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IVF0018024 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0018024
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRT_RNaseH domain-containing protein
Genome locationchr01:21824928..21825362
RNA-Seq ExpressionIVF0018024
SyntenyIVF0018024
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037872.1 uncharacterized protein E6C27_scaffold36G00360 [Cucumis melo var. makuwa]1.15e-5669.57Show/hide
Query:  MNDFETVALTQAICDVFKNGVVEKMTYPGSFIVPCSIGGMDLGCARCNLEANINLIFLSIFKKLGIGEVQPTQMAFQITDKSITRPKGKIEEVLVKVDKF
        +NDF+T+AL QA  D++KNGV+EKMTYPGSF VPCSI GMDLG   C+L A+INL+ LSIFKKL I EVQPT M FQ+ D+SIT PKGKIE+VLVKVDKF
Subjt:  MNDFETVALTQAICDVFKNGVVEKMTYPGSFIVPCSIGGMDLGCARCNLEANINLIFLSIFKKLGIGEVQPTQMAFQITDKSITRPKGKIEEVLVKVDKF

Query:  LFHAYFVILDFKADREVPIILGWPFLSIGRALINVHQG
        LF A F+ILD++AD EV IIL   FLS GRAL  +HQG
Subjt:  LFHAYFVILDFKADREVPIILGWPFLSIGRALINVHQG

KAA0042146.1 uncharacterized protein E6C27_scaffold67G006360 [Cucumis melo var. makuwa]1.17e-102100Show/hide
Query:  MNDFETVALTQAICDVFKNGVVEKMTYPGSFIVPCSIGGMDLGCARCNLEANINLIFLSIFKKLGIGEVQPTQMAFQITDKSITRPKGKIEEVLVKVDKF
        MNDFETVALTQAICDVFKNGVVEKMTYPGSFIVPCSIGGMDLGCARCNLEANINLIFLSIFKKLGIGEVQPTQMAFQITDKSITRPKGKIEEVLVKVDKF
Subjt:  MNDFETVALTQAICDVFKNGVVEKMTYPGSFIVPCSIGGMDLGCARCNLEANINLIFLSIFKKLGIGEVQPTQMAFQITDKSITRPKGKIEEVLVKVDKF

Query:  LFHAYFVILDFKADREVPIILGWPFLSIGRALINVHQGGIDYAA
        LFHAYFVILDFKADREVPIILGWPFLSIGRALINVHQGGIDYAA
Subjt:  LFHAYFVILDFKADREVPIILGWPFLSIGRALINVHQGGIDYAA

KAA0062776.1 uncharacterized protein E6C27_scaffold382G001190 [Cucumis melo var. makuwa]2.34e-5564.96Show/hide
Query:  MNDFETVALTQAICDVFKNGVVEKMTYPGSFIVPCSIGGMDLGCARCNLEANINLIFLSIFKKLGIGEVQPTQMAFQITDKSITRPKGKIEEVLVKVDKF
        MN++ETV LTQA  ++FKN V +KMTYP SF V CSI  MDLG   CNL A+INL+ LSIFKKLG+ E QPT+M  Q  D+SITR +GKI++VL+KVDKF
Subjt:  MNDFETVALTQAICDVFKNGVVEKMTYPGSFIVPCSIGGMDLGCARCNLEANINLIFLSIFKKLGIGEVQPTQMAFQITDKSITRPKGKIEEVLVKVDKF

Query:  LFHAYFVILDFKADREVPIILGWPFLSIGRALINVHQ
        LF A F+ILD++ADREVPIIL   FL  G ALI+VHQ
Subjt:  LFHAYFVILDFKADREVPIILGWPFLSIGRALINVHQ

XP_008447648.1 PREDICTED: uncharacterized protein LOC103490055 [Cucumis melo]3.00e-6069.57Show/hide
Query:  MNDFETVALTQAICDVFKNGVVEKMTYPGSFIVPCSIGGMDLGCARCNLEANINLIFLSIFKKLGIGEVQPTQMAFQITDKSITRPKGKIEEVLVKVDKF
        +NDF+T+AL QA  D++KNGV+EKMTYPGSF VPCSI GMDLG   C+L A+INL+ LSIFKKL I EVQPT M FQ+ D+SIT PKGKIE+VLVKVDKF
Subjt:  MNDFETVALTQAICDVFKNGVVEKMTYPGSFIVPCSIGGMDLGCARCNLEANINLIFLSIFKKLGIGEVQPTQMAFQITDKSITRPKGKIEEVLVKVDKF

Query:  LFHAYFVILDFKADREVPIILGWPFLSIGRALINVHQG
        LF A F+ILD++AD EV IIL   FLS GRAL  +HQG
Subjt:  LFHAYFVILDFKADREVPIILGWPFLSIGRALINVHQG

XP_008455795.1 PREDICTED: uncharacterized protein LOC103495890 [Cucumis melo]3.22e-5665.69Show/hide
Query:  MNDFETVALTQAICDVFKNGVVEKMTYPGSFIVPCSIGGMDLGCARCNLEANINLIFLSIFKKLGIGEVQPTQMAFQITDKSITRPKGKIEEVLVKVDKF
        MN++ETV LTQA  ++FKN V +KMTYP SF V CSI  MDLG   CNL A+INL+ LSIFKKLG+ E QPT+M  Q  D+SITRP+GKI++VL+KVDKF
Subjt:  MNDFETVALTQAICDVFKNGVVEKMTYPGSFIVPCSIGGMDLGCARCNLEANINLIFLSIFKKLGIGEVQPTQMAFQITDKSITRPKGKIEEVLVKVDKF

Query:  LFHAYFVILDFKADREVPIILGWPFLSIGRALINVHQ
        LF A F+ILD++ADREVPIIL   FL  G ALI+VHQ
Subjt:  LFHAYFVILDFKADREVPIILGWPFLSIGRALINVHQ

TrEMBL top hitse value%identityAlignment
A0A1S3BHX3 uncharacterized protein LOC1034900553.3e-4569.57Show/hide
Query:  MNDFETVALTQAICDVFKNGVVEKMTYPGSFIVPCSIGGMDLGCARCNLEANINLIFLSIFKKLGIGEVQPTQMAFQITDKSITRPKGKIEEVLVKVDKF
        +NDF+T+AL QA  D++KNGV+EKMTYPGSF VPCSI GMDLG   C+L A+INL+ LSIFKKL I EVQPT M FQ+ D+SIT PKGKIE+VLVKVDKF
Subjt:  MNDFETVALTQAICDVFKNGVVEKMTYPGSFIVPCSIGGMDLGCARCNLEANINLIFLSIFKKLGIGEVQPTQMAFQITDKSITRPKGKIEEVLVKVDKF

Query:  LFHAYFVILDFKADREVPIILGWPFLSIGRALINVHQG
        LF A F+ILD++AD EV IIL   FLS GRAL  +HQG
Subjt:  LFHAYFVILDFKADREVPIILGWPFLSIGRALINVHQG

A0A1S3C2F1 uncharacterized protein LOC1034958902.7e-4265.69Show/hide
Query:  MNDFETVALTQAICDVFKNGVVEKMTYPGSFIVPCSIGGMDLGCARCNLEANINLIFLSIFKKLGIGEVQPTQMAFQITDKSITRPKGKIEEVLVKVDKF
        MN++ETV LTQA  ++FKN V +KMTYP SF V CSI  MDLG   CNL A+INL+ LSIFKKLG+ E QPT+M  Q  D+SITRP+GKI++VL+KVDKF
Subjt:  MNDFETVALTQAICDVFKNGVVEKMTYPGSFIVPCSIGGMDLGCARCNLEANINLIFLSIFKKLGIGEVQPTQMAFQITDKSITRPKGKIEEVLVKVDKF

Query:  LFHAYFVILDFKADREVPIILGWPFLSIGRALINVHQ
        LF A F+ILD++ADREVPIIL   FL  G ALI+VHQ
Subjt:  LFHAYFVILDFKADREVPIILGWPFLSIGRALINVHQ

A0A5A7V8K1 Uncharacterized protein2.2e-4164.96Show/hide
Query:  MNDFETVALTQAICDVFKNGVVEKMTYPGSFIVPCSIGGMDLGCARCNLEANINLIFLSIFKKLGIGEVQPTQMAFQITDKSITRPKGKIEEVLVKVDKF
        MN++ETV LTQA  ++FKN V +KMTYP SF V CSI  MDLG   CNL A+INL+ LSIFKKLG+ E QPT+M  Q  D+SITR +GKI++VL+KVDKF
Subjt:  MNDFETVALTQAICDVFKNGVVEKMTYPGSFIVPCSIGGMDLGCARCNLEANINLIFLSIFKKLGIGEVQPTQMAFQITDKSITRPKGKIEEVLVKVDKF

Query:  LFHAYFVILDFKADREVPIILGWPFLSIGRALINVHQ
        LF A F+ILD++ADREVPIIL   FL  G ALI+VHQ
Subjt:  LFHAYFVILDFKADREVPIILGWPFLSIGRALINVHQ

A0A5D3BDT2 RT_RNaseH domain-containing protein3.3e-4569.57Show/hide
Query:  MNDFETVALTQAICDVFKNGVVEKMTYPGSFIVPCSIGGMDLGCARCNLEANINLIFLSIFKKLGIGEVQPTQMAFQITDKSITRPKGKIEEVLVKVDKF
        +NDF+T+AL QA  D++KNGV+EKMTYPGSF VPCSI GMDLG   C+L A+INL+ LSIFKKL I EVQPT M FQ+ D+SIT PKGKIE+VLVKVDKF
Subjt:  MNDFETVALTQAICDVFKNGVVEKMTYPGSFIVPCSIGGMDLGCARCNLEANINLIFLSIFKKLGIGEVQPTQMAFQITDKSITRPKGKIEEVLVKVDKF

Query:  LFHAYFVILDFKADREVPIILGWPFLSIGRALINVHQG
        LF A F+ILD++AD EV IIL   FLS GRAL  +HQG
Subjt:  LFHAYFVILDFKADREVPIILGWPFLSIGRALINVHQG

A0A5D3DSI6 Uncharacterized protein5.7e-77100Show/hide
Query:  MNDFETVALTQAICDVFKNGVVEKMTYPGSFIVPCSIGGMDLGCARCNLEANINLIFLSIFKKLGIGEVQPTQMAFQITDKSITRPKGKIEEVLVKVDKF
        MNDFETVALTQAICDVFKNGVVEKMTYPGSFIVPCSIGGMDLGCARCNLEANINLIFLSIFKKLGIGEVQPTQMAFQITDKSITRPKGKIEEVLVKVDKF
Subjt:  MNDFETVALTQAICDVFKNGVVEKMTYPGSFIVPCSIGGMDLGCARCNLEANINLIFLSIFKKLGIGEVQPTQMAFQITDKSITRPKGKIEEVLVKVDKF

Query:  LFHAYFVILDFKADREVPIILGWPFLSIGRALINVHQGGIDYAA
        LFHAYFVILDFKADREVPIILGWPFLSIGRALINVHQGGIDYAA
Subjt:  LFHAYFVILDFKADREVPIILGWPFLSIGRALINVHQGGIDYAA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGATTTTGAGACTGTAGCTCTAACGCAGGCAATATGTGACGTCTTCAAGAATGGGGTAGTAGAGAAGATGACATACCCTGGAAGCTTCATTGTACCGTGCTCAAT
AGGTGGCATGGATCTTGGTTGTGCACGATGCAATCTAGAAGCAAATATCAACTTAATATTTCTCTCTATCTTCAAGAAATTAGGGATAGGGGAGGTTCAACCTACACAAA
TGGCGTTCCAAATAACTGATAAATCCATCACGCGACCTAAGGGAAAGATCGAAGAGGTGTTGGTTAAGGTGGACAAGTTTTTATTCCACGCATACTTCGTTATTCTGGAC
TTCAAAGCTGATCGGGAGGTTCCTATCATTTTAGGGTGGCCGTTTCTGTCAATAGGTCGTGCCCTTATTAATGTCCACCAAGGGGGAATTGACTATGCGGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATGATTTTGAGACTGTAGCTCTAACGCAGGCAATATGTGACGTCTTCAAGAATGGGGTAGTAGAGAAGATGACATACCCTGGAAGCTTCATTGTACCGTGCTCAAT
AGGTGGCATGGATCTTGGTTGTGCACGATGCAATCTAGAAGCAAATATCAACTTAATATTTCTCTCTATCTTCAAGAAATTAGGGATAGGGGAGGTTCAACCTACACAAA
TGGCGTTCCAAATAACTGATAAATCCATCACGCGACCTAAGGGAAAGATCGAAGAGGTGTTGGTTAAGGTGGACAAGTTTTTATTCCACGCATACTTCGTTATTCTGGAC
TTCAAAGCTGATCGGGAGGTTCCTATCATTTTAGGGTGGCCGTTTCTGTCAATAGGTCGTGCCCTTATTAATGTCCACCAAGGGGGAATTGACTATGCGGCTTAA
Protein sequenceShow/hide protein sequence
MNDFETVALTQAICDVFKNGVVEKMTYPGSFIVPCSIGGMDLGCARCNLEANINLIFLSIFKKLGIGEVQPTQMAFQITDKSITRPKGKIEEVLVKVDKFLFHAYFVILD
FKADREVPIILGWPFLSIGRALINVHQGGIDYAA