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IVF0017647 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0017647
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionReverse transcriptase
Genome locationchr03:19330252..19330503
RNA-Seq ExpressionIVF0017647
SyntenyIVF0017647
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031686.1 reverse transcriptase [Cucumis melo var. makuwa]2.59e-4398.8Show/hide
Query:  MGALKFLSVIQKKASHQKDALEKGLIFVNAVLNFKTTKSTIVYLGATHNFISKQEARRLELKIEKDTRKMKAMSSEALLIVGV
        MGALKFLSVIQKKASHQKDALEKGLIFVNAVLNFKTTKSTIVYLGATHNFISKQEARRLELKIEKDTRKMKAMSSEALLIVG+
Subjt:  MGALKFLSVIQKKASHQKDALEKGLIFVNAVLNFKTTKSTIVYLGATHNFISKQEARRLELKIEKDTRKMKAMSSEALLIVGV

KAA0046120.1 uncharacterized protein E6C27_scaffold157G00530 [Cucumis melo var. makuwa]1.42e-2278.12Show/hide
Query:  MGALKFLSVIQKKASHQKDALEKGLIFVNAVLNFKTTKSTIVYLGATHNFISKQEARRLELKIE
        MGALKFL  IQK ASHQKDA EKGL+FV+AV+N KT KST+V LGATHNFISK+EA RL+LKIE
Subjt:  MGALKFLSVIQKKASHQKDALEKGLIFVNAVLNFKTTKSTIVYLGATHNFISKQEARRLELKIE

KAA0062359.1 uncharacterized protein E6C27_scaffold154G001260 [Cucumis melo var. makuwa]2.10e-2365.48Show/hide
Query:  MGALKFLSVIQKKASHQKDALEKGLIFVNAVLNFKTTKSTIVYLGATHNFISK-QEARRLELKIEKDTRKMKAMSSEALLIVGV
        M  LKFLS IQKK SHQKDA EKGL+FV+A++N K  KST+V   ATHNFIS+ +EA +LEL+I+K+TRKMKA++S+  LIVGV
Subjt:  MGALKFLSVIQKKASHQKDALEKGLIFVNAVLNFKTTKSTIVYLGATHNFISK-QEARRLELKIEKDTRKMKAMSSEALLIVGV

KAA0065393.1 gag-asp_proteas domain-containing protein [Cucumis melo var. makuwa]6.79e-2669.88Show/hide
Query:  MGALKFLSVIQKKASHQKDALEKGLIFVNAVLNFKTTKSTIVYLGATHNFISKQEARRLELKIEKDTRKMKAMSSEALLIVGV
        MGALKFLS IQKKASHQKDA EKGL+FV+AV+  KT  ST+V   AT+NFIS+QEA +LELKIE  T K+KA++ EAL IVGV
Subjt:  MGALKFLSVIQKKASHQKDALEKGLIFVNAVLNFKTTKSTIVYLGATHNFISKQEARRLELKIEKDTRKMKAMSSEALLIVGV

XP_022154605.1 uncharacterized protein LOC111021829 [Momordica charantia]7.67e-2265.06Show/hide
Query:  MGALKFLSVIQKKASHQKDALEKGLIFVNAVLNFKTTKSTIVYLGATHNFISKQEARRLELKIEKDTRKMKAMSSEALLIVGV
        MGALKFLS IQK+ +  K   EKGL+FV+A +N    KS +V  GATHNFIS+QEA RL+L IEKDT KMKA++SEAL IVGV
Subjt:  MGALKFLSVIQKKASHQKDALEKGLIFVNAVLNFKTTKSTIVYLGATHNFISKQEARRLELKIEKDTRKMKAMSSEALLIVGV

TrEMBL top hitse value%identityAlignment
A0A5A7SNU7 Reverse transcriptase1.2e-3498.8Show/hide
Query:  MGALKFLSVIQKKASHQKDALEKGLIFVNAVLNFKTTKSTIVYLGATHNFISKQEARRLELKIEKDTRKMKAMSSEALLIVGV
        MGALKFLSVIQKKASHQKDALEKGLIFVNAVLNFKTTKSTIVYLGATHNFISKQEARRLELKIEKDTRKMKAMSSEALLIVG+
Subjt:  MGALKFLSVIQKKASHQKDALEKGLIFVNAVLNFKTTKSTIVYLGATHNFISKQEARRLELKIEKDTRKMKAMSSEALLIVGV

A0A5A7TSJ2 RT_RNaseH_2 domain-containing protein3.8e-1778.12Show/hide
Query:  MGALKFLSVIQKKASHQKDALEKGLIFVNAVLNFKTTKSTIVYLGATHNFISKQEARRLELKIE
        MGALKFL  IQK ASHQKDA EKGL+FV+AV+N KT KST+V LGATHNFISK+EA RL+LKIE
Subjt:  MGALKFLSVIQKKASHQKDALEKGLIFVNAVLNFKTTKSTIVYLGATHNFISKQEARRLELKIE

A0A5A7V9H9 RT_RNaseH_2 domain-containing protein3.4e-1865.48Show/hide
Query:  MGALKFLSVIQKKASHQKDALEKGLIFVNAVLNFKTTKSTIVYLGATHNFISK-QEARRLELKIEKDTRKMKAMSSEALLIVGV
        M  LKFLS IQKK SHQKDA EKGL+FV+A++N K  KST+V   ATHNFIS+ +EA +LEL+I+K+TRKMKA++S+  LIVGV
Subjt:  MGALKFLSVIQKKASHQKDALEKGLIFVNAVLNFKTTKSTIVYLGATHNFISK-QEARRLELKIEKDTRKMKAMSSEALLIVGV

A0A5D3DZI9 Gag-asp_proteas domain-containing protein4.5e-1869.88Show/hide
Query:  MGALKFLSVIQKKASHQKDALEKGLIFVNAVLNFKTTKSTIVYLGATHNFISKQEARRLELKIEKDTRKMKAMSSEALLIVGV
        MGALKFLS IQKKASHQKDA EKGL+FV+AV+  KT  ST+V   AT+NFIS+QEA +LELKIE  T K+KA++ EAL IVGV
Subjt:  MGALKFLSVIQKKASHQKDALEKGLIFVNAVLNFKTTKSTIVYLGATHNFISKQEARRLELKIEKDTRKMKAMSSEALLIVGV

A0A6J1DK29 uncharacterized protein LOC1110218293.8e-1765.06Show/hide
Query:  MGALKFLSVIQKKASHQKDALEKGLIFVNAVLNFKTTKSTIVYLGATHNFISKQEARRLELKIEKDTRKMKAMSSEALLIVGV
        MGALKFLS IQK+ +  K   EKGL+FV+A +N    KS +V  GATHNFIS+QEA RL+L IEKDT KMKA++SEAL IVGV
Subjt:  MGALKFLSVIQKKASHQKDALEKGLIFVNAVLNFKTTKSTIVYLGATHNFISKQEARRLELKIEKDTRKMKAMSSEALLIVGV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGCGTTAAAATTTTTATCGGTAATCCAAAAGAAGGCATCTCATCAGAAAGATGCTCTTGAGAAGGGACTCATATTTGTTAACGCAGTCTTAAACTTCAAAACAAC
AAAGAGCACCATAGTATACTTAGGTGCAACTCACAACTTCATTTCTAAACAAGAAGCACGTCGATTGGAATTAAAGATTGAGAAGGATACAAGAAAGATGAAAGCTATGA
GCTCTGAAGCCTTGCTAATTGTTGGGGTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGCGTTAAAATTTTTATCGGTAATCCAAAAGAAGGCATCTCATCAGAAAGATGCTCTTGAGAAGGGACTCATATTTGTTAACGCAGTCTTAAACTTCAAAACAAC
AAAGAGCACCATAGTATACTTAGGTGCAACTCACAACTTCATTTCTAAACAAGAAGCACGTCGATTGGAATTAAAGATTGAGAAGGATACAAGAAAGATGAAAGCTATGA
GCTCTGAAGCCTTGCTAATTGTTGGGGTATAA
Protein sequenceShow/hide protein sequence
MGALKFLSVIQKKASHQKDALEKGLIFVNAVLNFKTTKSTIVYLGATHNFISKQEARRLELKIEKDTRKMKAMSSEALLIVGV