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IVF0017787 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0017787
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionZf-CCHC domain-containing protein
Genome locationchr07:17741991..17742254
RNA-Seq ExpressionIVF0017787
SyntenyIVF0017787
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0000166 - nucleotide binding (molecular function)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0016301 - kinase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057344.1 RNA-directed DNA polymerase-like protein [Cucumis melo var. makuwa]2.38e-2876.14Show/hide
Query:  MASRRGNNPTARDNREQEEVEEIATLSPRTSTVRLLAVEDSLGDLHGKTNRMMDYLEALTRRMDKLPAPARIEAYA---RNDGNRGGR
        MA RRG  P A DNREQEEVE IATLSPRTSTVRLLAV+D LGDLH K NRMMD LE LT+RMD LPAPARIEA     RN+ NRGGR
Subjt:  MASRRGNNPTARDNREQEEVEEIATLSPRTSTVRLLAVEDSLGDLHGKTNRMMDYLEALTRRMDKLPAPARIEAYA---RNDGNRGGR

KAA0062943.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa]1.49e-3087.5Show/hide
Query:  EQEEVEEIATLSPRTSTVRLLAVEDSLGDLHGKTNRMMDYLEALTRRMDKLPAPARIEAYARNDGNRGGRWV
        EQEEVEEIATLS RTSTVRLLAVEDSLGDLHGK +RMMDYL+ALTRRM++LPAPARI+AYAR DGNRG RWV
Subjt:  EQEEVEEIATLSPRTSTVRLLAVEDSLGDLHGKTNRMMDYLEALTRRMDKLPAPARIEAYARNDGNRGGRWV

KAA0063032.1 zf-CCHC domain-containing protein [Cucumis melo var. makuwa]1.98e-49100Show/hide
Query:  MASRRGNNPTARDNREQEEVEEIATLSPRTSTVRLLAVEDSLGDLHGKTNRMMDYLEALTRRMDKLPAPARIEAYARNDGNRGGRW
        MASRRGNNPTARDNREQEEVEEIATLSPRTSTVRLLAVEDSLGDLHGKTNRMMDYLEALTRRMDKLPAPARIEAYARNDGNRGGRW
Subjt:  MASRRGNNPTARDNREQEEVEEIATLSPRTSTVRLLAVEDSLGDLHGKTNRMMDYLEALTRRMDKLPAPARIEAYARNDGNRGGRW

TYK11219.1 DExH-box ATP-dependent RNA helicase DExH7 [Cucumis melo var. makuwa]1.01e-2775.29Show/hide
Query:  MASRRGNNPTARDNREQEEVEEIATLSPRTSTVRLLAVEDSLGDLHGKTNRMMDYLEALTRRMDKLPAPARIEAYARNDGNRGGR
        M  RRG  P   DNREQEEVEEI TLSPRTSTV LLAVEDSLGDLH K +R+MD LE LTRRMD LPA ARIEA  R D NRGGR
Subjt:  MASRRGNNPTARDNREQEEVEEIATLSPRTSTVRLLAVEDSLGDLHGKTNRMMDYLEALTRRMDKLPAPARIEAYARNDGNRGGR

TYK16316.1 zf-CCHC domain-containing protein [Cucumis melo var. makuwa]7.84e-4998.84Show/hide
Query:  MASRRGNNPTARDNREQEEVEEIATLSPRTSTVRLLAVEDSLGDLHGKTNRMMDYLEALTRRMDKLPAPARIEAYARNDGNRGGRW
        MASRRGNNPTARDNREQEEVEEIATLSPRTSTVRLLAVEDSLGDLHGKTNRMMDYLEALTRRMDKLPAPARI+AYARNDGNRGGRW
Subjt:  MASRRGNNPTARDNREQEEVEEIATLSPRTSTVRLLAVEDSLGDLHGKTNRMMDYLEALTRRMDKLPAPARIEAYARNDGNRGGRW

TrEMBL top hitse value%identityAlignment
A0A5A7UQ86 RNA-directed DNA polymerase-like protein7.5e-2476.14Show/hide
Query:  MASRRGNNPTARDNREQEEVEEIATLSPRTSTVRLLAVEDSLGDLHGKTNRMMDYLEALTRRMDKLPAPARIEA---YARNDGNRGGR
        MA RRG  P A DNREQEEVE IATLSPRTSTVRLLAV+D LGDLH K NRMMD LE LT+RMD LPAPARIEA     RN+ NRGGR
Subjt:  MASRRGNNPTARDNREQEEVEEIATLSPRTSTVRLLAVEDSLGDLHGKTNRMMDYLEALTRRMDKLPAPARIEA---YARNDGNRGGR

A0A5A7V462 Zf-CCHC domain-containing protein9.7e-40100Show/hide
Query:  MASRRGNNPTARDNREQEEVEEIATLSPRTSTVRLLAVEDSLGDLHGKTNRMMDYLEALTRRMDKLPAPARIEAYARNDGNRGGRW
        MASRRGNNPTARDNREQEEVEEIATLSPRTSTVRLLAVEDSLGDLHGKTNRMMDYLEALTRRMDKLPAPARIEAYARNDGNRGGRW
Subjt:  MASRRGNNPTARDNREQEEVEEIATLSPRTSTVRLLAVEDSLGDLHGKTNRMMDYLEALTRRMDKLPAPARIEAYARNDGNRGGRW

A0A5A7V4G7 Retrovirus-related Pol polyprotein from transposon 17.61.0e-2587.5Show/hide
Query:  EQEEVEEIATLSPRTSTVRLLAVEDSLGDLHGKTNRMMDYLEALTRRMDKLPAPARIEAYARNDGNRGGRWV
        EQEEVEEIATLS RTSTVRLLAVEDSLGDLHGK +RMMDYL+ALTRRM++LPAPARI+AYAR DGNRG RWV
Subjt:  EQEEVEEIATLSPRTSTVRLLAVEDSLGDLHGKTNRMMDYLEALTRRMDKLPAPARIEAYARNDGNRGGRWV

A0A5D3CLX2 DExH-box ATP-dependent RNA helicase DExH71.1e-2275.29Show/hide
Query:  MASRRGNNPTARDNREQEEVEEIATLSPRTSTVRLLAVEDSLGDLHGKTNRMMDYLEALTRRMDKLPAPARIEAYARNDGNRGGR
        M  RRG  P   DNREQEEVEEI TLSPRTSTV LLAVEDSLGDLH K +R+MD LE LTRRMD LPA ARIEA  R D NRGGR
Subjt:  MASRRGNNPTARDNREQEEVEEIATLSPRTSTVRLLAVEDSLGDLHGKTNRMMDYLEALTRRMDKLPAPARIEAYARNDGNRGGR

A0A5D3D0X3 Zf-CCHC domain-containing protein2.8e-3998.84Show/hide
Query:  MASRRGNNPTARDNREQEEVEEIATLSPRTSTVRLLAVEDSLGDLHGKTNRMMDYLEALTRRMDKLPAPARIEAYARNDGNRGGRW
        MASRRGNNPTARDNREQEEVEEIATLSPRTSTVRLLAVEDSLGDLHGKTNRMMDYLEALTRRMDKLPAPARI+AYARNDGNRGGRW
Subjt:  MASRRGNNPTARDNREQEEVEEIATLSPRTSTVRLLAVEDSLGDLHGKTNRMMDYLEALTRRMDKLPAPARIEAYARNDGNRGGRW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAGCCGGAGAGGAAACAACCCAACCGCGAGGGATAACCGCGAGCAAGAAGAGGTGGAGGAAATTGCCACCCTCTCTCCAAGGACATCTACGGTACGCTTGTTGGC
CGTTGAAGACTCCCTGGGAGATTTGCACGGAAAGACCAATAGAATGATGGATTACCTGGAAGCGCTGACCCGAAGGATGGATAAACTACCAGCCCCAGCAAGGATTGAAG
CCTATGCTCGAAATGATGGAAATAGAGGGGGTCGATGGGTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTAGCCGGAGAGGAAACAACCCAACCGCGAGGGATAACCGCGAGCAAGAAGAGGTGGAGGAAATTGCCACCCTCTCTCCAAGGACATCTACGGTACGCTTGTTGGC
CGTTGAAGACTCCCTGGGAGATTTGCACGGAAAGACCAATAGAATGATGGATTACCTGGAAGCGCTGACCCGAAGGATGGATAAACTACCAGCCCCAGCAAGGATTGAAG
CCTATGCTCGAAATGATGGAAATAGAGGGGGTCGATGGGTATGA
Protein sequenceShow/hide protein sequence
MASRRGNNPTARDNREQEEVEEIATLSPRTSTVRLLAVEDSLGDLHGKTNRMMDYLEALTRRMDKLPAPARIEAYARNDGNRGGRWV