CuGenDBv2

Gene ID	IVF0017801
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Rab5-interacting
Genome location	chr12:1782464..1784665
RNA-Seq Expression	IVF0017801
Synteny	IVF0017801
Gene Ontology terms	GO:0006996 - organelle organization (biological process) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR010742 - Rab5-interacting protein IPR029008 - Rab5-interacting protein family

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004145291.1 uncharacterized protein RAB5IF homolog [Cucumis sativus]

1.50e-83

96.06

Show/hide

Query:  MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG
        MKDGK+MKVNSQLQ QNGHLPPFKLA+LFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGG+WFILFLVISTTMIYGYYAMILKVDEEEFGGHG
Subjt:  MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASVTLFLLMWTLIYSLGHF
        VLLQEGLFAS+TLFLLMWTLIYSLGHF
Subjt:  VLLQEGLFASVTLFLLMWTLIYSLGHF

XP_008457469.1 PREDICTED: uncharacterized protein C20orf24 homolog [Cucumis melo]

5.84e-88

100

Show/hide

Query:  MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG
        MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG
Subjt:  MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASVTLFLLMWTLIYSLGHF
        VLLQEGLFASVTLFLLMWTLIYSLGHF
Subjt:  VLLQEGLFASVTLFLLMWTLIYSLGHF

XP_022948613.1 uncharacterized protein C20orf24 homolog [Cucurbita moschata]

1.33e-84

93.7

Show/hide

Query:  MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG
        MKDGK++KVNSQLQHQNGHLPPFKLA LFDPE SWDKDQLGDVLHWMRQSVALVCGLLWGS+PLVGGIWFILFLVISTTM+YGYYAMILKVDEEEFGGHG
Subjt:  MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASVTLFLLMWTLIYSLGHF
        VLLQEGLFAS+TLFLLMWTL+YSLGHF
Subjt:  VLLQEGLFASVTLFLLMWTLIYSLGHF

XP_022998338.1 uncharacterized protein C20orf24 homolog [Cucurbita maxima]

3.81e-84

92.91

Show/hide

Query:  MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG
        MKDGK++KVNSQLQHQNGHLPPFKLA LFDPE SWDKDQLGDVLHWMRQSVALVCGLLWGS+PLVGGIWFI+FLVISTTM+YGYYAMILKVDEEEFGGHG
Subjt:  MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASVTLFLLMWTLIYSLGHF
        VLLQEGLFAS+TLFLLMWTL+YSLGHF
Subjt:  VLLQEGLFASVTLFLLMWTLIYSLGHF

XP_038895585.1 respirasome Complex Assembly Factor 1-like isoform X2 [Benincasa hispida]

1.14e-85

96.06

Show/hide

Query:  MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG
        MKDGK+ KVNSQLQHQNGHLPPFKLA+LFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTM+YGYYAMILKVDEEEFGGHG
Subjt:  MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASVTLFLLMWTLIYSLGHF
        VLLQEGLFAS+TLFLLMWTLIYSLGHF
Subjt:  VLLQEGLFASVTLFLLMWTLIYSLGHF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LY22 Uncharacterized protein

1.4e-63

96.06

Show/hide

Query:  MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG
        MKDGK+MKVNSQLQ QNGHLPPFKLA+LFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGG+WFILFLVISTTMIYGYYAMILKVDEEEFGGHG
Subjt:  MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASVTLFLLMWTLIYSLGHF
        VLLQEGLFAS+TLFLLMWTLIYSLGHF
Subjt:  VLLQEGLFASVTLFLLMWTLIYSLGHF

A0A1S3C692 uncharacterized protein C20orf24 homolog

6.1e-67

100

Show/hide

Query:  MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG
        MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG
Subjt:  MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASVTLFLLMWTLIYSLGHF
        VLLQEGLFASVTLFLLMWTLIYSLGHF
Subjt:  VLLQEGLFASVTLFLLMWTLIYSLGHF

A0A5A7VQ84 Rab5-interacting

9.5e-60

93.7

Show/hide

Query:  MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG
        MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG
Subjt:  MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASVTLFLLMWTLIYSLGHF
        VLLQEGLFASVTLFLL   L   L  F
Subjt:  VLLQEGLFASVTLFLLMWTLIYSLGHF

A0A6J1G9S8 uncharacterized protein C20orf24 homolog

2.2e-64

93.7

Show/hide

Query:  MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG
        MKDGK++KVNSQLQHQNGHLPPFKLA LFDPE SWDKDQLGDVLHWMRQSVALVCGLLWGS+PLVGGIWFILFLVISTTM+YGYYAMILKVDEEEFGGHG
Subjt:  MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASVTLFLLMWTLIYSLGHF
        VLLQEGLFAS+TLFLLMWTL+YSLGHF
Subjt:  VLLQEGLFASVTLFLLMWTLIYSLGHF

A0A6J1KGG2 uncharacterized protein C20orf24 homolog

4.8e-64

92.91

Show/hide

Query:  MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG
        MKDGK++KVNSQLQHQNGHLPPFKLA LFDPE SWDKDQLGDVLHWMRQSVALVCGLLWGS+PLVGGIWFI+FLVISTTM+YGYYAMILKVDEEEFGGHG
Subjt:  MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASVTLFLLMWTLIYSLGHF
        VLLQEGLFAS+TLFLLMWTL+YSLGHF
Subjt:  VLLQEGLFASVTLFLLMWTLIYSLGHF

SwissProt top hits

e value

%identity

Alignment

Q9BUV8 Respirasome Complex Assembly Factor 1

8.9e-15

33.86

Show/hide

Query:  MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSW-DKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGH
        M  G+  +   Q Q  NG L     +++   + +W DKD+  DV++W RQ +A+V G++WG +PL G +    F +I+  ++Y Y++  L++DEEE+GG 
Subjt:  MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSW-DKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGH

Query:  GVLLQEGLFASVTLFLLMWTLIYSLGH
          L +EG   S  LF++     ++ GH
Subjt:  GVLLQEGLFASVTLFLLMWTLIYSLGH

Q9CQT9 Respirasome Complex Assembly Factor 1

3.3e-17

35.16

Show/hide

Query:  MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSW-DKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGH
        M  G+  +   Q Q  NG L     +++   + +W DKD+  DV++W RQ +ALV G++WG +PL G +    F +I+  ++Y Y++  L++DEEE+GG 
Subjt:  MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSW-DKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGH

Query:  GVLLQEGLFASVTLFLLMWTLIYSLGHF
          L +EG   S  LF+++W + Y+  H+
Subjt:  GVLLQEGLFASVTLFLLMWTLIYSLGHF

Arabidopsis top hits

e value

%identity

Alignment

AT2G29020.1 Rab5-interacting family protein

3.1e-47

64.66

Show/hide

Query:  MKDGKTMKVNS------QLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEE
        MK+GK+ K +S      Q+ HQN HL  F  A+LFD E SWDKDQLGDVLHW+RQ V L+CGLLWG+IPLVGGIW +LFL IS+ ++YGYYA++LK+DEE
Subjt:  MKDGKTMKVNS------QLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEE

Query:  EFGGHGVLLQEGLFASVTLFLLMWTLIYSLGHF
        +FGGH  LLQ+GLFAS++LFLL W L+YSL  F
Subjt:  EFGGHGVLLQEGLFASVTLFLLMWTLIYSLGHF

AT5G59410.1 Rab5-interacting family protein

1.0e-50

72.31

Show/hide

Query:  MKDGKTMKVN---SQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFG
        MK+ K+ K+N    Q  HQN HL P KLA+LFDP+ SWDKDQLGDVLHW+RQ V L+ GLLWGSIPLVGGIW ILFL IS+ ++YGYYAMILKVDEE+FG
Subjt:  MKDGKTMKVN---SQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFG

Query:  GHGVLLQEGLFASVTLFLLMWTLIYSLGHF
        GH  LLQEGLFAS+TLFLL W L+YSL HF
Subjt:  GHGVLLQEGLFASVTLFLLMWTLIYSLGHF

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAAGGACGGGAAAACTATGAAGGTCAATTCTCAGTTGCAGCATCAGAATGGTCACTTGCCACCCTTCAAATTGGCTAGATTGTTCGATCCAGAGACTTCATGGGATAA
GGATCAACTAGGAGATGTGTTGCATTGGATGAGACAGTCGGTTGCTCTTGTATGTGGGCTGCTTTGGGGCTCCATACCTCTGGTTGGAGGAATTTGGTTCATCTTATTCT
TGGTGATATCAACCACGATGATATATGGATATTATGCAATGATATTGAAGGTAGATGAAGAAGAATTCGGTGGTCATGGAGTTCTCCTCCAGGAAGGGCTGTTTGCTTCC
GTAACTCTGTTTCTGCTTATGTGGACCCTCATTTATAGCTTGGGACACTTCTGA

mRNA sequence

Show/hide mRNA sequence

AGGTTTTAGAGAGAGATTTTGGTGACCCAATAATTTTCATTTAAAAAAAAAAAAAAGAACACTACAATTTCCCACTTCAGATTGAATCCAAATTTCACGAATTTTTTTTT
AGAAATTTTGAATGGAGAGAGATTTACAGAAAGCCTTCTTCTGAATTTGTTTATTCGATTTCCCTCAATTTCATGGCGTTCTTGTTTTTTCCAAAACCCTAGTAATCAGT
AGCATCTCCCATCTTCCCTCTCCATACTCTTCACTGGGTATCTCGAATTTTCCCCCAATTTTTCGATTTCGGAGCAGTCAGCATGAAGGACGGGAAAACTATGAAGGTCA
ATTCTCAGTTGCAGCATCAGAATGGTCACTTGCCACCCTTCAAATTGGCTAGATTGTTCGATCCAGAGACTTCATGGGATAAGGATCAACTAGGAGATGTGTTGCATTGG
ATGAGACAGTCGGTTGCTCTTGTATGTGGGCTGCTTTGGGGCTCCATACCTCTGGTTGGAGGAATTTGGTTCATCTTATTCTTGGTGATATCAACCACGATGATATATGG
ATATTATGCAATGATATTGAAGGTAGATGAAGAAGAATTCGGTGGTCATGGAGTTCTCCTCCAGGAAGGGCTGTTTGCTTCCGTAACTCTGTTTCTGCTTATGTGGACCC
TCATTTATAGCTTGGGACACTTCTGACAATGGTTTTGTCAACGTTCTCGAAATCGGCCAAAGCATCAGTGGAGAGGTTGGTCGCCATTGTTGCTTGCTCTTTTATTAGTG
AATGTGCAGTACCTTACTGTTAAGGAGTGAAAACGCTTTTAGAAGTGGATTAATTTCATTAGGATTACAATTAACCAAAGTTTAGAAATTATTTACTCTGTTAGATCCAA
TCCAATCTTAAATCAATAAAATCTTTACCGAAATGTCG

Protein sequence

Show/hide protein sequence

MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHGVLLQEGLFAS
VTLFLLMWTLIYSLGHF

IVF0017801 (gene) of Melon (IVF77) v1 genome