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IVF0017945 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0017945
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionSmall ubiquitin-related modifier
Genome locationchr11:20869505..20871702
RNA-Seq ExpressionIVF0017945
SyntenyIVF0017945
Gene Ontology termsGO:0016925 - protein sumoylation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0031386 - protein tag (molecular function)
GO:0044389 - ubiquitin-like protein ligase binding (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR022617 - Rad60/SUMO-like domain
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150752.1 small ubiquitin-related modifier 1 [Cucumis sativus]6.85e-6399Show/hide
Query:  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSR
        MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS+R
Subjt:  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSR

XP_008456407.1 PREDICTED: small ubiquitin-related modifier 1 [Cucumis melo]2.39e-63100Show/hide
Query:  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSR
        MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSR
Subjt:  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSR

XP_022943304.1 small ubiquitin-related modifier 1 [Cucurbita moschata]1.38e-62100Show/hide
Query:  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS
        MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS
Subjt:  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS

XP_022970791.1 small ubiquitin-related modifier 1-like [Cucurbita maxima]2.96e-6197.98Show/hide
Query:  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS
        MSGV NTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS+
Subjt:  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS

XP_022986050.1 small ubiquitin-related modifier 1-like [Cucurbita maxima]1.14e-6198.99Show/hide
Query:  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS
        MSGVTNT QEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS
Subjt:  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS

TrEMBL top hitse value%identityAlignment
A0A0A0KDV8 Small ubiquitin-related modifier8.5e-4899Show/hide
Query:  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSR
        MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS+R
Subjt:  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSR

A0A1S3C3V0 Small ubiquitin-related modifier3.8e-48100Show/hide
Query:  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSR
        MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSR
Subjt:  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSR

A0A5A7UHK7 Small ubiquitin-related modifier3.8e-48100Show/hide
Query:  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSR
        MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSR
Subjt:  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSR

A0A6J1FTW7 Small ubiquitin-related modifier1.5e-47100Show/hide
Query:  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS
        MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS
Subjt:  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS

A0A6J1JFC9 Small ubiquitin-related modifier1.5e-47100Show/hide
Query:  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS
        MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS
Subjt:  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS

SwissProt top hitse value%identityAlignment
O13351 Ubiquitin-like protein pmt3/smt39.2e-2355.91Show/hide
Query:  TNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG
        T    ++D KP+ +  HINLKV GQD NEVFF+IK++T+  KLM  YC RQ   +NS+ FL DG R+R +QTP EL+MEDGD+I+A+L Q GG
Subjt:  TNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG

P55852 Small ubiquitin-related modifier 11.8e-4291.4Show/hide
Query:  NTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS
        +  QEEDKKP D  AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD+NSIAFLFDGRRLRAEQTPDEL+MEDGDEIDAMLHQTGGS
Subjt:  NTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS

P55857 Small ubiquitin-related modifier 11.2e-3889.01Show/hide
Query:  EEDKKP---NDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG
        EEDKKP       AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD+N+IAFLFDGRRLR EQTPDELEMEDGDEIDAMLHQTGG
Subjt:  EEDKKP---NDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG

Q9FLP5 Small ubiquitin-related modifier 39.5e-2055.06Show/hide
Query:  EDKKPND--QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG
        +D KP D  Q AH+ LKVK QDG+EV F+ K+S  LKKLM  YCDR+ + L++ AF+F+G R+   +TPDEL+MEDGD IDA    +GG
Subjt:  EDKKPND--QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG

Q9FLP6 Small ubiquitin-related modifier 21.5e-4193.41Show/hide
Query:  EEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSR
        EEDKKP DQ AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD NSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG ++
Subjt:  EEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSR

Arabidopsis top hitse value%identityAlignment
AT4G26840.1 small ubiquitin-like modifier 11.3e-4391.4Show/hide
Query:  NTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS
        +  QEEDKKP D  AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD+NSIAFLFDGRRLRAEQTPDEL+MEDGDEIDAMLHQTGGS
Subjt:  NTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS

AT5G55160.1 small ubiquitin-like modifier 21.1e-4293.41Show/hide
Query:  EEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSR
        EEDKKP DQ AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD NSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG ++
Subjt:  EEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSR

AT5G55160.2 small ubiquitin-like modifier 26.5e-4081.73Show/hide
Query:  EEDKKPNDQSAHINLKVKGQ-------------DGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTG
        EEDKKP DQ AHINLKVKGQ             DGNEVFFRIKRSTQLKKLMNAYCDRQSVD NSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTG
Subjt:  EEDKKPNDQSAHINLKVKGQ-------------DGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTG

Query:  GSSR
        G ++
Subjt:  GSSR

AT5G55170.1 small ubiquitin-like modifier 36.7e-2155.06Show/hide
Query:  EDKKPND--QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG
        +D KP D  Q AH+ LKVK QDG+EV F+ K+S  LKKLM  YCDR+ + L++ AF+F+G R+   +TPDEL+MEDGD IDA    +GG
Subjt:  EDKKPND--QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG

AT5G55856.1 Ubiquitin-like superfamily protein4.4e-2052.27Show/hide
Query:  DKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS
        DKKP   S+HI +KVK QD   V+FRIKR  +L+K+M+AY D+  V+++++ FLFDG R++  QTP+EL +ED DEI+A   Q GG S
Subjt:  DKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGGGGTCACAAACACGCAGCAGGAGGAAGACAAGAAGCCCAACGACCAGTCCGCGCATATAAACCTCAAGGTCAAAGGCCAGGATGGGAATGAGGTGTTCTTCAG
GATTAAAAGGAGCACTCAGCTGAAGAAACTAATGAATGCTTACTGTGATAGACAATCTGTGGATTTGAACTCCATTGCTTTTCTATTTGATGGTCGTCGCCTTCGAGCAG
AGCAAACTCCCGATGAGCTAGAGATGGAGGATGGGGATGAGATTGATGCAATGTTGCACCAGACTGGTGGATCGTCTCGTTGA
mRNA sequenceShow/hide mRNA sequence
CAAAAACTTATTCCCTCTTTTTGACGGGGCGGAAATCGGGAGAATTGGAGCCCTAATCTCTGGTATATCGGCGAAGATTGAAGAATGTCGGGGGTCACAAACACGCAGCA
GGAGGAAGACAAGAAGCCCAACGACCAGTCCGCGCATATAAACCTCAAGGTCAAAGGCCAGGATGGGAATGAGGTGTTCTTCAGGATTAAAAGGAGCACTCAGCTGAAGA
AACTAATGAATGCTTACTGTGATAGACAATCTGTGGATTTGAACTCCATTGCTTTTCTATTTGATGGTCGTCGCCTTCGAGCAGAGCAAACTCCCGATGAGCTAGAGATG
GAGGATGGGGATGAGATTGATGCAATGTTGCACCAGACTGGTGGATCGTCTCGTTGAAATTGGTGGCGTTGGTTCTGCTCCATTAGTGCAAGCATTTTCATTGAATCGGG
AATGTGGGTCATTTAGAGGTTCTTGCAGGTTTATTATTAAGTGTAGATTCCCTTAAGAAGACTTCCCTACGTTTTAAGCTTTATATTGTGAGGTCAATGGCTATCTTCTG
GTCTCAGTTATTTGCTTGGCTCTTTGTATGGATGGAAGCTGTTAGTAGCATAGTCGAATATTTTGTAAGCAGTCTCGTTTTTTCTTCACGTTGTGAGCTTTCTGATAACA
AAATGCTAAGACCATCTTAAAATTTGGAATATATTCGTCGATCTTCCAGTTTTATAGTTATGATCGAATTTGGAACCATAGCTCATCTGAACCACCAAC
Protein sequenceShow/hide protein sequence
MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSR