; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0017565 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0017565
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr11:15010952..15011236
RNA-Seq ExpressionIVF0017565
SyntenyIVF0017565
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054822.1 hypothetical protein E6C27_scaffold437G001150 [Cucumis melo var. makuwa]1.07e-1449.4Show/hide
Query:  MGCMGCIGPHTTAACPLNTKNVAYVKSNPYSNTYIEGWIDHPNFSRGVKSKMLKDDKVANKTIIMAKYLANAKDNITKGHSIQ
        +GC+GC   HT  AC LN + + YVK++PYSNTY  GW DH NFS G + +    DKV  K II+ K+LA  KD I   H+ Q
Subjt:  MGCMGCIGPHTTAACPLNTKNVAYVKSNPYSNTYIEGWIDHPNFSRGVKSKMLKDDKVANKTIIMAKYLANAKDNITKGHSIQ

KAA0066652.1 uncharacterized protein E6C27_scaffold979G00840 [Cucumis melo var. makuwa]2.47e-2661.7Show/hide
Query:  MGCMGCIGPHTTAACPLNTKNVAYVKSNPYSNTYIEGWIDHPNFSRGVKSKMLKDDKVANKTIIMAKYLANAKDNITKGHSIQPNTTIITATLL
        +GC+GC GPH T  CP NT+ VAYVK++PY NTY  GW +H NFS GVKSK LK DK+A K II AK+LA AKD I  GH IQP+T     TLL
Subjt:  MGCMGCIGPHTTAACPLNTKNVAYVKSNPYSNTYIEGWIDHPNFSRGVKSKMLKDDKVANKTIIMAKYLANAKDNITKGHSIQPNTTIITATLL

TYJ99639.1 hypothetical protein E5676_scaffold562G00110 [Cucumis melo var. makuwa]4.31e-1448.19Show/hide
Query:  MGCMGCIGPHTTAACPLNTKNVAYVKSNPYSNTYIEGWIDHPNFSRGVKSKMLKDDKVANKTIIMAKYLANAKDNITKGHSIQ
        +GC+GC   HT  AC LN + + YVK++PYSNTY  GW +H NFS G + +    DKV  K II+ K+LA  KD I   H+ Q
Subjt:  MGCMGCIGPHTTAACPLNTKNVAYVKSNPYSNTYIEGWIDHPNFSRGVKSKMLKDDKVANKTIIMAKYLANAKDNITKGHSIQ

TYK02154.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa]1.96e-16100Show/hide
Query:  MLKDDKVANKTIIMAKYLANAKDNITKGHSIQPNTTIITATLL
        MLKDDKVANKTIIMAKYLANAKDNITKGHSIQPNTTIITATLL
Subjt:  MLKDDKVANKTIIMAKYLANAKDNITKGHSIQPNTTIITATLL

TYK11061.1 hypothetical protein E5676_scaffold73G00460 [Cucumis melo var. makuwa]1.30e-1750.6Show/hide
Query:  MGCMGCIGPHTTAACPLNTKNVAYVKSNPYSNTYIEGWIDHPNFSRGVKSKMLKDDKVANKTIIMAKYLANAKDNITKGHSIQ
        +GC+GC GPH T ACP N +  A+VK   +SNTY +GW +HPNFS GVK+K++K  + A K +I  K+LA +K N  + H+IQ
Subjt:  MGCMGCIGPHTTAACPLNTKNVAYVKSNPYSNTYIEGWIDHPNFSRGVKSKMLKDDKVANKTIIMAKYLANAKDNITKGHSIQ

TrEMBL top hitse value%identityAlignment
A0A5A7UG80 Uncharacterized protein1.3e-1049.4Show/hide
Query:  MGCMGCIGPHTTAACPLNTKNVAYVKSNPYSNTYIEGWIDHPNFSRGVKSKMLKDDKVANKTIIMAKYLANAKDNITKGHSIQ
        +GC+GC   HT  AC LN + + YVK++PYSNTY  GW DH NFS G +    + DKV  K II+ K+LA  KD I   H+ Q
Subjt:  MGCMGCIGPHTTAACPLNTKNVAYVKSNPYSNTYIEGWIDHPNFSRGVKSKMLKDDKVANKTIIMAKYLANAKDNITKGHSIQ

A0A5A7VE68 Uncharacterized protein8.4e-2161.7Show/hide
Query:  MGCMGCIGPHTTAACPLNTKNVAYVKSNPYSNTYIEGWIDHPNFSRGVKSKMLKDDKVANKTIIMAKYLANAKDNITKGHSIQPNTTIITATLL
        +GC+GC GPH T  CP NT+ VAYVK++PY NTY  GW +H NFS GVKSK LK DK+A K II AK+LA AKD I  GH IQP+T     TLL
Subjt:  MGCMGCIGPHTTAACPLNTKNVAYVKSNPYSNTYIEGWIDHPNFSRGVKSKMLKDDKVANKTIIMAKYLANAKDNITKGHSIQPNTTIITATLL

A0A5D3BKZ6 Uncharacterized protein3.9e-1048.19Show/hide
Query:  MGCMGCIGPHTTAACPLNTKNVAYVKSNPYSNTYIEGWIDHPNFSRGVKSKMLKDDKVANKTIIMAKYLANAKDNITKGHSIQ
        +GC+GC   HT  AC LN + + YVK++PYSNTY  GW +H NFS G +    + DKV  K II+ K+LA  KD I   H+ Q
Subjt:  MGCMGCIGPHTTAACPLNTKNVAYVKSNPYSNTYIEGWIDHPNFSRGVKSKMLKDDKVANKTIIMAKYLANAKDNITKGHSIQ

A0A5D3BSM7 Retrovirus-related Pol polyprotein from transposon 17.61.7e-13100Show/hide
Query:  MLKDDKVANKTIIMAKYLANAKDNITKGHSIQPNTTIITATLL
        MLKDDKVANKTIIMAKYLANAKDNITKGHSIQPNTTIITATLL
Subjt:  MLKDDKVANKTIIMAKYLANAKDNITKGHSIQPNTTIITATLL

A0A5D3CGY4 Uncharacterized protein3.8e-1350.6Show/hide
Query:  MGCMGCIGPHTTAACPLNTKNVAYVKSNPYSNTYIEGWIDHPNFSRGVKSKMLKDDKVANKTIIMAKYLANAKDNITKGHSIQ
        +GC+GC GPH T ACP N +  A+VK   +SNTY +GW +HPNFS GVK+K++K  + A K +I  K+LA +K N  + H+IQ
Subjt:  MGCMGCIGPHTTAACPLNTKNVAYVKSNPYSNTYIEGWIDHPNFSRGVKSKMLKDDKVANKTIIMAKYLANAKDNITKGHSIQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTGCATGGGATGCATAGGTCCCCATACTACTGCTGCATGCCCATTAAACACTAAAAATGTGGCATATGTCAAGAGCAACCCCTACTCAAACACATATATTGAAGG
GTGGATAGATCACCCAAATTTCAGCCGGGGGGTCAAGAGCAAAATGCTCAAAGATGACAAGGTGGCCAATAAAACAATTATCATGGCAAAGTACTTGGCTAACGCCAAAG
ATAATATAACAAAAGGCCATAGCATTCAGCCTAACACCACCATCATAACTGCAACCCTATTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTTGCATGGGATGCATAGGTCCCCATACTACTGCTGCATGCCCATTAAACACTAAAAATGTGGCATATGTCAAGAGCAACCCCTACTCAAACACATATATTGAAGG
GTGGATAGATCACCCAAATTTCAGCCGGGGGGTCAAGAGCAAAATGCTCAAAGATGACAAGGTGGCCAATAAAACAATTATCATGGCAAAGTACTTGGCTAACGCCAAAG
ATAATATAACAAAAGGCCATAGCATTCAGCCTAACACCACCATCATAACTGCAACCCTATTGTAG
Protein sequenceShow/hide protein sequence
MGCMGCIGPHTTAACPLNTKNVAYVKSNPYSNTYIEGWIDHPNFSRGVKSKMLKDDKVANKTIIMAKYLANAKDNITKGHSIQPNTTIITATLL