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IVF0017659 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0017659
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRING-type E3 ubiquitin transferase
Genome locationchr12:1823699..1824169
RNA-Seq ExpressionIVF0017659
SyntenyIVF0017659
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067736.1 RING-H2 finger protein ATL52-like [Cucumis melo var. makuwa]6.24e-10099.33Show/hide
Query:  MGFLFVSVVCIILIIFLFHIYHYRLRLNQTRTLDIEQRLHEHRTMQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVMKVAYKVKDNEAGGSYCCCAIC
        MGFLFVSVVCIILIIFLFHIYHYRLRLNQTRTLDIEQRLHEHRTMQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVM VAYKVKDNEAGGSYCCCAIC
Subjt:  MGFLFVSVVCIILIIFLFHIYHYRLRLNQTRTLDIEQRLHEHRTMQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVMKVAYKVKDNEAGGSYCCCAIC

Query:  IEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQQY
        IEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQQY
Subjt:  IEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQQY

KAG6583431.1 RING-H2 finger protein ATL5, partial [Cucurbita argyrosperma subsp. sororia]6.59e-3751.28Show/hide
Query:  NNQKMGFLFVSVVCII--LIIFLFHIYHYRLRLNQTRTLDIEQRLHEHRTMQLLAQTQAEIIRQRQTTTQS--NDTTEGEETSSAVMKVAYK-VKDNEAG
        +++ MG + +S + II  L IF+F  YH  L   QTR LD+EQ  H  R   L A+ +AE +RQ+Q+         T  EE +S V KVAYK +K  E  
Subjt:  NNQKMGFLFVSVVCII--LIIFLFHIYHYRLRLNQTRTLDIEQRLHEHRTMQLLAQTQAEIIRQRQTTTQS--NDTTEGEETSSAVMKVAYK-VKDNEAG

Query:  GSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQ
         S  CCAICIE F++EEICGV++ CGHCFH+ C+DQWL IESRCPLCRCLV  VS+
Subjt:  GSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQ

TYJ97407.1 RING-H2 finger protein ATL52-like [Cucumis melo var. makuwa]7.59e-101100Show/hide
Query:  MGFLFVSVVCIILIIFLFHIYHYRLRLNQTRTLDIEQRLHEHRTMQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVMKVAYKVKDNEAGGSYCCCAIC
        MGFLFVSVVCIILIIFLFHIYHYRLRLNQTRTLDIEQRLHEHRTMQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVMKVAYKVKDNEAGGSYCCCAIC
Subjt:  MGFLFVSVVCIILIIFLFHIYHYRLRLNQTRTLDIEQRLHEHRTMQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVMKVAYKVKDNEAGGSYCCCAIC

Query:  IEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQQY
        IEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQQY
Subjt:  IEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQQY

XP_016902103.1 PREDICTED: RING-H2 finger protein ATL52-like [Cucumis melo]1.29e-69100Show/hide
Query:  MQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVMKVAYKVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHA
        MQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVMKVAYKVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHA
Subjt:  MQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVMKVAYKVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHA

Query:  VSQQY
        VSQQY
Subjt:  VSQQY

XP_023520574.1 RING-H2 finger protein ATL64-like [Cucurbita pepo subsp. pepo]4.05e-3850.64Show/hide
Query:  NNQKMGFLFVSVVCIILI--IFLFHIYHYRLRLNQTRTLDIEQRLHEHRTMQLLAQTQAEIIRQRQT--TTQSNDTTEGEETSSAVMKVAYK-VKDNEAG
        +++ MG + +S + II+   IF+F  YH R   NQTR LD+EQ  H  R   L A+ +AE++R++ +  TT     T  EE +S V KVAYK +K  E  
Subjt:  NNQKMGFLFVSVVCIILI--IFLFHIYHYRLRLNQTRTLDIEQRLHEHRTMQLLAQTQAEIIRQRQT--TTQSNDTTEGEETSSAVMKVAYK-VKDNEAG

Query:  GSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQ
         S  CCAICIE FE++EICGV++ CGHCFH+ C+DQWL I+SRCPLCRCLV  VS+
Subjt:  GSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQ

TrEMBL top hitse value%identityAlignment
A0A1S4E1K2 RING-type E3 ubiquitin transferase1.6e-53100Show/hide
Query:  MQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVMKVAYKVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHA
        MQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVMKVAYKVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHA
Subjt:  MQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVMKVAYKVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHA

Query:  VSQQY
        VSQQY
Subjt:  VSQQY

A0A5A7VMH1 RING-H2 finger protein ATL52-like4.7e-7799.33Show/hide
Query:  MGFLFVSVVCIILIIFLFHIYHYRLRLNQTRTLDIEQRLHEHRTMQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVMKVAYKVKDNEAGGSYCCCAIC
        MGFLFVSVVCIILIIFLFHIYHYRLRLNQTRTLDIEQRLHEHRTMQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVM VAYKVKDNEAGGSYCCCAIC
Subjt:  MGFLFVSVVCIILIIFLFHIYHYRLRLNQTRTLDIEQRLHEHRTMQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVMKVAYKVKDNEAGGSYCCCAIC

Query:  IEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQQY
        IEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQQY
Subjt:  IEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQQY

A0A5D3BE50 RING-type E3 ubiquitin transferase9.5e-78100Show/hide
Query:  MGFLFVSVVCIILIIFLFHIYHYRLRLNQTRTLDIEQRLHEHRTMQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVMKVAYKVKDNEAGGSYCCCAIC
        MGFLFVSVVCIILIIFLFHIYHYRLRLNQTRTLDIEQRLHEHRTMQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVMKVAYKVKDNEAGGSYCCCAIC
Subjt:  MGFLFVSVVCIILIIFLFHIYHYRLRLNQTRTLDIEQRLHEHRTMQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVMKVAYKVKDNEAGGSYCCCAIC

Query:  IEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQQY
        IEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQQY
Subjt:  IEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQQY

A0A6J1HJU0 RING-type E3 ubiquitin transferase9.9e-2748.72Show/hide
Query:  NNQKMGFLFVSVVCII--LIIFLFHIYHYRLRLNQTRTLDIEQRLHEHRTMQLLAQTQAEIIRQRQT--TTQSNDTTEGEETSSAVMKVAYK-VKDNEAG
        +++ MG + +S + II  L IF+F  YH  L   QTR LD+EQ  H  R   L A+ +AE ++Q+Q+         T  EE +S V KVAY+ +K  E  
Subjt:  NNQKMGFLFVSVVCII--LIIFLFHIYHYRLRLNQTRTLDIEQRLHEHRTMQLLAQTQAEIIRQRQT--TTQSNDTTEGEETSSAVMKVAYK-VKDNEAG

Query:  GSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQ
             CAICIE FE+EEICGV++ CGHCFH+ C+DQWLRI SRCPLCRCL+  VS+
Subjt:  GSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQ

A0A6J1I5C3 RING-type E3 ubiquitin transferase4.0e-2850Show/hide
Query:  NNQKMGFLFVSVVCII--LIIFLFHIYHYRLRLNQTRTLDIEQRLHEHRTMQLLAQTQAEIIRQRQT--TTQSNDTTEGEETSSAVMKVAYK-VKDNEAG
        ++Q MG + +  + II  L IF+F  YH R  L QTR LD+EQ  H  R   L A+ +AE++RQ+Q+         T  EE +S V KVAY+ +K  +  
Subjt:  NNQKMGFLFVSVVCII--LIIFLFHIYHYRLRLNQTRTLDIEQRLHEHRTMQLLAQTQAEIIRQRQT--TTQSNDTTEGEETSSAVMKVAYK-VKDNEAG

Query:  GSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQ
         S  CCAICIE FE+EEICGVV+ C HCFH+ C+D+WL I SRCPLCRCLV  VS+
Subjt:  GSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQ

SwissProt top hitse value%identityAlignment
O22255 RING-H2 finger protein ATL642.0e-0850Show/hide
Query:  CAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLV
        C++C+ EFE+E+   ++  CGH FH DC+D W R  S CPLCR  V
Subjt:  CAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLV

Q8W571 RING-H2 finger protein ATL324.5e-0840.62Show/hide
Query:  VKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQQ
        VK+++ G     CAIC+ E ED E   ++  C H FH DC+D WL   + CP+CR  + A S +
Subjt:  VKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQQ

Q9C7I1 RING-H2 finger protein ATL343.4e-0846.43Show/hide
Query:  KVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCR
        +VK  + G     CAIC+ EFEDEE   ++  C H FH  C+D WL   S CP+CR
Subjt:  KVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCR

Q9LF64 RING-H2 finger protein ATL526.9e-0934.57Show/hide
Query:  TTEGEETSSAVMK--VAYKVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVS
        +T G+  + +++K    YK K  +       C++C+ EFE+ E   ++  C H FH  C+D WL+  S CPLCR  V  V+
Subjt:  TTEGEETSSAVMK--VAYKVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVS

Q9LSW9 RING-H2 finger protein ATL162.0e-0847.83Show/hide
Query:  CAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLV
        C++C+ EF+DEE   ++ +C H FH DC+D WL+  + CPLCR  V
Subjt:  CAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLV

Arabidopsis top hitse value%identityAlignment
AT1G35330.1 RING/U-box superfamily protein2.4e-0946.43Show/hide
Query:  KVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCR
        +VK  + G     CAIC+ EFEDEE   ++  C H FH  C+D WL   S CP+CR
Subjt:  KVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCR

AT2G47560.1 RING/U-box superfamily protein1.4e-0950Show/hide
Query:  CAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLV
        C++C+ EFE+E+   ++  CGH FH DC+D W R  S CPLCR  V
Subjt:  CAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLV

AT5G17600.1 RING/U-box superfamily protein4.9e-1034.57Show/hide
Query:  TTEGEETSSAVMK--VAYKVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVS
        +T G+  + +++K    YK K  +       C++C+ EFE+ E   ++  C H FH  C+D WL+  S CPLCR  V  V+
Subjt:  TTEGEETSSAVMK--VAYKVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVS

AT5G43420.1 RING/U-box superfamily protein1.4e-0947.83Show/hide
Query:  CAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLV
        C++C+ EF+DEE   ++ +C H FH DC+D WL+  + CPLCR  V
Subjt:  CAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLV

AT5G53110.1 RING/U-box superfamily protein2.9e-1048.84Show/hide
Query:  CAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCR
        CAIC+ E+E +E    +  C HCFH DC+D+WL++   CP+CR
Subjt:  CAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTCCAACAACCAAAAGATGGGATTCTTGTTCGTGAGCGTCGTTTGTATCATTTTAATCATCTTCCTTTTTCATATCTACCATTACCGCCTTAGGCTTAACCAAAC
AAGAACCCTAGACATCGAGCAACGACTCCACGAACACCGTACAATGCAACTCCTTGCTCAAACTCAAGCCGAAATCATAAGGCAACGGCAGACTACGACGCAATCGAATG
ACACCACGGAAGGCGAGGAAACTTCTTCTGCTGTCATGAAGGTCGCTTACAAAGTGAAGGATAATGAAGCCGGCGGGTCGTACTGTTGTTGTGCCATATGCATTGAAGAG
TTTGAGGATGAAGAGATTTGTGGAGTTGTTGAGAGTTGTGGCCATTGTTTTCATGAGGATTGTATGGATCAGTGGCTTAGGATTGAGAGCCGTTGCCCATTATGTCGTTG
TTTGGTTCATGCTGTATCTCAACAATATTAG
mRNA sequenceShow/hide mRNA sequence
ATGATTTCCAACAACCAAAAGATGGGATTCTTGTTCGTGAGCGTCGTTTGTATCATTTTAATCATCTTCCTTTTTCATATCTACCATTACCGCCTTAGGCTTAACCAAAC
AAGAACCCTAGACATCGAGCAACGACTCCACGAACACCGTACAATGCAACTCCTTGCTCAAACTCAAGCCGAAATCATAAGGCAACGGCAGACTACGACGCAATCGAATG
ACACCACGGAAGGCGAGGAAACTTCTTCTGCTGTCATGAAGGTCGCTTACAAAGTGAAGGATAATGAAGCCGGCGGGTCGTACTGTTGTTGTGCCATATGCATTGAAGAG
TTTGAGGATGAAGAGATTTGTGGAGTTGTTGAGAGTTGTGGCCATTGTTTTCATGAGGATTGTATGGATCAGTGGCTTAGGATTGAGAGCCGTTGCCCATTATGTCGTTG
TTTGGTTCATGCTGTATCTCAACAATATTAG
Protein sequenceShow/hide protein sequence
MISNNQKMGFLFVSVVCIILIIFLFHIYHYRLRLNQTRTLDIEQRLHEHRTMQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVMKVAYKVKDNEAGGSYCCCAICIEE
FEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQQY