D3C5I7 Retrotransposon protein1.4e-8199.35Show/hide
Query:  MFGKGRATRACVETFVDVRSNVFEVYEGFPANDGNDSEIPMIYGHLSEGRNASSRSKRKWGDQTTETVKIICNAIEYTNGQLKAIAKRSNVQRQADDASR
        MFGKG ATRACVETFVDVRSNVFEVYEGFPANDGNDSEIPMIYGHLSEGRNASSRSKRKWGDQTTETVKIICNAIEYTNGQLKAIAKRSNVQRQADDASR
Subjt:  MFGKGRATRACVETFVDVRSNVFEVYEGFPANDGNDSEIPMIYGHLSEGRNASSRSKRKWGDQTTETVKIICNAIEYTNGQLKAIAKRSNVQRQADDASR

Query:  AEVMSQLQGIPKLSTRDRVRLLWIIMHNVHNMRAFLEVPDELKLDYCTTMLEDNA
        AEVMSQLQGIPKLSTRDRVRLLWIIMHNVHNMRAFLEVPDELKLDYCTTMLEDNA
Subjt:  AEVMSQLQGIPKLSTRDRVRLLWIIMHNVHNMRAFLEVPDELKLDYCTTMLEDNA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGGGAAAGGTCGTGCTACGAGAGCATGCGTGGAGACATTTGTCGATGTCAGATCGAATGTGTTTGAAGTGTATGAGGGATTTCCCGCTAACGATGGAAATGATTC
GGAGATCCCTATGATCTATGGTCACTTAAGTGAGGGTAGGAATGCTTCAAGCAGAAGCAAGAGAAAGTGGGGAGACCAAACGACTGAAACTGTGAAAATCATTTGCAATG
CAATAGAATATACAAATGGCCAGTTGAAGGCCATTGCAAAAAGGTCGAATGTACAACGTCAAGCAGATGACGCCTCCCGTGCAGAAGTCATGAGCCAGTTGCAGGGAATC
CCTAAACTGAGTACCCGCGATAGAGTGCGCCTTTTGTGGATAATAATGCACAATGTCCACAACATGAGAGCATTTTTGGAGGTACCCGACGAGCTTAAATTGGACTACTG
CACGACCATGCTCGAAGATAATGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGGGAAAGGTCGTGCTACGAGAGCATGCGTGGAGACATTTGTCGATGTCAGATCGAATGTGTTTGAAGTGTATGAGGGATTTCCCGCTAACGATGGAAATGATTC
GGAGATCCCTATGATCTATGGTCACTTAAGTGAGGGTAGGAATGCTTCAAGCAGAAGCAAGAGAAAGTGGGGAGACCAAACGACTGAAACTGTGAAAATCATTTGCAATG
CAATAGAATATACAAATGGCCAGTTGAAGGCCATTGCAAAAAGGTCGAATGTACAACGTCAAGCAGATGACGCCTCCCGTGCAGAAGTCATGAGCCAGTTGCAGGGAATC
CCTAAACTGAGTACCCGCGATAGAGTGCGCCTTTTGTGGATAATAATGCACAATGTCCACAACATGAGAGCATTTTTGGAGGTACCCGACGAGCTTAAATTGGACTACTG
CACGACCATGCTCGAAGATAATGCTTGA
Protein sequenceShow/hide protein sequence
MFGKGRATRACVETFVDVRSNVFEVYEGFPANDGNDSEIPMIYGHLSEGRNASSRSKRKWGDQTTETVKIICNAIEYTNGQLKAIAKRSNVQRQADDASRAEVMSQLQGI
PKLSTRDRVRLLWIIMHNVHNMRAFLEVPDELKLDYCTTMLEDNA