; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0017882 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0017882
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationchr05:4734329..4735081
RNA-Seq ExpressionIVF0017882
SyntenyIVF0017882
Gene Ontology termsNA
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045109.1 putative mitochondrial protein [Cucumis melo var. makuwa]7.23e-16591.6Show/hide
Query:  MGYSDKLLNDLIQALNSEFALKDLGDLSYFLGVEVSYPTNEGMILSQAKYITDLLQKMKMFDAKPISTPMVSGQLVSAHHGENFHDINLYRSTVRALQYA
        MG SDKLLNDLIQALNSEFALKDLG LSYFLGVEVSYPTN GM LSQAKYITDLLQK KMFDAKPISTPMVSGQLVSAH GENFHDI+LYR TV ALQYA
Subjt:  MGYSDKLLNDLIQALNSEFALKDLGDLSYFLGVEVSYPTNEGMILSQAKYITDLLQKMKMFDAKPISTPMVSGQLVSAHHGENFHDINLYRSTVRALQYA

Query:  TLTHPGISYNVNKACQFMHSPKLIHWQLVKRILRYLKGSLSHGLWLRCSTNLSIVGFANGDWASDPDDRKSIFGYCVYFGNNLVSWGSKKQSIISRSSTD
        TLTHP ISY+VNKACQFMHSPKLIHWQLVKRILRYLKGSLSHGLWLRCSTNLS+VGFA+ DWASDPDDRKS  GYCVYFGNNLVSWGSKKQSII RSST+
Subjt:  TLTHPGISYNVNKACQFMHSPKLIHWQLVKRILRYLKGSLSHGLWLRCSTNLSIVGFANGDWASDPDDRKSIFGYCVYFGNNLVSWGSKKQSIISRSSTD

Query:  IEYRCLALLATESVWINSLLCDLGITLSQPPVLWCDNLSAFHLSANPILH
         EYRCLALLATE VWINSLLCDLGITLSQPPVLWCDNLSA HLSANPILH
Subjt:  IEYRCLALLATESVWINSLLCDLGITLSQPPVLWCDNLSAFHLSANPILH

KAA0046194.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.74e-15485.43Show/hide
Query:  MGYSDKLLNDLIQALNSEFALKDLGDLSYFLGVEVSYPTNEGMILSQAKYITDLLQKMKMFDAKPISTPMVSGQLVSAHHGENFHDINLYRSTVRAL---
        MG S+KLLNDL QALNSEF+LKDLGDLSYFLG+EVSYPTN GM LSQAKYITDLLQK K+FDAKPISTPMVSGQLVSAH GENFH I+LYRSTV AL   
Subjt:  MGYSDKLLNDLIQALNSEFALKDLGDLSYFLGVEVSYPTNEGMILSQAKYITDLLQKMKMFDAKPISTPMVSGQLVSAHHGENFHDINLYRSTVRAL---

Query:  -QYATLTHPGISYNVNKACQFMHSPKLIHWQLVKRILRYLKGSLSHGLWLRCSTNLSIVGFANGDWASDPDDRKSIFGYCVYFGNNLVSWGSKKQSIISR
         QYAT+THP ISY+VNKACQFMHSPKLIHWQLVKRILRYLKGSLSHGLWL+CSTNLSIVGF + DWASDPDD KS  GYCVYFGN LVSWGSKKQSIIS+
Subjt:  -QYATLTHPGISYNVNKACQFMHSPKLIHWQLVKRILRYLKGSLSHGLWLRCSTNLSIVGFANGDWASDPDDRKSIFGYCVYFGNNLVSWGSKKQSIISR

Query:  SSTDIEYRCLALLATESVWINSLLCDLGITLSQPPVLWCDNLSAFHLSANPILH
        SST+ EYR LALLATE VWINSLLCDLGITL+QPP+LWCDNLSA HLS NPILH
Subjt:  SSTDIEYRCLALLATESVWINSLLCDLGITLSQPPVLWCDNLSAFHLSANPILH

KAA0052371.1 putative mitochondrial protein [Cucumis melo var. makuwa]9.92e-12976.8Show/hide
Query:  MGYSDKLLNDLIQALNSEFALKDLGDLSYFLGVEVSYPTNEGMILSQAKYITDLLQKMKMFDAKPISTPMVSGQLVSAHHGENFHDINLYRSTVRALQYA
        MG S K +N L+ +LNS+FALKDLG LSYFLGVEVSYPTN  + LSQ+KYITDLLQ+ KM DAKPISTPMVSG L+SA  GE FHD++L RS V ALQYA
Subjt:  MGYSDKLLNDLIQALNSEFALKDLGDLSYFLGVEVSYPTNEGMILSQAKYITDLLQKMKMFDAKPISTPMVSGQLVSAHHGENFHDINLYRSTVRALQYA

Query:  TLTHPGISYNVNKACQFMHSPKLIHWQLVKRILRYLKGSLSHGLWLRCSTNLSIVGFANGDWASDPDDRKSIFGYCVYFGNNLVSWGSKKQSIISRSSTD
        TLTHP ISY+VNKACQFMH+PK  HWQLVKRILRYLKG L HGLWL  S N S+VGFA+ DWASDPDDRKS  G CVYFGNNLVSWGSKKQSIISRSST+
Subjt:  TLTHPGISYNVNKACQFMHSPKLIHWQLVKRILRYLKGSLSHGLWLRCSTNLSIVGFANGDWASDPDDRKSIFGYCVYFGNNLVSWGSKKQSIISRSSTD

Query:  IEYRCLALLATESVWINSLLCDLGITLSQPPVLWCDNLSAFHLSANPILH
         EYRCLALLATE VWI SLL DL I L  PP+L CDNLSA H SANPILH
Subjt:  IEYRCLALLATESVWINSLLCDLGITLSQPPVLWCDNLSAFHLSANPILH

KAA0057506.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.58e-179100Show/hide
Query:  MGYSDKLLNDLIQALNSEFALKDLGDLSYFLGVEVSYPTNEGMILSQAKYITDLLQKMKMFDAKPISTPMVSGQLVSAHHGENFHDINLYRSTVRALQYA
        MGYSDKLLNDLIQALNSEFALKDLGDLSYFLGVEVSYPTNEGMILSQAKYITDLLQKMKMFDAKPISTPMVSGQLVSAHHGENFHDINLYRSTVRALQYA
Subjt:  MGYSDKLLNDLIQALNSEFALKDLGDLSYFLGVEVSYPTNEGMILSQAKYITDLLQKMKMFDAKPISTPMVSGQLVSAHHGENFHDINLYRSTVRALQYA

Query:  TLTHPGISYNVNKACQFMHSPKLIHWQLVKRILRYLKGSLSHGLWLRCSTNLSIVGFANGDWASDPDDRKSIFGYCVYFGNNLVSWGSKKQSIISRSSTD
        TLTHPGISYNVNKACQFMHSPKLIHWQLVKRILRYLKGSLSHGLWLRCSTNLSIVGFANGDWASDPDDRKSIFGYCVYFGNNLVSWGSKKQSIISRSSTD
Subjt:  TLTHPGISYNVNKACQFMHSPKLIHWQLVKRILRYLKGSLSHGLWLRCSTNLSIVGFANGDWASDPDDRKSIFGYCVYFGNNLVSWGSKKQSIISRSSTD

Query:  IEYRCLALLATESVWINSLLCDLGITLSQPPVLWCDNLSAFHLSANPILH
        IEYRCLALLATESVWINSLLCDLGITLSQPPVLWCDNLSAFHLSANPILH
Subjt:  IEYRCLALLATESVWINSLLCDLGITLSQPPVLWCDNLSAFHLSANPILH

XP_016903342.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]4.46e-184100Show/hide
Query:  MGYSDKLLNDLIQALNSEFALKDLGDLSYFLGVEVSYPTNEGMILSQAKYITDLLQKMKMFDAKPISTPMVSGQLVSAHHGENFHDINLYRSTVRALQYA
        MGYSDKLLNDLIQALNSEFALKDLGDLSYFLGVEVSYPTNEGMILSQAKYITDLLQKMKMFDAKPISTPMVSGQLVSAHHGENFHDINLYRSTVRALQYA
Subjt:  MGYSDKLLNDLIQALNSEFALKDLGDLSYFLGVEVSYPTNEGMILSQAKYITDLLQKMKMFDAKPISTPMVSGQLVSAHHGENFHDINLYRSTVRALQYA

Query:  TLTHPGISYNVNKACQFMHSPKLIHWQLVKRILRYLKGSLSHGLWLRCSTNLSIVGFANGDWASDPDDRKSIFGYCVYFGNNLVSWGSKKQSIISRSSTD
        TLTHPGISYNVNKACQFMHSPKLIHWQLVKRILRYLKGSLSHGLWLRCSTNLSIVGFANGDWASDPDDRKSIFGYCVYFGNNLVSWGSKKQSIISRSSTD
Subjt:  TLTHPGISYNVNKACQFMHSPKLIHWQLVKRILRYLKGSLSHGLWLRCSTNLSIVGFANGDWASDPDDRKSIFGYCVYFGNNLVSWGSKKQSIISRSSTD

Query:  IEYRCLALLATESVWINSLLCDLGITLSQPPVLWCDNLSAFHLSANPILH
        IEYRCLALLATESVWINSLLCDLGITLSQPPVLWCDNLSAFHLSANPILH
Subjt:  IEYRCLALLATESVWINSLLCDLGITLSQPPVLWCDNLSAFHLSANPILH

TrEMBL top hitse value%identityAlignment
A0A1S4E543 uncharacterized mitochondrial protein AtMg00810-like1.2e-143100Show/hide
Query:  MGYSDKLLNDLIQALNSEFALKDLGDLSYFLGVEVSYPTNEGMILSQAKYITDLLQKMKMFDAKPISTPMVSGQLVSAHHGENFHDINLYRSTVRALQYA
        MGYSDKLLNDLIQALNSEFALKDLGDLSYFLGVEVSYPTNEGMILSQAKYITDLLQKMKMFDAKPISTPMVSGQLVSAHHGENFHDINLYRSTVRALQYA
Subjt:  MGYSDKLLNDLIQALNSEFALKDLGDLSYFLGVEVSYPTNEGMILSQAKYITDLLQKMKMFDAKPISTPMVSGQLVSAHHGENFHDINLYRSTVRALQYA

Query:  TLTHPGISYNVNKACQFMHSPKLIHWQLVKRILRYLKGSLSHGLWLRCSTNLSIVGFANGDWASDPDDRKSIFGYCVYFGNNLVSWGSKKQSIISRSSTD
        TLTHPGISYNVNKACQFMHSPKLIHWQLVKRILRYLKGSLSHGLWLRCSTNLSIVGFANGDWASDPDDRKSIFGYCVYFGNNLVSWGSKKQSIISRSSTD
Subjt:  TLTHPGISYNVNKACQFMHSPKLIHWQLVKRILRYLKGSLSHGLWLRCSTNLSIVGFANGDWASDPDDRKSIFGYCVYFGNNLVSWGSKKQSIISRSSTD

Query:  IEYRCLALLATESVWINSLLCDLGITLSQPPVLWCDNLSAFHLSANPILH
        IEYRCLALLATESVWINSLLCDLGITLSQPPVLWCDNLSAFHLSANPILH
Subjt:  IEYRCLALLATESVWINSLLCDLGITLSQPPVLWCDNLSAFHLSANPILH

A0A5A7TT17 Putative mitochondrial protein5.0e-12185.43Show/hide
Query:  MGYSDKLLNDLIQALNSEFALKDLGDLSYFLGVEVSYPTNEGMILSQAKYITDLLQKMKMFDAKPISTPMVSGQLVSAHHGENFHDINLYRSTV----RA
        MG S+KLLNDL QALNSEF+LKDLGDLSYFLG+EVSYPTN GM LSQAKYITDLLQK K+FDAKPISTPMVSGQLVSAH GENFH I+LYRSTV     A
Subjt:  MGYSDKLLNDLIQALNSEFALKDLGDLSYFLGVEVSYPTNEGMILSQAKYITDLLQKMKMFDAKPISTPMVSGQLVSAHHGENFHDINLYRSTV----RA

Query:  LQYATLTHPGISYNVNKACQFMHSPKLIHWQLVKRILRYLKGSLSHGLWLRCSTNLSIVGFANGDWASDPDDRKSIFGYCVYFGNNLVSWGSKKQSIISR
        LQYAT+THP ISY+VNKACQFMHSPKLIHWQLVKRILRYLKGSLSHGLWL+CSTNLSIVGF + DWASDPDD KS  GYCVYFGN LVSWGSKKQSIIS+
Subjt:  LQYATLTHPGISYNVNKACQFMHSPKLIHWQLVKRILRYLKGSLSHGLWLRCSTNLSIVGFANGDWASDPDDRKSIFGYCVYFGNNLVSWGSKKQSIISR

Query:  SSTDIEYRCLALLATESVWINSLLCDLGITLSQPPVLWCDNLSAFHLSANPILH
        SST+ EYR LALLATE VWINSLLCDLGITL+QPP+LWCDNLSA HLS NPILH
Subjt:  SSTDIEYRCLALLATESVWINSLLCDLGITLSQPPVLWCDNLSAFHLSANPILH

A0A5A7UFS3 Putative mitochondrial protein2.5e-10476.8Show/hide
Query:  MGYSDKLLNDLIQALNSEFALKDLGDLSYFLGVEVSYPTNEGMILSQAKYITDLLQKMKMFDAKPISTPMVSGQLVSAHHGENFHDINLYRSTVRALQYA
        MG S K +N L+ +LNS+FALKDLG LSYFLGVEVSYPTN  + LSQ+KYITDLLQ+ KM DAKPISTPMVSG L+SA  GE FHD++L RS V ALQYA
Subjt:  MGYSDKLLNDLIQALNSEFALKDLGDLSYFLGVEVSYPTNEGMILSQAKYITDLLQKMKMFDAKPISTPMVSGQLVSAHHGENFHDINLYRSTVRALQYA

Query:  TLTHPGISYNVNKACQFMHSPKLIHWQLVKRILRYLKGSLSHGLWLRCSTNLSIVGFANGDWASDPDDRKSIFGYCVYFGNNLVSWGSKKQSIISRSSTD
        TLTHP ISY+VNKACQFMH+PK  HWQLVKRILRYLKG L HGLWL  S N S+VGFA+ DWASDPDDRKS  G CVYFGNNLVSWGSKKQSIISRSST+
Subjt:  TLTHPGISYNVNKACQFMHSPKLIHWQLVKRILRYLKGSLSHGLWLRCSTNLSIVGFANGDWASDPDDRKSIFGYCVYFGNNLVSWGSKKQSIISRSSTD

Query:  IEYRCLALLATESVWINSLLCDLGITLSQPPVLWCDNLSAFHLSANPILH
         EYRCLALLATE VWI SLL DL I L  PP+L CDNLSA H SANPILH
Subjt:  IEYRCLALLATESVWINSLLCDLGITLSQPPVLWCDNLSAFHLSANPILH

A0A5A7UTP6 Putative mitochondrial protein1.2e-143100Show/hide
Query:  MGYSDKLLNDLIQALNSEFALKDLGDLSYFLGVEVSYPTNEGMILSQAKYITDLLQKMKMFDAKPISTPMVSGQLVSAHHGENFHDINLYRSTVRALQYA
        MGYSDKLLNDLIQALNSEFALKDLGDLSYFLGVEVSYPTNEGMILSQAKYITDLLQKMKMFDAKPISTPMVSGQLVSAHHGENFHDINLYRSTVRALQYA
Subjt:  MGYSDKLLNDLIQALNSEFALKDLGDLSYFLGVEVSYPTNEGMILSQAKYITDLLQKMKMFDAKPISTPMVSGQLVSAHHGENFHDINLYRSTVRALQYA

Query:  TLTHPGISYNVNKACQFMHSPKLIHWQLVKRILRYLKGSLSHGLWLRCSTNLSIVGFANGDWASDPDDRKSIFGYCVYFGNNLVSWGSKKQSIISRSSTD
        TLTHPGISYNVNKACQFMHSPKLIHWQLVKRILRYLKGSLSHGLWLRCSTNLSIVGFANGDWASDPDDRKSIFGYCVYFGNNLVSWGSKKQSIISRSSTD
Subjt:  TLTHPGISYNVNKACQFMHSPKLIHWQLVKRILRYLKGSLSHGLWLRCSTNLSIVGFANGDWASDPDDRKSIFGYCVYFGNNLVSWGSKKQSIISRSSTD

Query:  IEYRCLALLATESVWINSLLCDLGITLSQPPVLWCDNLSAFHLSANPILH
        IEYRCLALLATESVWINSLLCDLGITLSQPPVLWCDNLSAFHLSANPILH
Subjt:  IEYRCLALLATESVWINSLLCDLGITLSQPPVLWCDNLSAFHLSANPILH

A0A5D3DK36 Putative mitochondrial protein5.0e-12991.6Show/hide
Query:  MGYSDKLLNDLIQALNSEFALKDLGDLSYFLGVEVSYPTNEGMILSQAKYITDLLQKMKMFDAKPISTPMVSGQLVSAHHGENFHDINLYRSTVRALQYA
        MG SDKLLNDLIQALNSEFALKDLG LSYFLGVEVSYPTN GM LSQAKYITDLLQK KMFDAKPISTPMVSGQLVSAH GENFHDI+LYR TV ALQYA
Subjt:  MGYSDKLLNDLIQALNSEFALKDLGDLSYFLGVEVSYPTNEGMILSQAKYITDLLQKMKMFDAKPISTPMVSGQLVSAHHGENFHDINLYRSTVRALQYA

Query:  TLTHPGISYNVNKACQFMHSPKLIHWQLVKRILRYLKGSLSHGLWLRCSTNLSIVGFANGDWASDPDDRKSIFGYCVYFGNNLVSWGSKKQSIISRSSTD
        TLTHP ISY+VNKACQFMHSPKLIHWQLVKRILRYLKGSLSHGLWLRCSTNLS+VGFA+ DWASDPDDRKS  GYCVYFGNNLVSWGSKKQSII RSST+
Subjt:  TLTHPGISYNVNKACQFMHSPKLIHWQLVKRILRYLKGSLSHGLWLRCSTNLSIVGFANGDWASDPDDRKSIFGYCVYFGNNLVSWGSKKQSIISRSSTD

Query:  IEYRCLALLATESVWINSLLCDLGITLSQPPVLWCDNLSAFHLSANPILH
         EYRCLALLATE VWINSLLCDLGITLSQPPVLWCDNLSA HLSANPILH
Subjt:  IEYRCLALLATESVWINSLLCDLGITLSQPPVLWCDNLSAFHLSANPILH

SwissProt top hitse value%identityAlignment
P04146 Copia protein1.4e-2729.6Show/hide
Query:  LNDLIQALNSEFALKDLGDLSYFLGVEVSYPTNEGMILSQAKYITDLLQKMKMFDAKPISTPM---VSGQLVSAHHGENFHDINLYRSTVRALQYATL-T
        +N+  + L  +F + DL ++ +F+G+ +    ++ + LSQ+ Y+  +L K  M +   +STP+   ++ +L+++    N       RS +  L Y  L T
Subjt:  LNDLIQALNSEFALKDLGDLSYFLGVEVSYPTNEGMILSQAKYITDLLQKMKMFDAKPISTPM---VSGQLVSAHHGENFHDINLYRSTVRALQYATL-T

Query:  HPGISYNVNKACQFMHSPKLIHWQLVKRILRYLKGSLSHGLWLR--CSTNLSIVGFANGDWASDPDDRKSIFGYCV-YFGNNLVSWGSKKQSIISRSSTD
         P ++  VN   ++        WQ +KR+LRYLKG++   L  +   +    I+G+ + DWA    DRKS  GY    F  NL+ W +K+Q+ ++ SST+
Subjt:  HPGISYNVNKACQFMHSPKLIHWQLVKRILRYLKGSLSHGLWLR--CSTNLSIVGFANGDWASDPDDRKSIFGYCV-YFGNNLVSWGSKKQSIISRSSTD

Query:  IEYRCLALLATESVWINSLLCDLGITLSQPPVLWCDNLSAFHLSANPILH
         EY  L     E++W+  LL  + I L  P  ++ DN     ++ NP  H
Subjt:  IEYRCLALLATESVWINSLLCDLGITLSQPPVLWCDNLSAFHLSANPILH

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-945.1e-3033.85Show/hide
Query:  MGYSDKLLNDLIQALNSEFALKDLGDLSYFLGVE-VSYPTNEGMILSQAKYITDLLQKMKMFDAKPISTPMVSGQL--------VSAHHGENFHDINLYR
        +G    L+  L   L+  F +KDLG     LG++ V   T+  + LSQ KYI  +L++  M +AKP+STP+ +G L         +     N   +  Y 
Subjt:  MGYSDKLLNDLIQALNSEFALKDLGDLSYFLGVE-VSYPTNEGMILSQAKYITDLLQKMKMFDAKPISTPMVSGQL--------VSAHHGENFHDINLYR

Query:  STVRALQYATL-THPGISYNVNKACQFMHSPKLIHWQLVKRILRYLKGSLSHGLWLRCSTNLSIVGFANGDWASDPDDRKSIFGYCVYFGNNLVSWGSKK
        S V +L YA + T P I++ V    +F+ +P   HW+ VK ILRYL+G+    L    S  + + G+ + D A D D+RKS  GY   F    +SW SK 
Subjt:  STVRALQYATL-THPGISYNVNKACQFMHSPKLIHWQLVKRILRYLKGSLSHGLWLRCSTNLSIVGFANGDWASDPDDRKSIFGYCVYFGNNLVSWGSKK

Query:  QSIISRSSTDIEYRCLALLATESVWINSLLCDLGITLSQPPVLWCDNLSAFHLSANPILH
        Q  ++ S+T+ EY        E +W+   L +LG+   +  V++CD+ SA  LS N + H
Subjt:  QSIISRSSTDIEYRCLALLATESVWINSLLCDLGITLSQPPVLWCDNLSAFHLSANPILH

P92519 Uncharacterized mitochondrial protein AtMg008102.4e-4845.58Show/hide
Query:  GYSDKLLNDLIQALNSEFALKDLGDLSYFLGVEV-SYPTNEGMILSQAKYITDLLQKMKMFDAKPISTPMVSGQLVSAHHGENFHDINLYRSTVRALQYA
        G S+ LLN LI  L+S F++KDLG + YFLG+++ ++P+  G+ LSQ KY   +L    M D KP+STP+   +L S+     + D + +RS V ALQY 
Subjt:  GYSDKLLNDLIQALNSEFALKDLGDLSYFLGVEV-SYPTNEGMILSQAKYITDLLQKMKMFDAKPISTPMVSGQLVSAHHGENFHDINLYRSTVRALQYA

Query:  TLTHPGISYNVNKACQFMHSPKLIHWQLVKRILRYLKGSLSHGLWLRCSTNLSIVGFANGDWASDPDDRKSIFGYCVYFGNNLVSWGSKKQSIISRSSTD
        TLT P ISY VN  CQ MH P L  + L+KR+LRY+KG++ HGL++  ++ L++  F + DWA     R+S  G+C + G N++SW +K+Q  +SRSST+
Subjt:  TLTHPGISYNVNKACQFMHSPKLIHWQLVKRILRYLKGSLSHGLWLRCSTNLSIVGFANGDWASDPDDRKSIFGYCVYFGNNLVSWGSKKQSIISRSSTD

Query:  IEYRCLALLATESVW
         EYR LAL A E  W
Subjt:  IEYRCLALLATESVW

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE12.6e-5846Show/hide
Query:  GYSDKLLNDLIQALNSEFALKDLGDLSYFLGVEVS-YPTNEGMILSQAKYITDLLQKMKMFDAKPISTPMVSGQLVSAHHGENFHDINLYRSTVRALQYA
        G    LL++ +  L+  F++KD  +L YFLG+E    PT  G+ LSQ +YI DLL +  M  AKP++TPM     +S + G    D   YR  V +LQY 
Subjt:  GYSDKLLNDLIQALNSEFALKDLGDLSYFLGVEVS-YPTNEGMILSQAKYITDLLQKMKMFDAKPISTPMVSGQLVSAHHGENFHDINLYRSTVRALQYA

Query:  TLTHPGISYNVNKACQFMHSPKLIHWQLVKRILRYLKGSLSHGLWLRCSTNLSIVGFANGDWASDPDDRKSIFGYCVYFGNNLVSWGSKKQSIISRSSTD
          T P ISY VN+  QFMH P   H Q +KRILRYL G+ +HG++L+    LS+  +++ DWA D DD  S  GY VY G++ +SW SKKQ  + RSST+
Subjt:  TLTHPGISYNVNKACQFMHSPKLIHWQLVKRILRYLKGSLSHGLWLRCSTNLSIVGFANGDWASDPDDRKSIFGYCVYFGNNLVSWGSKKQSIISRSSTD

Query:  IEYRCLALLATESVWINSLLCDLGITLSQPPVLWCDNLSAFHLSANPILH
         EYR +A  ++E  WI SLL +LGI L++PPV++CDN+ A +L ANP+ H
Subjt:  IEYRCLALLATESVWINSLLCDLGITLSQPPVLWCDNLSAFHLSANPILH

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.2e-5844.58Show/hide
Query:  GYSDKLLNDLIQALNSEFALKDLGDLSYFLGVEVSYPTNEGMILSQAKYITDLLQKMKMFDAKPISTPMVSGQLVSAHHGENFHDINLYRSTVRALQYAT
        G    LL   + AL+  F++K+  DL YFLG+E      +G+ LSQ +Y  DLL +  M  AKP++TPM +   ++ H G    D   YR  V +LQY  
Subjt:  GYSDKLLNDLIQALNSEFALKDLGDLSYFLGVEVSYPTNEGMILSQAKYITDLLQKMKMFDAKPISTPMVSGQLVSAHHGENFHDINLYRSTVRALQYAT

Query:  LTHPGISYNVNKACQFMHSPKLIHWQLVKRILRYLKGSLSHGLWLRCSTNLSIVGFANGDWASDPDDRKSIFGYCVYFGNNLVSWGSKKQSIISRSSTDI
         T P +SY VN+  Q+MH P   HW  +KR+LRYL G+  HG++L+    LS+  +++ DWA D DD  S  GY VY G++ +SW SKKQ  + RSST+ 
Subjt:  LTHPGISYNVNKACQFMHSPKLIHWQLVKRILRYLKGSLSHGLWLRCSTNLSIVGFANGDWASDPDDRKSIFGYCVYFGNNLVSWGSKKQSIISRSSTDI

Query:  EYRCLALLATESVWINSLLCDLGITLSQPPVLWCDNLSAFHLSANPILH
        EYR +A  ++E  WI SLL +LGI LS PPV++CDN+ A +L ANP+ H
Subjt:  EYRCLALLATESVWINSLLCDLGITLSQPPVLWCDNLSAFHLSANPILH

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 81.7e-4938.06Show/hide
Query:  SDKLLNDLIQALNSEFALKDLGDLSYFLGVEVSYPTNEGMILSQAKYITDLLQKMKMFDAKPISTPMVSGQLVSAHHGENFHDINLYRSTVRALQYATLT
        +D  +++L   L S F L+DLG L YFLG+E++  +  G+ + Q KY  DLL +  +   KP S PM      SAH G +F D   YR  +  L Y  +T
Subjt:  SDKLLNDLIQALNSEFALKDLGDLSYFLGVEVSYPTNEGMILSQAKYITDLLQKMKMFDAKPISTPMVSGQLVSAHHGENFHDINLYRSTVRALQYATLT

Query:  HPGISYNVNKACQFMHSPKLIHWQLVKRILRYLKGSLSHGLWLRCSTNLSIVGFANGDWASDPDDRKSIFGYCVYFGNNLVSWGSKKQSIISRSSTDIEY
           IS+ VNK  QF  +P+L H Q V +IL Y+KG++  GL+      + +  F++  + S  D R+S  GYC++ G +L+SW SKKQ ++S+SS + EY
Subjt:  HPGISYNVNKACQFMHSPKLIHWQLVKRILRYLKGSLSHGLWLRCSTNLSIVGFANGDWASDPDDRKSIFGYCVYFGNNLVSWGSKKQSIISRSSTDIEY

Query:  RCLALLATESVWINSLLCDLGITLSQPPVLWCDNLSAFHLSANPILH
        R L+    E +W+     +L + LS+P +L+CDN +A H++ N + H
Subjt:  RCLALLATESVWINSLLCDLGITLSQPPVLWCDNLSAFHLSANPILH

ATMG00240.1 Gag-Pol-related retrotransposon family protein4.4e-1337.18Show/hide
Query:  YATLTHPGISYNVNKACQFMHSPKLIHWQLVKRILRYLKGSLSHGLWLRCSTNLSIVGFANGDWASDPDDRKSIFGYC
        Y T+T P +++ VN+  QF  + +    Q V ++L Y+KG++  GL+   +++L +  FA+ DWAS PD R+S+ G+C
Subjt:  YATLTHPGISYNVNKACQFMHSPKLIHWQLVKRILRYLKGSLSHGLWLRCSTNLSIVGFANGDWASDPDDRKSIFGYC

ATMG00810.1 DNA/RNA polymerases superfamily protein1.7e-4945.58Show/hide
Query:  GYSDKLLNDLIQALNSEFALKDLGDLSYFLGVEV-SYPTNEGMILSQAKYITDLLQKMKMFDAKPISTPMVSGQLVSAHHGENFHDINLYRSTVRALQYA
        G S+ LLN LI  L+S F++KDLG + YFLG+++ ++P+  G+ LSQ KY   +L    M D KP+STP+   +L S+     + D + +RS V ALQY 
Subjt:  GYSDKLLNDLIQALNSEFALKDLGDLSYFLGVEV-SYPTNEGMILSQAKYITDLLQKMKMFDAKPISTPMVSGQLVSAHHGENFHDINLYRSTVRALQYA

Query:  TLTHPGISYNVNKACQFMHSPKLIHWQLVKRILRYLKGSLSHGLWLRCSTNLSIVGFANGDWASDPDDRKSIFGYCVYFGNNLVSWGSKKQSIISRSSTD
        TLT P ISY VN  CQ MH P L  + L+KR+LRY+KG++ HGL++  ++ L++  F + DWA     R+S  G+C + G N++SW +K+Q  +SRSST+
Subjt:  TLTHPGISYNVNKACQFMHSPKLIHWQLVKRILRYLKGSLSHGLWLRCSTNLSIVGFANGDWASDPDDRKSIFGYCVYFGNNLVSWGSKKQSIISRSSTD

Query:  IEYRCLALLATESVW
         EYR LAL A E  W
Subjt:  IEYRCLALLATESVW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATACTCTGACAAGCTTTTAAATGATCTAATTCAAGCTTTGAACAGTGAATTTGCTCTTAAAGACCTTGGAGATCTTAGTTATTTCCTTGGTGTCGAGGTATCGTA
TCCTACAAATGAAGGTATGATCTTATCCCAAGCAAAATATATTACTGATCTCTTGCAGAAGATGAAGATGTTTGATGCCAAACCTATCTCAACTCCAATGGTCAGTGGAC
AGTTAGTATCTGCTCATCACGGTGAGAACTTTCATGATATAAATTTGTATCGTAGTACTGTTAGAGCTTTACAATATGCTACACTTACACATCCTGGGATATCTTACAAT
GTAAACAAAGCATGTCAATTTATGCATTCTCCTAAACTTATACATTGGCAACTTGTTAAGAGAATTTTGAGATATCTCAAGGGTTCCTTATCTCATGGTTTATGGCTTCG
ATGCTCTACAAACTTATCTATTGTTGGTTTTGCCAATGGCGATTGGGCTTCTGATCCTGATGATAGGAAATCCATATTTGGTTATTGTGTCTACTTTGGTAATAATTTGG
TATCTTGGGGATCCAAGAAACAATCTATTATTTCTCGATCAAGCACTGATATAGAATACAGGTGTCTTGCTCTTCTGGCTACTGAATCAGTGTGGATTAATTCTCTTCTT
TGTGACTTAGGTATCACTTTATCTCAACCCCCAGTTTTGTGGTGTGATAACCTCAGTGCTTTTCATTTAAGTGCTAATCCTATTTTGCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGATACTCTGACAAGCTTTTAAATGATCTAATTCAAGCTTTGAACAGTGAATTTGCTCTTAAAGACCTTGGAGATCTTAGTTATTTCCTTGGTGTCGAGGTATCGTA
TCCTACAAATGAAGGTATGATCTTATCCCAAGCAAAATATATTACTGATCTCTTGCAGAAGATGAAGATGTTTGATGCCAAACCTATCTCAACTCCAATGGTCAGTGGAC
AGTTAGTATCTGCTCATCACGGTGAGAACTTTCATGATATAAATTTGTATCGTAGTACTGTTAGAGCTTTACAATATGCTACACTTACACATCCTGGGATATCTTACAAT
GTAAACAAAGCATGTCAATTTATGCATTCTCCTAAACTTATACATTGGCAACTTGTTAAGAGAATTTTGAGATATCTCAAGGGTTCCTTATCTCATGGTTTATGGCTTCG
ATGCTCTACAAACTTATCTATTGTTGGTTTTGCCAATGGCGATTGGGCTTCTGATCCTGATGATAGGAAATCCATATTTGGTTATTGTGTCTACTTTGGTAATAATTTGG
TATCTTGGGGATCCAAGAAACAATCTATTATTTCTCGATCAAGCACTGATATAGAATACAGGTGTCTTGCTCTTCTGGCTACTGAATCAGTGTGGATTAATTCTCTTCTT
TGTGACTTAGGTATCACTTTATCTCAACCCCCAGTTTTGTGGTGTGATAACCTCAGTGCTTTTCATTTAAGTGCTAATCCTATTTTGCATTAA
Protein sequenceShow/hide protein sequence
MGYSDKLLNDLIQALNSEFALKDLGDLSYFLGVEVSYPTNEGMILSQAKYITDLLQKMKMFDAKPISTPMVSGQLVSAHHGENFHDINLYRSTVRALQYATLTHPGISYN
VNKACQFMHSPKLIHWQLVKRILRYLKGSLSHGLWLRCSTNLSIVGFANGDWASDPDDRKSIFGYCVYFGNNLVSWGSKKQSIISRSSTDIEYRCLALLATESVWINSLL
CDLGITLSQPPVLWCDNLSAFHLSANPILH