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IVF0017930 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0017930
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionXylanolytic transcriptional activator xlnR like
Genome locationchr03:25239475..25242718
RNA-Seq ExpressionIVF0017930
SyntenyIVF0017930
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR039632 - Transmembrane protein 42


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598488.1 hypothetical protein SDJN03_08266, partial [Cucurbita argyrosperma subsp. sororia]1.26e-6391.15Show/hide
Query:  EGSKGYVWAISAGLNAAFAAIAAKLFSYTFIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSVNFLCSGLAGFFLFEEALSFQWFVGAILIVIGVLI
        +G KGY+WAISAGLNAAFAAIAAKLFS T IRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFS NFLCSGLAGFFLFEE LSFQWFVGAILI++GVLI
Subjt:  EGSKGYVWAISAGLNAAFAAIAAKLFSYTFIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSVNFLCSGLAGFFLFEEALSFQWFVGAILIVIGVLI

Query:  LNKSSIEKKESKD
        LN+SSIEKKESKD
Subjt:  LNKSSIEKKESKD

XP_004152660.1 uncharacterized protein LOC101208185 [Cucumis sativus]3.56e-6795.61Show/hide
Query:  MEGSKGYVWAISAGLNAAFAAIAAKLFSYTFIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSVNFLCSGLAGFFLFEEALSFQWFVGAILIVIGVL
        MEGSKGYVWAISAGLNAAFAAIAAKLFSYT IRY LVIAFNLAMWGCYVNSLKALSSLQATGTNFS NFLCSGLAGFFLFEEALSF+WFVGA+LIVIGVL
Subjt:  MEGSKGYVWAISAGLNAAFAAIAAKLFSYTFIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSVNFLCSGLAGFFLFEEALSFQWFVGAILIVIGVL

Query:  ILNKSSIEKKESKD
        ILNKSSIEKKESKD
Subjt:  ILNKSSIEKKESKD

XP_008444781.1 PREDICTED: multidrug resistance protein EbrB [Cucumis melo]2.15e-6896.49Show/hide
Query:  MEGSKGYVWAISAGLNAAFAAIAAKLFSYTFIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSVNFLCSGLAGFFLFEEALSFQWFVGAILIVIGVL
        MEGSKGYVWAISAGLNAA +AIAAKLFSYTF RYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFS NFLCSGLAGFFLFEEALSFQWFVGAILIVIGVL
Subjt:  MEGSKGYVWAISAGLNAAFAAIAAKLFSYTFIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSVNFLCSGLAGFFLFEEALSFQWFVGAILIVIGVL

Query:  ILNKSSIEKKESKD
        ILNKSSIEKKESKD
Subjt:  ILNKSSIEKKESKD

XP_022961823.1 uncharacterized protein LOC111462473 [Cucurbita moschata]8.90e-6492.04Show/hide
Query:  EGSKGYVWAISAGLNAAFAAIAAKLFSYTFIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSVNFLCSGLAGFFLFEEALSFQWFVGAILIVIGVLI
        +G KGY+WAISAGLNAAFAAIAAKLFS T IRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFS NFLCSGLAGFFLFEE LSFQWFVGAILIV+GVLI
Subjt:  EGSKGYVWAISAGLNAAFAAIAAKLFSYTFIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSVNFLCSGLAGFFLFEEALSFQWFVGAILIVIGVLI

Query:  LNKSSIEKKESKD
        LN+SSIEKKESKD
Subjt:  LNKSSIEKKESKD

XP_022997366.1 uncharacterized protein LOC111492304 [Cucurbita maxima]1.54e-6492.92Show/hide
Query:  EGSKGYVWAISAGLNAAFAAIAAKLFSYTFIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSVNFLCSGLAGFFLFEEALSFQWFVGAILIVIGVLI
        +G KGY+WAISAGLNAAFAAIAAKLFS T IRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFS NFLCSGLAGFFLFEEALSFQWFVGAILIV+GVLI
Subjt:  EGSKGYVWAISAGLNAAFAAIAAKLFSYTFIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSVNFLCSGLAGFFLFEEALSFQWFVGAILIVIGVLI

Query:  LNKSSIEKKESKD
        LN+SSIEKKESKD
Subjt:  LNKSSIEKKESKD

TrEMBL top hitse value%identityAlignment
A0A0A0LPF1 Uncharacterized protein5.5e-5195.61Show/hide
Query:  MEGSKGYVWAISAGLNAAFAAIAAKLFSYTFIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSVNFLCSGLAGFFLFEEALSFQWFVGAILIVIGVL
        MEGSKGYVWAISAGLNAAFAAIAAKLFSYT IRY LVIAFNLAMWGCYVNSLKALSSLQATGTNFS NFLCSGLAGFFLFEEALSF+WFVGA+LIVIGVL
Subjt:  MEGSKGYVWAISAGLNAAFAAIAAKLFSYTFIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSVNFLCSGLAGFFLFEEALSFQWFVGAILIVIGVL

Query:  ILNKSSIEKKESKD
        ILNKSSIEKKESKD
Subjt:  ILNKSSIEKKESKD

A0A1S3BB59 multidrug resistance protein EbrB6.5e-5296.49Show/hide
Query:  MEGSKGYVWAISAGLNAAFAAIAAKLFSYTFIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSVNFLCSGLAGFFLFEEALSFQWFVGAILIVIGVL
        MEGSKGYVWAISAGLNAA +AIAAKLFSYTF RYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFS NFLCSGLAGFFLFEEALSFQWFVGAILIVIGVL
Subjt:  MEGSKGYVWAISAGLNAAFAAIAAKLFSYTFIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSVNFLCSGLAGFFLFEEALSFQWFVGAILIVIGVL

Query:  ILNKSSIEKKESKD
        ILNKSSIEKKESKD
Subjt:  ILNKSSIEKKESKD

A0A6J1CSW2 uncharacterized protein LOC1110139161.7e-4790.27Show/hide
Query:  EGSKGYVWAISAGLNAAFAAIAAKLFSYTFIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSVNFLCSGLAGFFLFEEALSFQWFVGAILIVIGVLI
        +G KGYVWAISAG NAA AAIAAKLFS T IR+GLVIAFNLAMWGC+VNSLKALSSLQATGTNFS NFLCSGLAGFFLFEEALSFQWFVGA+LIVIGVLI
Subjt:  EGSKGYVWAISAGLNAAFAAIAAKLFSYTFIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSVNFLCSGLAGFFLFEEALSFQWFVGAILIVIGVLI

Query:  LNKSSIEKKESKD
        LNKSSIEKKE+KD
Subjt:  LNKSSIEKKESKD

A0A6J1HCY1 uncharacterized protein LOC1114624732.0e-4892.04Show/hide
Query:  EGSKGYVWAISAGLNAAFAAIAAKLFSYTFIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSVNFLCSGLAGFFLFEEALSFQWFVGAILIVIGVLI
        +G KGY+WAISAGLNAAFAAIAAKLFS T IRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFS NFLCSGLAGFFLFEE LSFQWFVGAILIV+GVLI
Subjt:  EGSKGYVWAISAGLNAAFAAIAAKLFSYTFIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSVNFLCSGLAGFFLFEEALSFQWFVGAILIVIGVLI

Query:  LNKSSIEKKESKD
        LN+SSIEKKESKD
Subjt:  LNKSSIEKKESKD

A0A6J1K7A2 uncharacterized protein LOC1114923045.2e-4992.92Show/hide
Query:  EGSKGYVWAISAGLNAAFAAIAAKLFSYTFIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSVNFLCSGLAGFFLFEEALSFQWFVGAILIVIGVLI
        +G KGY+WAISAGLNAAFAAIAAKLFS T IRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFS NFLCSGLAGFFLFEEALSFQWFVGAILIV+GVLI
Subjt:  EGSKGYVWAISAGLNAAFAAIAAKLFSYTFIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSVNFLCSGLAGFFLFEEALSFQWFVGAILIVIGVLI

Query:  LNKSSIEKKESKD
        LN+SSIEKKESKD
Subjt:  LNKSSIEKKESKD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G30845.1 unknown protein9.3e-3565.45Show/hide
Query:  KGYVWAISAGLNAAFAAIAAKLFSYTFIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSVNFLCSGLAGFFLFEEALSFQWFVGAILIVIGVLILNK
        +GY+ A++AGLNAA AAI+AK F+   I+YGLV+  N+ MW CYVNSL+ALSSLQAT TNF+ NFL SGLAG FLF+E+LSF+WF GA+ I  GVLIL+K
Subjt:  KGYVWAISAGLNAAFAAIAAKLFSYTFIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSVNFLCSGLAGFFLFEEALSFQWFVGAILIVIGVLILNK

Query:  SSIEKKESKD
        SS++KK S D
Subjt:  SSIEKKESKD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGGAGTAAGGGTTACGTGTGGGCAATTTCAGCCGGTCTCAACGCTGCTTTTGCCGCCATTGCAGCCAAGCTTTTCTCCTATACGTTCATTAGGTACGGTCTGGT
AATTGCGTTCAACTTGGCAATGTGGGGATGTTATGTCAATAGCTTAAAAGCTCTCTCATCATTACAAGCTACAGGGACAAACTTTTCAGTTAACTTTCTTTGTTCTGGTC
TAGCTGGTTTCTTTTTGTTCGAAGAAGCATTATCGTTTCAGTGGTTTGTAGGCGCCATATTGATTGTAATCGGCGTGCTGATTTTGAATAAATCGAGCATTGAGAAGAAG
GAAAGCAAGGACTGA
mRNA sequenceShow/hide mRNA sequence
CAAAGAGGAGAATTTTCTTTACTCTGTAAATGGAGGGGAGTAAGGGTTACGTGTGGGCAATTTCAGCCGGTCTCAACGCTGCTTTTGCCGCCATTGCAGCCAAGCTTTTC
TCCTATACGTTCATTAGGTACGGTCTGGTAATTGCGTTCAACTTGGCAATGTGGGGATGTTATGTCAATAGCTTAAAAGCTCTCTCATCATTACAAGCTACAGGGACAAA
CTTTTCAGTTAACTTTCTTTGTTCTGGTCTAGCTGGTTTCTTTTTGTTCGAAGAAGCATTATCGTTTCAGTGGTTTGTAGGCGCCATATTGATTGTAATCGGCGTGCTGA
TTTTGAATAAATCGAGCATTGAGAAGAAGGAAAGCAAGGACTGAACTTTGCTCGTAGGTTGTCACCATTTTTTTCGTCTTGTAGCCCTGCCTTTGAACATGAACAAGTTC
TCTGATTCTTGAAAGAAACGAATGGTCAAATTTGCAACGTGTTCGAAATCAAGCCATTTGAAGTTATAGCAGGGTAGCTCCGTCAACGGCGGACATTGTTCTCGACGTGC
AGGTAGTATCTTGAGATGTGAATTAAAGAACTATCCATCATCTGCTCAAGTTTTCTCAGTTTCGATTATAGAATTTATGACTTCCTGTTTGATAAGTAATGCTCTTCATT
CTTCTACGCAAATATTTAACTATTTGTTGGAATGCATTTGAATTTTGATAAAAATT
Protein sequenceShow/hide protein sequence
MEGSKGYVWAISAGLNAAFAAIAAKLFSYTFIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSVNFLCSGLAGFFLFEEALSFQWFVGAILIVIGVLILNKSSIEKK
ESKD