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IVF0017808 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0017808
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPolyubiquitin-like
Genome locationchr06:20932725..20933171
RNA-Seq ExpressionIVF0017808
SyntenyIVF0017808
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:1902255 - positive regulation of intrinsic apoptotic signaling pathway by p53 class mediator (biological process)
GO:1901214 - regulation of neuron death (biological process)
GO:0008406 - gonad development (biological process)
GO:0061136 - regulation of proteasomal protein catabolic process (biological process)
GO:0051881 - regulation of mitochondrial membrane potential (biological process)
GO:0047497 - mitochondrion transport along microtubule (biological process)
GO:0031398 - positive regulation of protein ubiquitination (biological process)
GO:0005634 - nucleus (cellular component)
GO:0043025 - neuronal cell body (cellular component)
GO:0031315 - extrinsic component of mitochondrial outer membrane (cellular component)
GO:0030666 - endocytic vesicle membrane (cellular component)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0010008 - endosome membrane (cellular component)
GO:0005886 - plasma membrane (cellular component)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0031386 - protein tag (molecular function)
GO:0031625 - ubiquitin protein ligase binding (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR019956 - Ubiquitin domain
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025481.1 polyubiquitin-like [Cucumis melo var. makuwa]9.99e-6568.92Show/hide
Query:  MATDQYTSLTNNGDMSIKLAAIEAVQALPDIHEDLLFEAFDFLEKRKHAKMFMAINENLRSKWLRRKLWQEPSEIFVIAMDGNMISLSVSTFITIDELKV
        MATDQYT L NNGDM IKLAAIEAVQAL DI EDL FEAFDFLEK+ +AKMF+A+N NLRS+WLRRKLW    +I +  + G  I + VS FITI+ELKV
Subjt:  MATDQYTSLTNNGDMSIKLAAIEAVQALPDIHEDLLFEAFDFLEKRKHAKMFMAINENLRSKWLRRKLWQEPSEIFVIAMDGNMISLSVSTFITIDELKV

Query:  KLYEKKGYFPTKVTLIYAGKLLEDGRSLSDYNIRDGCAIHAVLRLCGC
        KLYEK+ Y PTKV  I AGK LE+GRSLSDYNI DG  IH + R+CGC
Subjt:  KLYEKKGYFPTKVTLIYAGKLLEDGRSLSDYNIRDGCAIHAVLRLCGC

KAA0025486.1 polyubiquitin-like [Cucumis melo var. makuwa]6.43e-102100Show/hide
Query:  MATDQYTSLTNNGDMSIKLAAIEAVQALPDIHEDLLFEAFDFLEKRKHAKMFMAINENLRSKWLRRKLWQEPSEIFVIAMDGNMISLSVSTFITIDELKV
        MATDQYTSLTNNGDMSIKLAAIEAVQALPDIHEDLLFEAFDFLEKRKHAKMFMAINENLRSKWLRRKLWQEPSEIFVIAMDGNMISLSVSTFITIDELKV
Subjt:  MATDQYTSLTNNGDMSIKLAAIEAVQALPDIHEDLLFEAFDFLEKRKHAKMFMAINENLRSKWLRRKLWQEPSEIFVIAMDGNMISLSVSTFITIDELKV

Query:  KLYEKKGYFPTKVTLIYAGKLLEDGRSLSDYNIRDGCAIHAVLRLCGC
        KLYEKKGYFPTKVTLIYAGKLLEDGRSLSDYNIRDGCAIHAVLRLCGC
Subjt:  KLYEKKGYFPTKVTLIYAGKLLEDGRSLSDYNIRDGCAIHAVLRLCGC

XP_008463442.1 PREDICTED: polyubiquitin-like [Cucumis melo]3.59e-2337.67Show/hide
Query:  LTNNGDMSIKLA------AIEAVQALPDIHEDLLFEAFDFL-EKRKHAKMFMAINENLRSKWLRRKLWQEPS-EIFVIAMDGNMISLSVSTFITIDELKV
        + +N D+SI  +       I+AV+ALPD+ EDL+ +AFDFL +    AK+F++++  LR KWL +KL  +P  +IFV  ++G  +SL V T  TI+++K 
Subjt:  LTNNGDMSIKLA------AIEAVQALPDIHEDLLFEAFDFL-EKRKHAKMFMAINENLRSKWLRRKLWQEPS-EIFVIAMDGNMISLSVSTFITIDELKV

Query:  KLYEKKGYFPTKVTLIYAGKLLEDGRSLSDYNIRDGCAIHAVLRLC
        K+  K+GY   +  L++ G  L+D R+L    +  G ++H +L +C
Subjt:  KLYEKKGYFPTKVTLIYAGKLLEDGRSLSDYNIRDGCAIHAVLRLC

XP_022154970.1 ubiquitin-like isoform X1 [Momordica charantia]1.52e-2943.17Show/hide
Query:  NNGDMSIKLAAIEAVQALPDIHEDLLFEAFDFLEKRKHAKMFMAINENLRSKWLRRKLWQEPS-EIFVIAMDGNMISLSVSTFITIDELKVKLYEKKGYF
        ++G +SI  A I+AVQALPD+ EDL+ +A DF +  ++ ++FMA++  LR +WL R L +    +I V  + G  +   +    TID +K K+   +GY 
Subjt:  NNGDMSIKLAAIEAVQALPDIHEDLLFEAFDFLEKRKHAKMFMAINENLRSKWLRRKLWQEPS-EIFVIAMDGNMISLSVSTFITIDELKVKLYEKKGYF

Query:  PTKVTLIYAGKLLEDGRSLSDYNIRDGCAIHAVLRLCGC
        P +  LIY G+ LEDGR+L++YNIR G  +H V RLCGC
Subjt:  PTKVTLIYAGKLLEDGRSLSDYNIRDGCAIHAVLRLCGC

XP_022154972.1 ubiquitin-like isoform X2 [Momordica charantia]5.05e-3043.48Show/hide
Query:  NNGDMSIKLAAIEAVQALPDIHEDLLFEAFDFLEKRKHAKMFMAINENLRSKWLRRKLWQEPSEIFVIAMDGNMISLSVSTFITIDELKVKLYEKKGYFP
        ++G +SI  A I+AVQALPD+ EDL+ +A DF +  ++ ++FMA++  LR +WL R L     +I V  + G  +   +    TID +K K+   +GY P
Subjt:  NNGDMSIKLAAIEAVQALPDIHEDLLFEAFDFLEKRKHAKMFMAINENLRSKWLRRKLWQEPSEIFVIAMDGNMISLSVSTFITIDELKVKLYEKKGYFP

Query:  TKVTLIYAGKLLEDGRSLSDYNIRDGCAIHAVLRLCGC
         +  LIY G+ LEDGR+L++YNIR G  +H V RLCGC
Subjt:  TKVTLIYAGKLLEDGRSLSDYNIRDGCAIHAVLRLCGC

TrEMBL top hitse value%identityAlignment
A0A0A0L2G3 Ubiquitin-like domain-containing protein5.9e-2967Show/hide
Query:  MFMAINENLRSKWLRRKLWQEPSEIFVIAMDGNMISLSVSTFITIDELKVKLYEKKGYFPTKVTLIYAGKLLEDGR--SLSDYNIRDGCAIHAVLRLCGC
        MF+A+N NLRS+WLRRKLW EP+EIFV   +GN I++ VS FI  D LKVKLYEK+GY P+ +  IYAGK+LEDGR  SLSDYNI DG  I A LRLCGC
Subjt:  MFMAINENLRSKWLRRKLWQEPSEIFVIAMDGNMISLSVSTFITIDELKVKLYEKKGYFPTKVTLIYAGKLLEDGR--SLSDYNIRDGCAIHAVLRLCGC

A0A5A7SML9 Polyubiquitin-like3.9e-4968.92Show/hide
Query:  MATDQYTSLTNNGDMSIKLAAIEAVQALPDIHEDLLFEAFDFLEKRKHAKMFMAINENLRSKWLRRKLWQEPSEIFVIAMDGNMISLSVSTFITIDELKV
        MATDQYT L NNGDM IKLAAIEAVQAL DI EDL FEAFDFLEK+ +AKMF+A+N NLRS+WLRRKLW    +I +  + G  I + VS FITI+ELKV
Subjt:  MATDQYTSLTNNGDMSIKLAAIEAVQALPDIHEDLLFEAFDFLEKRKHAKMFMAINENLRSKWLRRKLWQEPSEIFVIAMDGNMISLSVSTFITIDELKV

Query:  KLYEKKGYFPTKVTLIYAGKLLEDGRSLSDYNIRDGCAIHAVLRLCGC
        KLYEK+ Y PTKV  I AGK LE+GRSLSDYNI DG  IH + R+CGC
Subjt:  KLYEKKGYFPTKVTLIYAGKLLEDGRSLSDYNIRDGCAIHAVLRLCGC

A0A5D3BQI8 Polyubiquitin-like2.0e-77100Show/hide
Query:  MATDQYTSLTNNGDMSIKLAAIEAVQALPDIHEDLLFEAFDFLEKRKHAKMFMAINENLRSKWLRRKLWQEPSEIFVIAMDGNMISLSVSTFITIDELKV
        MATDQYTSLTNNGDMSIKLAAIEAVQALPDIHEDLLFEAFDFLEKRKHAKMFMAINENLRSKWLRRKLWQEPSEIFVIAMDGNMISLSVSTFITIDELKV
Subjt:  MATDQYTSLTNNGDMSIKLAAIEAVQALPDIHEDLLFEAFDFLEKRKHAKMFMAINENLRSKWLRRKLWQEPSEIFVIAMDGNMISLSVSTFITIDELKV

Query:  KLYEKKGYFPTKVTLIYAGKLLEDGRSLSDYNIRDGCAIHAVLRLCGC
        KLYEKKGYFPTKVTLIYAGKLLEDGRSLSDYNIRDGCAIHAVLRLCGC
Subjt:  KLYEKKGYFPTKVTLIYAGKLLEDGRSLSDYNIRDGCAIHAVLRLCGC

A0A6J1DL46 ubiquitin-like isoform X12.4e-2243.17Show/hide
Query:  NNGDMSIKLAAIEAVQALPDIHEDLLFEAFDFLEKRKHAKMFMAINENLRSKWLRRKLWQE-PSEIFVIAMDGNMISLSVSTFITIDELKVKLYEKKGYF
        ++G +SI  A I+AVQALPD+ EDL+ +A DF +  ++ ++FMA++  LR +WL R L +    +I V  + G  +   +    TID +K K+   +GY 
Subjt:  NNGDMSIKLAAIEAVQALPDIHEDLLFEAFDFLEKRKHAKMFMAINENLRSKWLRRKLWQE-PSEIFVIAMDGNMISLSVSTFITIDELKVKLYEKKGYF

Query:  PTKVTLIYAGKLLEDGRSLSDYNIRDGCAIHAVLRLCGC
        P +  LIY G+ LEDGR+L++YNIR G  +H V RLCGC
Subjt:  PTKVTLIYAGKLLEDGRSLSDYNIRDGCAIHAVLRLCGC

A0A6J1DN50 ubiquitin-like isoform X21.1e-2243.48Show/hide
Query:  NNGDMSIKLAAIEAVQALPDIHEDLLFEAFDFLEKRKHAKMFMAINENLRSKWLRRKLWQEPSEIFVIAMDGNMISLSVSTFITIDELKVKLYEKKGYFP
        ++G +SI  A I+AVQALPD+ EDL+ +A DF +  ++ ++FMA++  LR +WL R L     +I V  + G  +   +    TID +K K+   +GY P
Subjt:  NNGDMSIKLAAIEAVQALPDIHEDLLFEAFDFLEKRKHAKMFMAINENLRSKWLRRKLWQEPSEIFVIAMDGNMISLSVSTFITIDELKVKLYEKKGYFP

Query:  TKVTLIYAGKLLEDGRSLSDYNIRDGCAIHAVLRLCGC
         +  LIY G+ LEDGR+L++YNIR G  +H V RLCGC
Subjt:  TKVTLIYAGKLLEDGRSLSDYNIRDGCAIHAVLRLCGC

SwissProt top hitse value%identityAlignment
P0CH06 Ubiquitin-60S ribosomal protein L402.8e-1250Show/hide
Query:  EIFVIAMDGNMISLSVSTFITIDELKVKLYEKKGYFPTKVTLIYAGKLLEDGRSLSDYNIRDGCAIHAVLRLCG
        +IFV  + G  I+L V +  TID +K K+ +K+G  P +  LI+AGK LEDGR+LSDYNI+    +H VLRL G
Subjt:  EIFVIAMDGNMISLSVSTFITIDELKVKLYEKKGYFPTKVTLIYAGKLLEDGRSLSDYNIRDGCAIHAVLRLCG

P0CH07 Ubiquitin-60S ribosomal protein L402.8e-1250Show/hide
Query:  EIFVIAMDGNMISLSVSTFITIDELKVKLYEKKGYFPTKVTLIYAGKLLEDGRSLSDYNIRDGCAIHAVLRLCG
        +IFV  + G  I+L V +  TID +K K+ +K+G  P +  LI+AGK LEDGR+LSDYNI+    +H VLRL G
Subjt:  EIFVIAMDGNMISLSVSTFITIDELKVKLYEKKGYFPTKVTLIYAGKLLEDGRSLSDYNIRDGCAIHAVLRLCG

P19848 Ubiquitin1.7e-1250Show/hide
Query:  EIFVIAMDGNMISLSVSTFITIDELKVKLYEKKGYFPTKVTLIYAGKLLEDGRSLSDYNIRDGCAIHAVLRLCG
        +IFV  + G  I+L V +  TID +K K+ +K+G  P +  LI+AGK LEDGR+LSDYNI+    +H VLRL G
Subjt:  EIFVIAMDGNMISLSVSTFITIDELKVKLYEKKGYFPTKVTLIYAGKLLEDGRSLSDYNIRDGCAIHAVLRLCG

Q39256 Polyubiquitin 85.2e-1450Show/hide
Query:  EIFVIAMDGNMISLSVSTFITIDELKVKLYEKKGYFPTKVTLIYAGKLLEDGRSLSDYNIRDGCAIHAVLRLCG
        +IFV  + G  I+L V +  TID +K K+ +K+G  P +  LI+AGK LEDGR+L+DYNI+    +H VLRLCG
Subjt:  EIFVIAMDGNMISLSVSTFITIDELKVKLYEKKGYFPTKVTLIYAGKLLEDGRSLSDYNIRDGCAIHAVLRLCG

Q3E7K8 Polyubiquitin 121.7e-1250Show/hide
Query:  EIFVIAMDGNMISLSVSTFITIDELKVKLYEKKGYFPTKVTLIYAGKLLEDGRSLSDYNIRDGCAIHAVLRLCG
        +IFV  + G  I+L V +  TID LK K+ +K+G  P +  LI+AGK LEDGR+L+DYNI+    +H VLRL G
Subjt:  EIFVIAMDGNMISLSVSTFITIDELKVKLYEKKGYFPTKVTLIYAGKLLEDGRSLSDYNIRDGCAIHAVLRLCG

Arabidopsis top hitse value%identityAlignment
AT1G23410.1 Ribosomal protein S27a / Ubiquitin family protein2.6e-1348.65Show/hide
Query:  EIFVIAMDGNMISLSVSTFITIDELKVKLYEKKGYFPTKVTLIYAGKLLEDGRSLSDYNIRDGCAIHAVLRLCG
        +IFV  + G  I+L V +  TID +K K+ +K+G  P +  LI+AGK LEDGR+L+DYNI+    +H VLRL G
Subjt:  EIFVIAMDGNMISLSVSTFITIDELKVKLYEKKGYFPTKVTLIYAGKLLEDGRSLSDYNIRDGCAIHAVLRLCG

AT1G31340.1 related to ubiquitin 12.6e-1348.65Show/hide
Query:  EIFVIAMDGNMISLSVSTFITIDELKVKLYEKKGYFPTKVTLIYAGKLLEDGRSLSDYNIRDGCAIHAVLRLCG
        +IFV  + G  I+L V +  TID +K K+ +K+G  P +  LI+AGK LEDGR+L+DYNI+    +H VLRL G
Subjt:  EIFVIAMDGNMISLSVSTFITIDELKVKLYEKKGYFPTKVTLIYAGKLLEDGRSLSDYNIRDGCAIHAVLRLCG

AT1G55060.1 ubiquitin 121.2e-1350Show/hide
Query:  EIFVIAMDGNMISLSVSTFITIDELKVKLYEKKGYFPTKVTLIYAGKLLEDGRSLSDYNIRDGCAIHAVLRLCG
        +IFV  + G  I+L V +  TID LK K+ +K+G  P +  LI+AGK LEDGR+L+DYNI+    +H VLRL G
Subjt:  EIFVIAMDGNMISLSVSTFITIDELKVKLYEKKGYFPTKVTLIYAGKLLEDGRSLSDYNIRDGCAIHAVLRLCG

AT1G65350.1 ubiquitin 132.6e-1348.65Show/hide
Query:  EIFVIAMDGNMISLSVSTFITIDELKVKLYEKKGYFPTKVTLIYAGKLLEDGRSLSDYNIRDGCAIHAVLRLCG
        +IFV  + G  I+L V +  TID +K K+ +K+G  P +  LI+AGK LEDGR+L+DYNI+    +H VLRL G
Subjt:  EIFVIAMDGNMISLSVSTFITIDELKVKLYEKKGYFPTKVTLIYAGKLLEDGRSLSDYNIRDGCAIHAVLRLCG

AT3G09790.1 ubiquitin 83.7e-1550Show/hide
Query:  EIFVIAMDGNMISLSVSTFITIDELKVKLYEKKGYFPTKVTLIYAGKLLEDGRSLSDYNIRDGCAIHAVLRLCG
        +IFV  + G  I+L V +  TID +K K+ +K+G  P +  LI+AGK LEDGR+L+DYNI+    +H VLRLCG
Subjt:  EIFVIAMDGNMISLSVSTFITIDELKVKLYEKKGYFPTKVTLIYAGKLLEDGRSLSDYNIRDGCAIHAVLRLCG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACTGATCAGTATACTTCATTGACCAATAATGGCGATATGTCAATTAAATTAGCAGCCATTGAAGCTGTGCAGGCATTACCCGACATCCACGAAGATCTTCTTTT
TGAAGCCTTTGATTTTCTTGAGAAGAGAAAGCATGCCAAAATGTTTATGGCAATTAATGAAAACTTACGAAGTAAATGGTTGAGAAGGAAGCTTTGGCAAGAGCCAAGTG
AAATCTTCGTGATTGCAATGGATGGTAATATGATATCACTCTCGGTTTCCACGTTCATCACAATTGACGAATTGAAAGTTAAACTCTATGAAAAGAAAGGATATTTTCCA
ACCAAAGTCACATTAATTTATGCTGGAAAGCTGCTTGAAGATGGAAGAAGTCTATCAGACTATAACATAAGAGATGGTTGTGCTATTCATGCTGTCTTACGATTATGTGG
CTGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAACTGATCAGTATACTTCATTGACCAATAATGGCGATATGTCAATTAAATTAGCAGCCATTGAAGCTGTGCAGGCATTACCCGACATCCACGAAGATCTTCTTTT
TGAAGCCTTTGATTTTCTTGAGAAGAGAAAGCATGCCAAAATGTTTATGGCAATTAATGAAAACTTACGAAGTAAATGGTTGAGAAGGAAGCTTTGGCAAGAGCCAAGTG
AAATCTTCGTGATTGCAATGGATGGTAATATGATATCACTCTCGGTTTCCACGTTCATCACAATTGACGAATTGAAAGTTAAACTCTATGAAAAGAAAGGATATTTTCCA
ACCAAAGTCACATTAATTTATGCTGGAAAGCTGCTTGAAGATGGAAGAAGTCTATCAGACTATAACATAAGAGATGGTTGTGCTATTCATGCTGTCTTACGATTATGTGG
CTGTTAA
Protein sequenceShow/hide protein sequence
MATDQYTSLTNNGDMSIKLAAIEAVQALPDIHEDLLFEAFDFLEKRKHAKMFMAINENLRSKWLRRKLWQEPSEIFVIAMDGNMISLSVSTFITIDELKVKLYEKKGYFP
TKVTLIYAGKLLEDGRSLSDYNIRDGCAIHAVLRLCGC