; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0018027 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0018027
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionHMG-Y-related protein A-like
Genome locationchr06:8847789..8849700
RNA-Seq ExpressionIVF0018027
SyntenyIVF0018027
Gene Ontology termsGO:0006334 - nucleosome assembly (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0016584 - nucleosome positioning (biological process)
GO:0030261 - chromosome condensation (biological process)
GO:0045910 - negative regulation of DNA recombination (biological process)
GO:0000786 - nucleosome (cellular component)
GO:0005730 - nucleolus (cellular component)
GO:0003690 - double-stranded DNA binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
GO:0031492 - nucleosomal DNA binding (molecular function)
InterPro domainsIPR000116 - High mobility group protein HMGA
IPR005818 - Linker histone H1/H5, domain H15
IPR017956 - AT hook, DNA-binding motif
IPR031059 - High mobility group protein HMGA, plant
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004145857.1 HMG-Y-related protein A isoform X2 [Cucumis sativus]2.50e-11898.33Show/hide
Query:  MATQEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGDLVFWKNNYMKRDPTAPPRRGRGRPPKSKSPLP
        MATQEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGDLVFWKNNYMKRDPTAPPRRGRGRPPKSKSPLP
Subjt:  MATQEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGDLVFWKNNYMKRDPTAPPRRGRGRPPKSKSPLP

Query:  LSSAISPPKPRGRPPKDPNAPPKPPKPVQMKVSSGTGKPRGRPRKFPQSATTPAPPAPSGRPRGRPPKVKATLTEVSVQQ
        LSS IS PKPRGRPPKDPNAPPKPPKPVQMKVSSGTGKPRGRPRKFPQSA+TPAPPAPSGRPRGRPPKVKATLTEVSVQQ
Subjt:  LSSAISPPKPRGRPPKDPNAPPKPPKPVQMKVSSGTGKPRGRPRKFPQSATTPAPPAPSGRPRGRPPKVKATLTEVSVQQ

XP_008456999.1 PREDICTED: HMG-Y-related protein A-like [Cucumis melo]9.12e-121100Show/hide
Query:  MATQEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGDLVFWKNNYMKRDPTAPPRRGRGRPPKSKSPLP
        MATQEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGDLVFWKNNYMKRDPTAPPRRGRGRPPKSKSPLP
Subjt:  MATQEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGDLVFWKNNYMKRDPTAPPRRGRGRPPKSKSPLP

Query:  LSSAISPPKPRGRPPKDPNAPPKPPKPVQMKVSSGTGKPRGRPRKFPQSATTPAPPAPSGRPRGRPPKVKATLTEVSVQQ
        LSSAISPPKPRGRPPKDPNAPPKPPKPVQMKVSSGTGKPRGRPRKFPQSATTPAPPAPSGRPRGRPPKVKATLTEVSVQQ
Subjt:  LSSAISPPKPRGRPPKDPNAPPKPPKPVQMKVSSGTGKPRGRPRKFPQSATTPAPPAPSGRPRGRPPKVKATLTEVSVQQ

XP_022935331.1 HMG-Y-related protein A-like [Cucurbita moschata]6.29e-10890.16Show/hide
Query:  MATQEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGDLVFWKNNYMKRDPTAPPRRGRGRPPKSKSPLP
        MA +EVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASG+LVFWKNNYMKRDPTAPPRRGRGRPPK K PLP
Subjt:  MATQEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGDLVFWKNNYMKRDPTAPPRRGRGRPPKSKSPLP

Query:  LSSAISPPKPRGRPPKDPNAPPKPPKP---VQMKVSSGTGKPRGRPRKFPQSATTPAPPAPSGRPRGRPPKVKATLTEVSVQQ
          S +SPPKPRGRPPKDPNAPPKPPKP   VQMKVSSGTGKPRGRPRKFP+ AT PAPP PSGRPRGRPPKVK  LTEVSVQQ
Subjt:  LSSAISPPKPRGRPPKDPNAPPKPPKP---VQMKVSSGTGKPRGRPRKFPQSATTPAPPAPSGRPRGRPPKVKATLTEVSVQQ

XP_031739266.1 HMG-Y-related protein A isoform X1 [Cucumis sativus]5.67e-11490.31Show/hide
Query:  MATQEVNKPPSLPPYPE----------------MIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGDLVFWKNNYMKRDPTAP
        MATQEVNKPPSLPPYPE                MIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGDLVFWKNNYMKRDPTAP
Subjt:  MATQEVNKPPSLPPYPE----------------MIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGDLVFWKNNYMKRDPTAP

Query:  PRRGRGRPPKSKSPLPLSSAISPPKPRGRPPKDPNAPPKPPKPVQMKVSSGTGKPRGRPRKFPQSATTPAPPAPSGRPRGRPPKVKATLTEVSVQQ
        PRRGRGRPPKSKSPLPLSS IS PKPRGRPPKDPNAPPKPPKPVQMKVSSGTGKPRGRPRKFPQSA+TPAPPAPSGRPRGRPPKVKATLTEVSVQQ
Subjt:  PRRGRGRPPKSKSPLPLSSAISPPKPRGRPPKDPNAPPKPPKPVQMKVSSGTGKPRGRPRKFPQSATTPAPPAPSGRPRGRPPKVKATLTEVSVQQ

XP_038878302.1 HMG-Y-related protein A-like [Benincasa hispida]3.43e-10990.56Show/hide
Query:  MATQEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGDLVFWKNNYMKRDPTAPPRRGRGRPPKSKSPLP
        MAT+EVNKPPSLPPYPEMIFRAIEALNS+NGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASG+LVFWKNNYMKRDPTAPPRRGRGRPPK K PLP
Subjt:  MATQEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGDLVFWKNNYMKRDPTAPPRRGRGRPPKSKSPLP

Query:  LSSAISPPKPRGRPPKDPNAPPKPPKPVQMKVSSGTGKPRGRPRKFPQSATTPAPPAPSGRPRGRPPKVKATLTEVSVQQ
         SS +SPPKPRGRPPKDPNAPPKPPKPVQMKVSSGTGK RGRPRKFP + T P+PP PSGRPRGRPPKVK +LTEVSVQQ
Subjt:  LSSAISPPKPRGRPPKDPNAPPKPPKPVQMKVSSGTGKPRGRPRKFPQSATTPAPPAPSGRPRGRPPKVKATLTEVSVQQ

TrEMBL top hitse value%identityAlignment
A0A0A0LCH9 H15 domain-containing protein6.2e-9298.33Show/hide
Query:  MATQEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGDLVFWKNNYMKRDPTAPPRRGRGRPPKSKSPLP
        MATQEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGDLVFWKNNYMKRDPTAPPRRGRGRPPKSKSPLP
Subjt:  MATQEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGDLVFWKNNYMKRDPTAPPRRGRGRPPKSKSPLP

Query:  LSSAISPPKPRGRPPKDPNAPPKPPKPVQMKVSSGTGKPRGRPRKFPQSATTPAPPAPSGRPRGRPPKVKATLTEVSVQQ
        LSS IS PKPRGRPPKDPNAPPKPPKPVQMKVSSGTGKPRGRPRKFPQSA+TPAPPAPSGRPRGRPPKVKATLTEVSVQQ
Subjt:  LSSAISPPKPRGRPPKDPNAPPKPPKPVQMKVSSGTGKPRGRPRKFPQSATTPAPPAPSGRPRGRPPKVKATLTEVSVQQ

A0A1S3C432 HMG-Y-related protein A-like8.7e-94100Show/hide
Query:  MATQEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGDLVFWKNNYMKRDPTAPPRRGRGRPPKSKSPLP
        MATQEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGDLVFWKNNYMKRDPTAPPRRGRGRPPKSKSPLP
Subjt:  MATQEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGDLVFWKNNYMKRDPTAPPRRGRGRPPKSKSPLP

Query:  LSSAISPPKPRGRPPKDPNAPPKPPKPVQMKVSSGTGKPRGRPRKFPQSATTPAPPAPSGRPRGRPPKVKATLTEVSVQQ
        LSSAISPPKPRGRPPKDPNAPPKPPKPVQMKVSSGTGKPRGRPRKFPQSATTPAPPAPSGRPRGRPPKVKATLTEVSVQQ
Subjt:  LSSAISPPKPRGRPPKDPNAPPKPPKPVQMKVSSGTGKPRGRPRKFPQSATTPAPPAPSGRPRGRPPKVKATLTEVSVQQ

A0A5D3DJY3 HMG-Y-related protein A-like8.7e-94100Show/hide
Query:  MATQEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGDLVFWKNNYMKRDPTAPPRRGRGRPPKSKSPLP
        MATQEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGDLVFWKNNYMKRDPTAPPRRGRGRPPKSKSPLP
Subjt:  MATQEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGDLVFWKNNYMKRDPTAPPRRGRGRPPKSKSPLP

Query:  LSSAISPPKPRGRPPKDPNAPPKPPKPVQMKVSSGTGKPRGRPRKFPQSATTPAPPAPSGRPRGRPPKVKATLTEVSVQQ
        LSSAISPPKPRGRPPKDPNAPPKPPKPVQMKVSSGTGKPRGRPRKFPQSATTPAPPAPSGRPRGRPPKVKATLTEVSVQQ
Subjt:  LSSAISPPKPRGRPPKDPNAPPKPPKPVQMKVSSGTGKPRGRPRKFPQSATTPAPPAPSGRPRGRPPKVKATLTEVSVQQ

A0A6J1F494 HMG-Y-related protein A-like4.8e-8490.16Show/hide
Query:  MATQEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGDLVFWKNNYMKRDPTAPPRRGRGRPPKSKSPLP
        MA +EVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASG+LVFWKNNYMKRDPTAPPRRGRGRPPK K PLP
Subjt:  MATQEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGDLVFWKNNYMKRDPTAPPRRGRGRPPKSKSPLP

Query:  LSSAISPPKPRGRPPKDPNA---PPKPPKPVQMKVSSGTGKPRGRPRKFPQSATTPAPPAPSGRPRGRPPKVKATLTEVSVQQ
          S +SPPKPRGRPPKDPNA   PPKPPKPVQMKVSSGTGKPRGRPRKFP+ AT PAPP PSGRPRGRPPKVK  LTEVSVQQ
Subjt:  LSSAISPPKPRGRPPKDPNA---PPKPPKPVQMKVSSGTGKPRGRPRKFPQSATTPAPPAPSGRPRGRPPKVKATLTEVSVQQ

A0A6J1J6G8 HMG-Y-related protein A-like4.8e-8490.16Show/hide
Query:  MATQEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGDLVFWKNNYMKRDPTAPPRRGRGRPPKSKSPLP
        MA +EVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASG+LVFWKNNYMKRDPTAPPRRGRGRPPK K PLP
Subjt:  MATQEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGDLVFWKNNYMKRDPTAPPRRGRGRPPKSKSPLP

Query:  LSSAISPPKPRGRPPKDPNA---PPKPPKPVQMKVSSGTGKPRGRPRKFPQSATTPAPPAPSGRPRGRPPKVKATLTEVSVQQ
          S +SPPKPRGRPPKDPNA   PPKPPKPVQMKVSSGTGKPRGRPRKFP+ AT PAPP PSGRPRGRPPKVK  LTEVSVQQ
Subjt:  LSSAISPPKPRGRPPKDPNA---PPKPPKPVQMKVSSGTGKPRGRPRKFPQSATTPAPPAPSGRPRGRPPKVKATLTEVSVQQ

SwissProt top hitse value%identityAlignment
Q00423 HMG-Y-related protein A3.7e-5767.22Show/hide
Query:  MATQEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGDLVFWKNNYMKRDPTAPPRRGRGRPPKSKSPLP
        MAT+EVNKP SLPPYPEMI + +EALN  NGSNKS ISKYIE+TYG LP   +++L  HLN MK SG+L F +NNYMK DP APP+RGRGRPPK K+PLP
Subjt:  MATQEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGDLVFWKNNYMKRDPTAPPRRGRGRPPKSKSPLP

Query:  LSSAISPPKPRGRPPKDPNAPPKPPKPVQMKVSSGTGKPRGRPRKFPQSATTPAPPA-PSGRPRGRPPKVKATLTEVSVQ
          + +SPP+PRGRPPKDPNAPPK PK    K + G+G+PRGRP+K P+S    AP A  SGRPRGRPPKVK  LTEVSV+
Subjt:  LSSAISPPKPRGRPPKDPNAPPKPPKPVQMKVSSGTGKPRGRPRKFPQSATTPAPPA-PSGRPRGRPPKVKATLTEVSVQ

Q10370 HMG-Y-related protein B (Fragment)6.1e-4464.74Show/hide
Query:  ALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGDLVFWKNNYMKRDPTAPPRRGRGRPPKSKSPLPLSSAISPPKPRGRPPKDPNAPPKP
        ALN  +GSNKS ISKYIE+TYG LP    ++L  HLN MK SG+L F +NNYMK DP APP+RGRGRPPK K PLP  + +SPP+PRGRPPKDPNAPPK 
Subjt:  ALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGDLVFWKNNYMKRDPTAPPRRGRGRPPKSKSPLPLSSAISPPKPRGRPPKDPNAPPKP

Query:  PKPVQMKVSSGTGKPRGRPRKFPQSATTPAPPAPS-GRPRGRPPKVKATLTEVSVQ
        PK    K +  TG+PRGRP+K  +S   P+P A S GRPRGRPPKVK  LTEVSV+
Subjt:  PKPVQMKVSSGTGKPRGRPRKFPQSATTPAPPAPS-GRPRGRPPKVKATLTEVSVQ

Q43386 HMG-Y-related protein A3.6e-3651.93Show/hide
Query:  SLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGDLVFWKNNYMKRDPTAPPRRGRGRPPKSKSPLPLSSAIS----
        SLPPYP+MI  AIE+LN  NG NK+TI+K+IEST   LP  H +LL++HLN MK +G L+  KNNYMK DP APP+RGRGRPPK K+     +A +    
Subjt:  SLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGDLVFWKNNYMKRDPTAPPRRGRGRPPKSKSPLPLSSAIS----

Query:  -------PPKPRGRPPKDPNAPPKPPKPVQMKVSSGTGKPRGRPRKFPQS-ATTPAPPAPSG------RPRGRPPKVKATL
               PP+ RGRPPK    P  P +P Q KV +G+G+PRGRP K P++ + T A P P+       R RGRPPKVK T+
Subjt:  -------PPKPRGRPPKDPNAPPKPPKPVQMKVSSGTGKPRGRPRKFPQS-ATTPAPPAPSG------RPRGRPPKVKATL

Q9FYS5 HMG-Y-related protein A2.8e-3351.08Show/hide
Query:  MATQEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGDLVFWKNNYMKRD-PTAPPRRGRGRPPKSKSPL
        MAT E  KP  +PPYPEMI  AIE L+  +GSNKS ISKYIE  YG+LP  H+SLLT HL  MK SG+LVF KNNY +   P APP+RGRGRPPK++ P 
Subjt:  MATQEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGDLVFWKNNYMKRD-PTAPPRRGRGRPPKSKSPL

Query:  PLSSAISPPKPRGRPPKDPNAPPKPPKPVQMKV---SSGTGKPRGRPRKFPQS--ATTPAP---PAPSG-------RPRGRPPKVK
          + A   P   GR       PPK   P++  V   ++G  KPRGRP K  ++  A +P+P   PAP+G       R RGRPPKV+
Subjt:  PLSSAISPPKPRGRPPKDPNAPPKPPKPVQMKV---SSGTGKPRGRPRKFPQS--ATTPAP---PAPSG-------RPRGRPPKVK

Arabidopsis top hitse value%identityAlignment
AT1G14900.1 high mobility group A2.5e-3751.93Show/hide
Query:  SLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGDLVFWKNNYMKRDPTAPPRRGRGRPPKSKSPLPLSSAIS----
        SLPPYP+MI  AIE+LN  NG NK+TI+K+IEST   LP  H +LL++HLN MK +G L+  KNNYMK DP APP+RGRGRPPK K+     +A +    
Subjt:  SLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGDLVFWKNNYMKRDPTAPPRRGRGRPPKSKSPLPLSSAIS----

Query:  -------PPKPRGRPPKDPNAPPKPPKPVQMKVSSGTGKPRGRPRKFPQS-ATTPAPPAPSG------RPRGRPPKVKATL
               PP+ RGRPPK    P  P +P Q KV +G+G+PRGRP K P++ + T A P P+       R RGRPPKVK T+
Subjt:  -------PPKPRGRPPKDPNAPPKPPKPVQMKVSSGTGKPRGRPRKFPQS-ATTPAPPAPSG------RPRGRPPKVKATL

AT1G48620.1 high mobility group A51.8e-1435.29Show/hide
Query:  TQEVNKPPSL--PPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGDLVFWKNNY-MKRDPTAPP--------------
        T  V   PS+  PPY +MI  AI ALN  +GS+K  IS+YIE  Y  +PT H +LLTHHL  +K SG LV  K +Y +   P  PP              
Subjt:  TQEVNKPPSL--PPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGDLVFWKNNY-MKRDPTAPP--------------

Query:  ----------------------RRGRGRPPKSK----SPLPLSSA----ISPPKPRGRPPKDPNAPPKPPKPVQMKVSSGTGKPRGRPRKFPQSATTPAP
                              +RGRGRPPK+K     P PL++          P  RP +    PP+ P   Q  V     +P GRPRK   S T    
Subjt:  ----------------------RRGRGRPPKSK----SPLPLSSA----ISPPKPRGRPPKDPNAPPKPPKPVQMKVSSGTGKPRGRPRKFPQSATTPAP

Query:  PAPSG-----RPRGRPPKVKA
         + SG     + RGRPP  +A
Subjt:  PAPSG-----RPRGRPPKVKA

AT3G18035.1 winged-helix DNA-binding transcription factor family protein7.0e-1133.48Show/hide
Query:  KPFFFQFSMATQEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGDLVFWKNNY----------------
        +P  FQ S     V+ P   PPY EMI  AI ALN  +GS+K  IS+YIE  Y  L + H++LLTHHL  +K SG L   K +Y                
Subjt:  KPFFFQFSMATQEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGDLVFWKNNY----------------

Query:  -----------------MKRDPTA------PPRRGRGRPPKSK---SPLPLSSAISPP----KPRGRP---PKDPNAPPKPPKPVQMKVSSGTGKPRGRP
                            DP A      P +RGRGRPPK K    P PL     PP    +  G+P    +   +P   P PV      G G+PR   
Subjt:  -----------------MKRDPTA------PPRRGRGRPPKSK---SPLPLSSAISPP----KPRGRP---PKDPNAPPKPPKPVQMKVSSGTGKPRGRP

Query:  RKFPQSATTPAPPAPSG--RPRGRPPKVKA
           P +A        +G  + RGRPP  +A
Subjt:  RKFPQSATTPAPPAPSG--RPRGRPPKVKA

AT5G08780.1 winged-helix DNA-binding transcription factor family protein4.2e-0838.57Show/hide
Query:  VNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGDLVFWKNN
        +++ P  P Y  MIF AI  LN + G+++  IS++I+S Y NLP  H++LL+HHL  +    +++   NN
Subjt:  VNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGDLVFWKNN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGGGGAAGAACAGAAATTACTCAAAATCCCCTGTTTGCAAATCTGTGCTCAAATCAAACAGTTAACAGAGCATTTTTTTTTTTGGAACAGCAGTAGTAGGTTCCT
CTTTCTATCTCTAGCTGCTTTCTGGGTTACTCTTCCCCTTCTCTGTAGGCTTCAGGATAATAAAAAACCTTTCTTTTTTCAATTTTCAATGGCGACTCAAGAGGTTAATA
AACCTCCATCACTCCCTCCTTACCCTGAGATGATATTTAGGGCTATTGAAGCGTTGAATAGTGACAATGGCTCGAACAAGTCCACAATATCAAAGTACATTGAATCGACA
TATGGGAACTTGCCAACTGGGCACTCATCTTTGCTCACACACCATTTGAACATGATGAAAGCGAGTGGGGACCTTGTGTTCTGGAAGAACAACTACATGAAGAGGGATCC
TACGGCACCTCCCCGACGAGGTCGTGGCAGGCCTCCCAAATCGAAGAGCCCTCTTCCACTCAGTTCTGCAATATCCCCACCAAAGCCGAGAGGCCGCCCGCCTAAGGACC
CCAATGCACCTCCAAAACCACCAAAGCCAGTGCAGATGAAGGTATCTTCTGGGACTGGAAAACCAAGAGGACGACCAAGGAAATTCCCTCAGTCAGCAACCACGCCAGCT
CCTCCGGCACCAAGTGGGAGGCCCAGAGGTCGACCTCCTAAGGTGAAGGCTACATTGACGGAAGTTAGTGTTCAACAATAG
mRNA sequenceShow/hide mRNA sequence
GAAAAAGAAAAAGAAAAGAAAAAAATAAAATAAATAAAAAAAATGAAAGGGGAAGAACAGAAATTACTCAAAATCCCCTGTTTGCAAATCTGTGCTCAAATCAAACAGTT
AACAGAGCATTTTTTTTTTTGGAACAGCAGTAGTAGGTTCCTCTTTCTATCTCTAGCTGCTTTCTGGGTTACTCTTCCCCTTCTCTGTAGGCTTCAGGATAATAAAAAAC
CTTTCTTTTTTCAATTTTCAATGGCGACTCAAGAGGTTAATAAACCTCCATCACTCCCTCCTTACCCTGAGATGATATTTAGGGCTATTGAAGCGTTGAATAGTGACAAT
GGCTCGAACAAGTCCACAATATCAAAGTACATTGAATCGACATATGGGAACTTGCCAACTGGGCACTCATCTTTGCTCACACACCATTTGAACATGATGAAAGCGAGTGG
GGACCTTGTGTTCTGGAAGAACAACTACATGAAGAGGGATCCTACGGCACCTCCCCGACGAGGTCGTGGCAGGCCTCCCAAATCGAAGAGCCCTCTTCCACTCAGTTCTG
CAATATCCCCACCAAAGCCGAGAGGCCGCCCGCCTAAGGACCCCAATGCACCTCCAAAACCACCAAAGCCAGTGCAGATGAAGGTATCTTCTGGGACTGGAAAACCAAGA
GGACGACCAAGGAAATTCCCTCAGTCAGCAACCACGCCAGCTCCTCCGGCACCAAGTGGGAGGCCCAGAGGTCGACCTCCTAAGGTGAAGGCTACATTGACGGAAGTTAG
TGTTCAACAATAGATTGTTGCAGTGCAGTTAATTGGTAGTGCCTTGACTCTCCCTCTCTCTCACTCTCTTATTTGTCTCTCTGTTGCTGTGTGGGCAGTTTGTAGTTGTA
GTGCTTAGTTTTAGTTTGATGTGGATGTGGGTGTAATTCATGTAAAATGTGGTGTAGTGGTTTGTGAGGCTCTGTTGCTTTCTAATTTACAAAGTGAACATTGACCTGTG
CTAATCATAATTTCTTCAGTGTTTCGATCCTTCAAACATTTTTCAATGCTTCAAACATG
Protein sequenceShow/hide protein sequence
MKGEEQKLLKIPCLQICAQIKQLTEHFFFWNSSSRFLFLSLAAFWVTLPLLCRLQDNKKPFFFQFSMATQEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIEST
YGNLPTGHSSLLTHHLNMMKASGDLVFWKNNYMKRDPTAPPRRGRGRPPKSKSPLPLSSAISPPKPRGRPPKDPNAPPKPPKPVQMKVSSGTGKPRGRPRKFPQSATTPA
PPAPSGRPRGRPPKVKATLTEVSVQQ