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IVF0017696 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0017696
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr01:13927543..13927845
RNA-Seq ExpressionIVF0017696
SyntenyIVF0017696
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037894.1 hypothetical protein E6C27_scaffold36G00630 [Cucumis melo var. makuwa]4.61e-1869.35Show/hide
Query:  TSEVAKKTSLPSSPKQTQKPTTQNTKQKEAARDDKDDKDYFFKFIDDQVCKPLGSGFQDVFQ
        T +VA KTSLPS  K+T   TT+N +QKE  RDD+D KDYFFKFIDD +CKPLGSGF+DVFQ
Subjt:  TSEVAKKTSLPSSPKQTQKPTTQNTKQKEAARDDKDDKDYFFKFIDDQVCKPLGSGFQDVFQ

KAA0043584.1 hypothetical protein E6C27_scaffold320G00130 [Cucumis melo var. makuwa]1.90e-2158.89Show/hide
Query:  KKTTSEVAKKTSLPSSPKQTQKPTTQNTKQKEAARDDKDDKDYFFKFIDDQVCKPLGSGFQDVFQCQSNLQEMQYRHKKQSKGLELKVDN
        K+  SE A KT  PS PKQ+ KPT Q+TKQKEA RDD DD +Y+FKFI++ V +PL  GF+DVFQCQ+NLQE Q +++K  + LELK D+
Subjt:  KKTTSEVAKKTSLPSSPKQTQKPTTQNTKQKEAARDDKDDKDYFFKFIDDQVCKPLGSGFQDVFQCQSNLQEMQYRHKKQSKGLELKVDN

KAA0056630.1 hypothetical protein E6C27_scaffold288G001510 [Cucumis melo var. makuwa]5.03e-1766.15Show/hide
Query:  KKTTSEVAKKTSLPSSPKQTQKPTTQNTKQKEAARDDKDDKDYFFKFIDDQVCKPLGSGFQDVFQ
        K+TTSE A KTSLP  PKQT++P TQN KQKE  RDD+D +DY FKFI+D +CKP+G+GF+ VFQ
Subjt:  KKTTSEVAKKTSLPSSPKQTQKPTTQNTKQKEAARDDKDDKDYFFKFIDDQVCKPLGSGFQDVFQ

TYK23271.1 hypothetical protein E5676_scaffold142G003250 [Cucumis melo var. makuwa]2.69e-60100Show/hide
Query:  MTHSKREKKTTSEVAKKTSLPSSPKQTQKPTTQNTKQKEAARDDKDDKDYFFKFIDDQVCKPLGSGFQDVFQCQSNLQEMQYRHKKQSKGLELKVDNTRA
        MTHSKREKKTTSEVAKKTSLPSSPKQTQKPTTQNTKQKEAARDDKDDKDYFFKFIDDQVCKPLGSGFQDVFQCQSNLQEMQYRHKKQSKGLELKVDNTRA
Subjt:  MTHSKREKKTTSEVAKKTSLPSSPKQTQKPTTQNTKQKEAARDDKDDKDYFFKFIDDQVCKPLGSGFQDVFQCQSNLQEMQYRHKKQSKGLELKVDNTRA

TYK29776.1 hypothetical protein E5676_scaffold2208G00350 [Cucumis melo var. makuwa]7.22e-2258.89Show/hide
Query:  KKTTSEVAKKTSLPSSPKQTQKPTTQNTKQKEAARDDKDDKDYFFKFIDDQVCKPLGSGFQDVFQCQSNLQEMQYRHKKQSKGLELKVDN
        K+  SE A KT  PS PKQ+ KPT Q+TKQKEA RDD DD +Y+FKFI++ V +PL  GF+DVFQCQ+NLQE Q +++K  + LELK D+
Subjt:  KKTTSEVAKKTSLPSSPKQTQKPTTQNTKQKEAARDDKDDKDYFFKFIDDQVCKPLGSGFQDVFQCQSNLQEMQYRHKKQSKGLELKVDN

TrEMBL top hitse value%identityAlignment
A0A5A7TJU0 Uncharacterized protein2.1e-1756.99Show/hide
Query:  KREKKTTSEVAKKTSLPSSPKQTQKPTTQNTKQKEAARDDKDDKDYFFKFIDDQVCKPLGSGFQDVFQCQSNLQEMQYRHKKQSKGLELKVDN
        ++ K+  SE A KT  PS PKQ+ KPT Q+TKQKEA RDD DD +Y+FKFI++ V +PL  GF+DVFQCQ+NLQE Q +++K  + LELK D+
Subjt:  KREKKTTSEVAKKTSLPSSPKQTQKPTTQNTKQKEAARDDKDDKDYFFKFIDDQVCKPLGSGFQDVFQCQSNLQEMQYRHKKQSKGLELKVDN

A0A5A7UNI4 Uncharacterized protein4.0e-1363.24Show/hide
Query:  KREKKTTSEVAKKTSLPSSPKQTQKPTTQNTKQKEAARDDKDDKDYFFKFIDDQVCKPLGSGFQDVFQ
        ++ K+TTSE A KTSLP  PKQT++P TQN KQKE  RDD+D +DY FKFI+D +CKP+G+GF+ VFQ
Subjt:  KREKKTTSEVAKKTSLPSSPKQTQKPTTQNTKQKEAARDDKDDKDYFFKFIDDQVCKPLGSGFQDVFQ

A0A5D3BIL3 Uncharacterized protein6.8e-1364.71Show/hide
Query:  KREKKTTSEVAKKTSLPSSPKQTQKPTTQNTKQKEAARDDKDDKDYFFKFIDDQVCKPLGSGFQDVFQ
        ++ K  T +VA KTSLPS  K+T   TT+N +QKE  RDD+D KDYFFKFIDD +CKPLGSGF+DVFQ
Subjt:  KREKKTTSEVAKKTSLPSSPKQTQKPTTQNTKQKEAARDDKDDKDYFFKFIDDQVCKPLGSGFQDVFQ

A0A5D3DHY1 Uncharacterized protein6.1e-46100Show/hide
Query:  MTHSKREKKTTSEVAKKTSLPSSPKQTQKPTTQNTKQKEAARDDKDDKDYFFKFIDDQVCKPLGSGFQDVFQCQSNLQEMQYRHKKQSKGLELKVDNTRA
        MTHSKREKKTTSEVAKKTSLPSSPKQTQKPTTQNTKQKEAARDDKDDKDYFFKFIDDQVCKPLGSGFQDVFQCQSNLQEMQYRHKKQSKGLELKVDNTRA
Subjt:  MTHSKREKKTTSEVAKKTSLPSSPKQTQKPTTQNTKQKEAARDDKDDKDYFFKFIDDQVCKPLGSGFQDVFQCQSNLQEMQYRHKKQSKGLELKVDNTRA

A0A5D3E1H0 Uncharacterized protein2.1e-1756.99Show/hide
Query:  KREKKTTSEVAKKTSLPSSPKQTQKPTTQNTKQKEAARDDKDDKDYFFKFIDDQVCKPLGSGFQDVFQCQSNLQEMQYRHKKQSKGLELKVDN
        ++ K+  SE A KT  PS PKQ+ KPT Q+TKQKEA RDD DD +Y+FKFI++ V +PL  GF+DVFQCQ+NLQE Q +++K  + LELK D+
Subjt:  KREKKTTSEVAKKTSLPSSPKQTQKPTTQNTKQKEAARDDKDDKDYFFKFIDDQVCKPLGSGFQDVFQCQSNLQEMQYRHKKQSKGLELKVDN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCACTCCAAAAGGGAAAAGAAAACAACCTCCGAGGTAGCTAAAAAGACAAGCCTCCCTTCGTCGCCTAAGCAAACTCAAAAGCCCACAACACAGAACACCAAGCA
AAAGGAGGCGGCAAGGGATGACAAAGATGATAAGGACTATTTCTTCAAGTTCATTGATGATCAAGTTTGTAAACCACTAGGAAGTGGATTTCAAGATGTATTCCAATGTC
AATCCAACTTGCAAGAGATGCAATATCGACATAAGAAGCAGTCGAAAGGTTTAGAGCTCAAAGTTGACAATACTAGAGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTCACTCCAAAAGGGAAAAGAAAACAACCTCCGAGGTAGCTAAAAAGACAAGCCTCCCTTCGTCGCCTAAGCAAACTCAAAAGCCCACAACACAGAACACCAAGCA
AAAGGAGGCGGCAAGGGATGACAAAGATGATAAGGACTATTTCTTCAAGTTCATTGATGATCAAGTTTGTAAACCACTAGGAAGTGGATTTCAAGATGTATTCCAATGTC
AATCCAACTTGCAAGAGATGCAATATCGACATAAGAAGCAGTCGAAAGGTTTAGAGCTCAAAGTTGACAATACTAGAGCTTAA
Protein sequenceShow/hide protein sequence
MTHSKREKKTTSEVAKKTSLPSSPKQTQKPTTQNTKQKEAARDDKDDKDYFFKFIDDQVCKPLGSGFQDVFQCQSNLQEMQYRHKKQSKGLELKVDNTRA