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IVF0017933 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0017933
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionArabinogalactan peptide 22
Genome locationchr06:1564246..1565417
RNA-Seq ExpressionIVF0017933
SyntenyIVF0017933
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR009424 - Arabinogalactan protein 16/20/22/41


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN57863.1 hypothetical protein Csa_009896 [Cucumis sativus]3.09e-2988.57Show/hide
Query:  MAVLRASCFGIYAAVLIAVFYVLALPVSSAELSSS---PAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH
        MAVLRASCFGIYAA+LIAVFYV+ALP+SSA+LSSS   PAPAPTSDGT IDQGIAYVLMLVALVLTYIIH
Subjt:  MAVLRASCFGIYAAVLIAVFYVLALPVSSAELSSS---PAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH

TYK03143.1 arabinogalactan peptide 22 [Cucumis melo var. makuwa]5.29e-34100Show/hide
Query:  MAVLRASCFGIYAAVLIAVFYVLALPVSSAELSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH
        MAVLRASCFGIYAAVLIAVFYVLALPVSSAELSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH
Subjt:  MAVLRASCFGIYAAVLIAVFYVLALPVSSAELSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH

XP_008465391.1 PREDICTED: arabinogalactan peptide 22 [Cucumis melo]8.80e-3398.51Show/hide
Query:  MAVLRASCFGIYAAVLIAVFYVLALPVSSAELSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH
        MAVLRASCFGIYAAVLIAVFYVLAL VSSAELSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH
Subjt:  MAVLRASCFGIYAAVLIAVFYVLALPVSSAELSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH

XP_022945187.1 arabinogalactan peptide 22-like [Cucurbita moschata]3.43e-2380.6Show/hide
Query:  MAVLRASCFGIYAAVLIAVFYVLALPVSSAELSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH
        MAVLRA CFGIYA V+IA+FYV+ LPVS AE +SSPAPAPTSDGT IDQGIAY+LML+AL LTYIIH
Subjt:  MAVLRASCFGIYAAVLIAVFYVLALPVSSAELSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH

XP_038898060.1 arabinogalactan protein 41-like [Benincasa hispida]1.61e-2889.55Show/hide
Query:  MAVLRASCFGIYAAVLIAVFYVLALPVSSAELSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH
        MAVL+A CFGIYAAV+IAVFYV+ LPVS+AE SSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH
Subjt:  MAVLRASCFGIYAAVLIAVFYVLALPVSSAELSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH

TrEMBL top hitse value%identityAlignment
A0A0A0L7T5 Uncharacterized protein1.3e-2088.57Show/hide
Query:  MAVLRASCFGIYAAVLIAVFYVLALPVSSAELSSS---PAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH
        MAVLRASCFGIYAA+LIAVFYV+ALP+SSA+LSSS   PAPAPTSDGT IDQGIAYVLMLVALVLTYIIH
Subjt:  MAVLRASCFGIYAAVLIAVFYVLALPVSSAELSSS---PAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH

A0A1S3CNS5 arabinogalactan peptide 222.9e-2398.51Show/hide
Query:  MAVLRASCFGIYAAVLIAVFYVLALPVSSAELSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH
        MAVLRASCFGIYAAVLIAVFYVLAL VSSAELSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH
Subjt:  MAVLRASCFGIYAAVLIAVFYVLALPVSSAELSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH

A0A5A7U3P4 Arabinogalactan peptide 222.9e-2398.51Show/hide
Query:  MAVLRASCFGIYAAVLIAVFYVLALPVSSAELSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH
        MAVLRASCFGIYAAVLIAVFYVLAL VSSAELSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH
Subjt:  MAVLRASCFGIYAAVLIAVFYVLALPVSSAELSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH

A0A5D3BTZ5 Arabinogalactan peptide 223.4e-24100Show/hide
Query:  MAVLRASCFGIYAAVLIAVFYVLALPVSSAELSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH
        MAVLRASCFGIYAAVLIAVFYVLALPVSSAELSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH
Subjt:  MAVLRASCFGIYAAVLIAVFYVLALPVSSAELSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH

A0A6J1G081 arabinogalactan peptide 22-like5.8e-1680.6Show/hide
Query:  MAVLRASCFGIYAAVLIAVFYVLALPVSSAELSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH
        MAVLRA CFGIY AV+IA+FYV+ LPVS AE +SSPAPAPTSDGT IDQGIAY+LML+AL LTYIIH
Subjt:  MAVLRASCFGIYAAVLIAVFYVLALPVSSAELSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH

SwissProt top hitse value%identityAlignment
O82337 Arabinogalactan protein 169.5e-0854.84Show/hide
Query:  ASCFGIYAAVLIAVFYVLALPVSSAELSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH
        AS   +    L +  + + L ++ A+ S +PAPAPTSDGT+IDQGIAY+LM+VALVLTY+IH
Subjt:  ASCFGIYAAVLIAVFYVLALPVSSAELSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH

Q8L9T8 Arabinogalactan protein 412.4e-1162.71Show/hide
Query:  FGIYAAVLIAVFYVLALPVSSAELSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH
        FG+  + ++++ + + LP++ A+ S++PAPAPTSDGTTIDQGIAYVLMLVALVLTY+IH
Subjt:  FGIYAAVLIAVFYVLALPVSSAELSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH

Q9FK16 Arabinogalactan protein 221.7e-0959.32Show/hide
Query:  FGIYAAVLIAVFYVLALPVSSAELSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH
        F +    +  +  V+ LP++ +  SSSPAPAPTSDGT+IDQGIAYVLM+VAL LTY IH
Subjt:  FGIYAAVLIAVFYVLALPVSSAELSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH

Q9M373 Arabinogalactan protein 207.3e-0854.84Show/hide
Query:  ASCFGIYAAVLIAVFYVLALPVSSAELSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH
        AS   +    L A  + +  P + A+ S +PAP+PTSDGT+IDQGIAY+LM+VALVLTY+IH
Subjt:  ASCFGIYAAVLIAVFYVLALPVSSAELSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH

Arabidopsis top hitse value%identityAlignment
AT2G46330.1 arabinogalactan protein 166.8e-0954.84Show/hide
Query:  ASCFGIYAAVLIAVFYVLALPVSSAELSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH
        AS   +    L +  + + L ++ A+ S +PAPAPTSDGT+IDQGIAY+LM+VALVLTY+IH
Subjt:  ASCFGIYAAVLIAVFYVLALPVSSAELSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH

AT3G61640.1 arabinogalactan protein 205.2e-0954.84Show/hide
Query:  ASCFGIYAAVLIAVFYVLALPVSSAELSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH
        AS   +    L A  + +  P + A+ S +PAP+PTSDGT+IDQGIAY+LM+VALVLTY+IH
Subjt:  ASCFGIYAAVLIAVFYVLALPVSSAELSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH

AT5G24105.1 arabinogalactan protein 411.7e-1262.71Show/hide
Query:  FGIYAAVLIAVFYVLALPVSSAELSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH
        FG+  + ++++ + + LP++ A+ S++PAPAPTSDGTTIDQGIAYVLMLVALVLTY+IH
Subjt:  FGIYAAVLIAVFYVLALPVSSAELSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH

AT5G53250.1 arabinogalactan protein 221.2e-1059.32Show/hide
Query:  FGIYAAVLIAVFYVLALPVSSAELSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH
        F +    +  +  V+ LP++ +  SSSPAPAPTSDGT+IDQGIAYVLM+VAL LTY IH
Subjt:  FGIYAAVLIAVFYVLALPVSSAELSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGTTTTGAGGGCTTCTTGTTTTGGAATCTATGCTGCTGTGCTTATTGCTGTCTTTTATGTCCTTGCTCTGCCTGTATCTTCAGCTGAACTTTCTTCTTCTCCAGC
TCCAGCTCCAACTAGCGATGGAACCACGATAGACCAAGGAATAGCATATGTTCTAATGCTGGTGGCTTTAGTGCTAACGTACATCATCCATTGA
mRNA sequenceShow/hide mRNA sequence
TTACAAAGAGAGAATGAAGAATCACATGGCTTTGCTTGGATTCCCAAAGCTTACGGTTCAAACATAAACAGTATTAAATCCCCAATTCCTCCATTTCCATTCTCCTCATT
CATAACCTTCGCATTTCTTCTTCTTGTTCTTCTGTCTCTCTCTAGGGTTCTTCTGAGAGAGACAGAGATGGCTGTTTTGAGGGCTTCTTGTTTTGGAATCTATGCTGCTG
TGCTTATTGCTGTCTTTTATGTCCTTGCTCTGCCTGTATCTTCAGCTGAACTTTCTTCTTCTCCAGCTCCAGCTCCAACTAGCGATGGAACCACGATAGACCAAGGAATA
GCATATGTTCTAATGCTGGTGGCTTTAGTGCTAACGTACATCATCCATTGAAAAAACAGAAGAACAATTACCTATGAGTTTCTTTATTTTCAAGTCTATGAGATGAAAGG
AAAGAGGGTGTGGTTGTCTTATTCTATATATTTGCCATATTTTTTTTTGAAGCTTGGCAAAGGTTTCATTTGTAGAAAGTGATCTGTTGTATTTGTATTATAATTTATTT
ATATATTTTTCATTCTTTTTCTTCAATGATTATTGTTTTCCTTTGTGTATTCTTATTGTCCTAAAC
Protein sequenceShow/hide protein sequence
MAVLRASCFGIYAAVLIAVFYVLALPVSSAELSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH