CuGenDBv2

Gene ID	IVF0017722
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Armadillo-like helical
Genome location	chr12:18709292..18709567
RNA-Seq Expression	IVF0017722
Synteny	IVF0017722
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0060939.1 Armadillo-like helical [Cucumis melo var. makuwa]

2.15e-41

93.41

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Query:  MKGLAKESLMDFIMFVNGRMKMDEGANKRIKILYHAARMISKQMEATWLFATSRLKKLASTTTTQVKKAEDSSNNSSERNGNIMIRTTMTI
        MKGLAKESLMD IMFVNG MKMDEGANKRIKI YHAARMISKQMEATWLFAT+RLKK+ASTTT QVKKAEDSSNNSSERNGNIMIRTTMTI
Subjt:  MKGLAKESLMDFIMFVNGRMKMDEGANKRIKILYHAARMISKQMEATWLFATSRLKKLASTTTTQVKKAEDSSNNSSERNGNIMIRTTMTI

TYK05541.1 Armadillo-like helical [Cucumis melo var. makuwa]

8.47e-53

100

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Query:  MKGLAKESLMDFIMFVNGRMKMDEGANKRIKILYHAARMISKQMEATWLFATSRLKKLASTTTTQVKKAEDSSNNSSERNGNIMIRTTMTI
        MKGLAKESLMDFIMFVNGRMKMDEGANKRIKILYHAARMISKQMEATWLFATSRLKKLASTTTTQVKKAEDSSNNSSERNGNIMIRTTMTI
Subjt:  MKGLAKESLMDFIMFVNGRMKMDEGANKRIKILYHAARMISKQMEATWLFATSRLKKLASTTTTQVKKAEDSSNNSSERNGNIMIRTTMTI

XP_004143023.2 uncharacterized protein LOC101221149 [Cucumis sativus]

6.85e-41

93.41

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Query:  MKGLAKESLMDFIMFVNGRMKMDEGANKRIKILYHAARMISKQMEATWLFATSRLKKLASTTTTQVKKAEDSSNNSSERNGNIMIRTTMTI
        MKGLAKESLMD IMFVNG MKMDEGANKRIKI YHAARMISKQMEATWLFAT+RLKKLASTTT QVKKAEDSSNNSSERNGN MIRTTMTI
Subjt:  MKGLAKESLMDFIMFVNGRMKMDEGANKRIKILYHAARMISKQMEATWLFATSRLKKLASTTTTQVKKAEDSSNNSSERNGNIMIRTTMTI

XP_008444580.1 PREDICTED: uncharacterized protein LOC103487852 [Cucumis melo]

2.56e-41

93.41

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Query:  MKGLAKESLMDFIMFVNGRMKMDEGANKRIKILYHAARMISKQMEATWLFATSRLKKLASTTTTQVKKAEDSSNNSSERNGNIMIRTTMTI
        MKGLAKESLMD IMFVNG MKMDEGANKRIKI YHAARMISKQMEATWLFAT+RLKK+ASTTT QVKKAEDSSNNSSERNGNIMIRTTMTI
Subjt:  MKGLAKESLMDFIMFVNGRMKMDEGANKRIKILYHAARMISKQMEATWLFATSRLKKLASTTTTQVKKAEDSSNNSSERNGNIMIRTTMTI

XP_038886260.1 uncharacterized protein LOC120076487 [Benincasa hispida]

8.15e-35

87.78

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Query:  MKGLAKESLMDFIMFVNGRMKMDEGANKRIKILYHAARMISKQMEATWLFATSRLKKLASTTTTQVKKAEDSSNNSSERNGNIMIRTTMT
        MKGLAKESLMD IMFVNG MKM+E ANKRIKI YHAARMISKQMEATWLFAT+RLKKL STTT QVKKAEDSS NSSE NGNI IRTTMT
Subjt:  MKGLAKESLMDFIMFVNGRMKMDEGANKRIKILYHAARMISKQMEATWLFATSRLKKLASTTTTQVKKAEDSSNNSSERNGNIMIRTTMT

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LL28 Uncharacterized protein

3.7e-34

93.41

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Query:  MKGLAKESLMDFIMFVNGRMKMDEGANKRIKILYHAARMISKQMEATWLFATSRLKKLASTTTTQVKKAEDSSNNSSERNGNIMIRTTMTI
        MKGLAKESLMD IMFVNG MKMDEGANKRIKI YHAARMISKQMEATWLFAT+RLKKLAS TTTQVKKAEDSSNNSSERNGN MIRTTMTI
Subjt:  MKGLAKESLMDFIMFVNGRMKMDEGANKRIKILYHAARMISKQMEATWLFATSRLKKLASTTTTQVKKAEDSSNNSSERNGNIMIRTTMTI

A0A1S3BA59 uncharacterized protein LOC103487852

1.7e-34

93.41

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Query:  MKGLAKESLMDFIMFVNGRMKMDEGANKRIKILYHAARMISKQMEATWLFATSRLKKLASTTTTQVKKAEDSSNNSSERNGNIMIRTTMTI
        MKGLAKESLMD IMFVNG MKMDEGANKRIKI YHAARMISKQMEATWLFAT+RLKK+AS TTTQVKKAEDSSNNSSERNGNIMIRTTMTI
Subjt:  MKGLAKESLMDFIMFVNGRMKMDEGANKRIKILYHAARMISKQMEATWLFATSRLKKLASTTTTQVKKAEDSSNNSSERNGNIMIRTTMTI

A0A5A7V5F7 Armadillo-like helical

1.7e-34

93.41

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Query:  MKGLAKESLMDFIMFVNGRMKMDEGANKRIKILYHAARMISKQMEATWLFATSRLKKLASTTTTQVKKAEDSSNNSSERNGNIMIRTTMTI
        MKGLAKESLMD IMFVNG MKMDEGANKRIKI YHAARMISKQMEATWLFAT+RLKK+AS TTTQVKKAEDSSNNSSERNGNIMIRTTMTI
Subjt:  MKGLAKESLMDFIMFVNGRMKMDEGANKRIKILYHAARMISKQMEATWLFATSRLKKLASTTTTQVKKAEDSSNNSSERNGNIMIRTTMTI

A0A5D3C0T4 Armadillo-like helical

1.3e-39

100

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Query:  MKGLAKESLMDFIMFVNGRMKMDEGANKRIKILYHAARMISKQMEATWLFATSRLKKLASTTTTQVKKAEDSSNNSSERNGNIMIRTTMTI
        MKGLAKESLMDFIMFVNGRMKMDEGANKRIKILYHAARMISKQMEATWLFATSRLKKLASTTTTQVKKAEDSSNNSSERNGNIMIRTTMTI
Subjt:  MKGLAKESLMDFIMFVNGRMKMDEGANKRIKILYHAARMISKQMEATWLFATSRLKKLASTTTTQVKKAEDSSNNSSERNGNIMIRTTMTI

A0A6J1BPK8 uncharacterized protein LOC111004666

4.7e-21

72.53

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Query:  MKGLAKESLMDFIMFVNGRMKMDEGANKRIKILYHAARMISKQMEATWLFATSRLKKLASTTTTQVKKAEDSSNNSSERNGNIMIRTTMTI
        MKGLAKESLMD IMFVNG MKM E  +KRIKI YHAARMISKQM+ TWLFA++RLKKLAS    +V+KAEDSSNNS ER+G  M+  TMT+
Subjt:  MKGLAKESLMDFIMFVNGRMKMDEGANKRIKILYHAARMISKQMEATWLFATSRLKKLASTTTTQVKKAEDSSNNSSERNGNIMIRTTMTI

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G10200.1 ARM-repeat/Tetratricopeptide repeat (TPR)-like protein

8.0e-05

41.38

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Query:  MKGLAKESLMDFIMFVNGRMKMDEG--ANKRIKILYHAARMISKQMEATWLFATSRLK
        M GLAKESL+D I+F+N   + ++   + ++ K+  +A R++ KQM A WLF  + LK
Subjt:  MKGLAKESLMDFIMFVNGRMKMDEG--ANKRIKILYHAARMISKQMEATWLFATSRLK

AT5G43120.1 ARM-repeat/Tetratricopeptide repeat (TPR)-like protein

1.1e-09

60.34

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Query:  MKGLAKESLMDFIMFVNGRMKMDEGANKRIKILYHAARMISKQMEATWLFATSRLKKL
        +KGL++ESLMD IMFVNGR         R  I Y+AA+MISKQMEATWLF  +R  KL
Subjt:  MKGLAKESLMDFIMFVNGRMKMDEGANKRIKILYHAARMISKQMEATWLFATSRLKKL

Sequences

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CDS sequence

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ATGAAAGGATTGGCAAAAGAGAGCTTAATGGATTTCATCATGTTTGTGAATGGTAGAATGAAGATGGATGAGGGTGCAAATAAGAGAATCAAGATTCTATATCATGCAGC
AAGAATGATTAGCAAACAGATGGAAGCAACATGGCTTTTTGCAACATCTAGATTAAAGAAATTGGCTTCAACGACAACAACTCAAGTGAAAAAAGCTGAAGATTCTTCTA
ACAACAGCAGTGAGAGGAATGGAAACATCATGATCAGAACAACCATGACTATATAA

mRNA sequence

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Protein sequence

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MKGLAKESLMDFIMFVNGRMKMDEGANKRIKILYHAARMISKQMEATWLFATSRLKKLASTTTTQVKKAEDSSNNSSERNGNIMIRTTMTI

IVF0017722 (gene) of Melon (IVF77) v1 genome