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IVF0017643 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0017643
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr03:899791..899967
RNA-Seq ExpressionIVF0017643
SyntenyIVF0017643
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046569.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]2.67e-1265.52Show/hide
Query:  MQKESEMTQREMRKPRFYHVKVDNEIRVTSEEGITLGAKSKAFRRILREEVHAPKRLR
        MQ+ES +T+RE  +PRFY+VKV N IRV  E+GI L AKS+AF RIL EEV+ PKRLR
Subjt:  MQKESEMTQREMRKPRFYHVKVDNEIRVTSEEGITLGAKSKAFRRILREEVHAPKRLR
TrEMBL top hitse value%identityAlignment
A0A5A7TZA6 Ty3-gypsy retrotransposon protein7.0e-1065.52Show/hide
Query:  MQKESEMTQREMRKPRFYHVKVDNEIRVTSEEGITLGAKSKAFRRILREEVHAPKRLR
        MQ+ES +T+RE  +PRFY+VKV N IRV  E+GI L AKS+AF RIL EEV+ PKRLR
Subjt:  MQKESEMTQREMRKPRFYHVKVDNEIRVTSEEGITLGAKSKAFRRILREEVHAPKRLR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAAAAGAGAGTGAGATGACGCAAAGAGAAATGCGTAAACCAAGATTCTATCACGTGAAGGTAGACAACGAGATAAGGGTAACTAGCGAGGAAGGCATTACATTGGG
AGCGAAGAGCAAGGCGTTTAGAAGGATACTGCGAGAAGAAGTGCATGCTCCTAAGAGATTGAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGCAAAAAGAGAGTGAGATGACGCAAAGAGAAATGCGTAAACCAAGATTCTATCACGTGAAGGTAGACAACGAGATAAGGGTAACTAGCGAGGAAGGCATTACATTGGG
AGCGAAGAGCAAGGCGTTTAGAAGGATACTGCGAGAAGAAGTGCATGCTCCTAAGAGATTGAGATGA
Protein sequenceShow/hide protein sequence
MQKESEMTQREMRKPRFYHVKVDNEIRVTSEEGITLGAKSKAFRRILREEVHAPKRLR