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IVF0018028 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0018028
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGibberellin regulated protein
Genome locationchr01:701624..702691
RNA-Seq ExpressionIVF0018028
SyntenyIVF0018028
Gene Ontology termsNA
InterPro domainsIPR003854 - Gibberellin regulated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8008067.1 hypothetical protein FH972_004614 [Carpinus fangiana]6.05e-2257.47Show/hide
Query:  QLLLLGLFFCFLLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVP-GSYG-KHHCPCYSHVHTIRGRAKCP
        +LL   L  C LLLS+SF++  MA S  CT  C  RCSKA +K RCMKYC ICC +CKCVP G+YG KH CPCY      +G+AKCP
Subjt:  QLLLLGLFFCFLLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVP-GSYG-KHHCPCYSHVHTIRGRAKCP

KAG6588701.1 Snakin-1, partial [Cucurbita argyrosperma subsp. sororia]5.54e-3783.58Show/hide
Query:  MDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVPGSYGKHHCPCYSHVHTIRGRAKCP
        M+TAMA +D CTRPCRKRCS AKLKR+CMK+CRICC KCKCVPG+YGK HCPCYSHVHT+RGRAKCP
Subjt:  MDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVPGSYGKHHCPCYSHVHTIRGRAKCP

KAG7022485.1 Snakin-1 [Cucurbita argyrosperma subsp. argyrosperma]8.65e-4780.68Show/hide
Query:  MRTQLLLLGLFFCFLLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVPGSYGKHHCPCYSHVHTIRGRAKCP
        MR Q+L++G F CFLLLSASFM+TAMA +D CTRPCRKRCS AKLKR+CMK+CRICC KCKCVPG+YGK HCPCYSHVHT+RGRAKCP
Subjt:  MRTQLLLLGLFFCFLLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVPGSYGKHHCPCYSHVHTIRGRAKCP

XP_016499410.1 PREDICTED: peamaclein-like [Nicotiana tabacum]6.22e-2257.89Show/hide
Query:  LLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVP-GSYG-KHHCPCYSHVHTIRGRAKCP
        LLL++SF++TA A S  C R C+ RCSKA +K RC+KYC +CC+KCKCVP G+YG KH CPCY  +   +G+ KCP
Subjt:  LLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVP-GSYG-KHHCPCYSHVHTIRGRAKCP

XP_021683427.1 snakin-1-like [Hevea brasiliensis]4.26e-2256.79Show/hide
Query:  LFFCFLLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVP-GSYG-KHHCPCYSHVHTIRGRAKCP
        L  C LLLS+SF++ AMA S  CT+ C+ RC+KA +K RC+KYC ICC++CKCVP G+YG KH CPCY      +G+ KCP
Subjt:  LFFCFLLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVP-GSYG-KHHCPCYSHVHTIRGRAKCP

TrEMBL top hitse value%identityAlignment
A0A0A0K2Z1 Uncharacterized protein1.6e-4296.59Show/hide
Query:  MRTQLLLLGLFFCFLLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVPGSYGKHHCPCYSHVHTIRGRAKCP
        MRT LLLLGLFFCFLLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVPG YGK HCPCYSHVHTIRGRAKCP
Subjt:  MRTQLLLLGLFFCFLLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVPGSYGKHHCPCYSHVHTIRGRAKCP

A0A1S4CE27 peamaclein-like1.5e-1657.89Show/hide
Query:  LLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVP-GSYG-KHHCPCYSHVHTIRGRAKCP
        LLL++SF++TA A S  C R C+ RCSKA +K RC+KYC +CC+KCKCVP G+YG KH CPCY  +   +G+ KCP
Subjt:  LLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVP-GSYG-KHHCPCYSHVHTIRGRAKCP

A0A2I0KSA4 peamaclein-like3.4e-1652.94Show/hide
Query:  LLLGLFFCFLLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVP-GSYG-KHHCPCYSHVHTIRGRAKCP
        LL  +  C  LLS++FM+  MA S  CT+ C +RC KA +K RC+KYC ICC++CKCVP G+YG KH CPCY      +G+ KCP
Subjt:  LLLGLFFCFLLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVP-GSYG-KHHCPCYSHVHTIRGRAKCP

A0A5D3E0A6 Peamaclein-like5.8e-1652.87Show/hide
Query:  QLLLLGLFFCFLLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVP-GSYG-KHHCPCYSHVHTIRGRAKCP
        +L       CFLL ++SF+DT  A    C + C+KRCS+A +K RCMKYC ICC  CKCVP G+YG KH CPCY  + + +GR KCP
Subjt:  QLLLLGLFFCFLLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVP-GSYG-KHHCPCYSHVHTIRGRAKCP

A0A5N6QLL9 Uncharacterized protein1.2e-1657.47Show/hide
Query:  QLLLLGLFFCFLLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVP-GSYG-KHHCPCYSHVHTIRGRAKCP
        +LL   L  C LLLS+SF++  MA S  CT  C  RCSKA +K RCMKYC ICC +CKCVP G+YG KH CPCY      +G+AKCP
Subjt:  QLLLLGLFFCFLLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVP-GSYG-KHHCPCYSHVHTIRGRAKCP

SwissProt top hitse value%identityAlignment
C0HLQ1 Cypmaclein3.2e-1152.54Show/hide
Query:  CTRPCRKRCSKAKLKRRCMKYCRICCSKCKCV-PGSYG-KHHCPCYSHVHTIRGRAKCP
        C + C +RCSKA    RC+KYC ICC KC CV PG+YG +  CPCY+++   +G  KCP
Subjt:  CTRPCRKRCSKAKLKRRCMKYCRICCSKCKCV-PGSYG-KHHCPCYSHVHTIRGRAKCP

O80641 Gibberellin-regulated protein 83.8e-1245.98Show/hide
Query:  QLLLLGLFFCFLLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVP-GSYG-KHHCPCYSHVHTIRGRAKCP
        +L+++  F   LLL++SF   + ADS  C   C  RCSKA     C+KYC ICC KC CVP G++G K  CPCY  +   +G +KCP
Subjt:  QLLLLGLFFCFLLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVP-GSYG-KHHCPCYSHVHTIRGRAKCP

P86888 Peamaclein7.1e-1153.23Show/hide
Query:  SDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVP-GSYG-KHHCPCYSHVHTIRGRAKCP
        S  C   C  RCSKA  + RC+KYC ICC KC CVP G+YG K  CPCY  +   +G  KCP
Subjt:  SDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVP-GSYG-KHHCPCYSHVHTIRGRAKCP

Q8LFM2 Gibberellin-regulated protein 103.8e-1249.35Show/hide
Query:  LLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCK-CVP-GSYG-KHHCPCYSHVHTIRGRAKCP
        LL+++S    + ADS  C   C  RCSKA  + RC+KYC ICC KC  CVP G+YG K  CPCY  +   +G +KCP
Subjt:  LLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCK-CVP-GSYG-KHHCPCYSHVHTIRGRAKCP

Q948Z4 Snakin-15.6e-1650.57Show/hide
Query:  QLLLLGLFFCFLLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVP-GSYG-KHHCPCYSHVHTIRGRAKCP
        +L LL L    L+++ S + T MA S  C   C+ RCSKA L  RC+KYC ICC +CKCVP G+YG KH CPCY      +G++KCP
Subjt:  QLLLLGLFFCFLLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVP-GSYG-KHHCPCYSHVHTIRGRAKCP

Arabidopsis top hitse value%identityAlignment
AT1G74670.1 Gibberellin-regulated family protein8.0e-1039.58Show/hide
Query:  TQLLLLGLFFCFLLLSAS--------FMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCV-PGSYG-KHHCPCYSHVHTIRGRAKCP
        T  LLL + F F+ L+ S                S +C   C +RCS  K  + CM +C+ CC+KC CV PG+YG K  CPCY++  T +G  KCP
Subjt:  TQLLLLGLFFCFLLLSAS--------FMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCV-PGSYG-KHHCPCYSHVHTIRGRAKCP

AT2G14900.1 Gibberellin-regulated family protein5.6e-1150.85Show/hide
Query:  CTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVP-GSYG-KHHCPCYSHVHTIRGRAKCP
        C + C  RC +A +K RC+KYC ICC  C+CVP G+YG KH C CY    + +G  KCP
Subjt:  CTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVP-GSYG-KHHCPCYSHVHTIRGRAKCP

AT2G39540.1 Gibberellin-regulated family protein2.7e-1345.98Show/hide
Query:  QLLLLGLFFCFLLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVP-GSYG-KHHCPCYSHVHTIRGRAKCP
        +L+++  F   LLL++SF   + ADS  C   C  RCSKA     C+KYC ICC KC CVP G++G K  CPCY  +   +G +KCP
Subjt:  QLLLLGLFFCFLLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVP-GSYG-KHHCPCYSHVHTIRGRAKCP

AT4G09610.1 GAST1 protein homolog 21.4e-0947.46Show/hide
Query:  CTRPCRKRCSKAKLKRRCMKYCRICCSKCKCV-PGSYGKHH-CPCYSHVHTIRGRAKCP
        C   C+ RCSK+   + C++ C  CCS+C CV PG+ G  H CPCY+ + T  GR KCP
Subjt:  CTRPCRKRCSKAKLKRRCMKYCRICCSKCKCV-PGSYGKHH-CPCYSHVHTIRGRAKCP

AT5G59845.1 Gibberellin-regulated family protein2.7e-1349.35Show/hide
Query:  LLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCK-CVP-GSYG-KHHCPCYSHVHTIRGRAKCP
        LL+++S    + ADS  C   C  RCSKA  + RC+KYC ICC KC  CVP G+YG K  CPCY  +   +G +KCP
Subjt:  LLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCK-CVP-GSYG-KHHCPCYSHVHTIRGRAKCP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAACTCAGCTTTTGCTTCTTGGTTTGTTCTTCTGTTTCCTTCTCTTAAGTGCTTCTTTCATGGACACTGCCATGGCTGATTCAGACCGGTGCACGAGACCGTGTAG
GAAGAGGTGTTCGAAAGCGAAGCTGAAGCGTCGGTGCATGAAGTATTGTAGAATATGTTGCAGCAAATGTAAATGTGTGCCAGGGAGTTATGGGAAGCACCATTGCCCTT
GCTATAGCCATGTTCACACCATTAGAGGCAGGGCCAAATGCCCTTAA
mRNA sequenceShow/hide mRNA sequence
GTTTTAAAAAGCACTTATTCTTCAAACTCCTCCTCTGTTGAGAAGAAACAAATCTGAGGTTTCATTTCTCTCATCTGAAAGATCAAAACACAATGAGAACTCAGCTTTTG
CTTCTTGGTTTGTTCTTCTGTTTCCTTCTCTTAAGTGCTTCTTTCATGGACACTGCCATGGCTGATTCAGACCGGTGCACGAGACCGTGTAGGAAGAGGTGTTCGAAAGC
GAAGCTGAAGCGTCGGTGCATGAAGTATTGTAGAATATGTTGCAGCAAATGTAAATGTGTGCCAGGGAGTTATGGGAAGCACCATTGCCCTTGCTATAGCCATGTTCACA
CCATTAGAGGCAGGGCCAAATGCCCTTAAACTTTTAAGAGACCGTTTGCATTTATTGTCTGTCCCTTATTATTATGAAATCAAATAATATAAGCCAACCTAAAATAGTAC
TATAGAAATGAAATGAGACCAAAATAATTTTGTGTCTGATATGAATATTAAATGCTTCAAAGTTTGAATTGTGAGATTTGGTGTGCTTTTT
Protein sequenceShow/hide protein sequence
MRTQLLLLGLFFCFLLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVPGSYGKHHCPCYSHVHTIRGRAKCP