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IVF0018077 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0018077
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr05:18438123..18438311
RNA-Seq ExpressionIVF0018077
SyntenyIVF0018077
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039592.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]4.87e-2385.48Show/hide
Query:  MVDIMVEAAMAEMERKINLLMKVVEERDHKITALRDQMRTRETVESSKTLLVKADNKEKVVL
        MVDI VEAAMAEMERKINLLMKV+EERDH+ITALRDQMRTR+T ESSKT  VKAD+KEK VL
Subjt:  MVDIMVEAAMAEMERKINLLMKVVEERDHKITALRDQMRTRETVESSKTLLVKADNKEKVVL

KAA0048247.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]5.09e-2079.03Show/hide
Query:  MVDIMVEAAMAEMERKINLLMKVVEERDHKITALRDQMRTRETVESSKTLLVKADNKEKVVL
        MVDI VEAAMAEMERK+N LMKVVEERDHKITAL +QMRTRET ESS+TL+VKA +K K V+
Subjt:  MVDIMVEAAMAEMERKINLLMKVVEERDHKITALRDQMRTRETVESSKTLLVKADNKEKVVL

KAA0048603.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]7.71e-1875.81Show/hide
Query:  MVDIMVEAAMAEMERKINLLMKVVEERDHKITALRDQMRTRETVESSKTLLVKADNKEKVVL
        M DI  EAAMAEMERKIN LMKVVEERDH+ITALR+QMRTRET ESS+T +VKA +K K V+
Subjt:  MVDIMVEAAMAEMERKINLLMKVVEERDHKITALRDQMRTRETVESSKTLLVKADNKEKVVL

KAA0048735.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]2.88e-1875Show/hide
Query:  DIMVEAAMAEMERKINLLMKVVEERDHKITALRDQMRTRETVESSKTLLVKADNKEKVVL
        D+ +E  +AEMERKIN LMKVVEER+H+IT LRDQMRT ET ESSKT LVKAD+KEK VL
Subjt:  DIMVEAAMAEMERKINLLMKVVEERDHKITALRDQMRTRETVESSKTLLVKADNKEKVVL

TYK25898.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]5.39e-1978.33Show/hide
Query:  DIMVEAAMAEMERKINLLMKVVEERDHKITALRDQMRTRETVESSKTLLVKADNKEKVVL
        DIMVEAAM EMER INLLMKVVEER+H+I+ALRDQMRT ET ES+KT + KAD+KEK VL
Subjt:  DIMVEAAMAEMERKINLLMKVVEERDHKITALRDQMRTRETVESSKTLLVKADNKEKVVL

TrEMBL top hitse value%identityAlignment
A0A5A7T802 Ty3-gypsy retrotransposon protein1.1e-1685.48Show/hide
Query:  MVDIMVEAAMAEMERKINLLMKVVEERDHKITALRDQMRTRETVESSKTLLVKADNKEKVVL
        MVDI VEAAMAEMERKINLLMKV+EERDH+ITALRDQMRTR+T ESSKT  VKAD+KEK VL
Subjt:  MVDIMVEAAMAEMERKINLLMKVVEERDHKITALRDQMRTRETVESSKTLLVKADNKEKVVL

A0A5A7TYE9 Ty3-gypsy retrotransposon protein9.4e-1375.81Show/hide
Query:  MVDIMVEAAMAEMERKINLLMKVVEERDHKITALRDQMRTRETVESSKTLLVKADNKEKVVL
        M DI  EAAMAEMERKIN LMKVVEERDH+ITALR+QMRTRET ESS+T +VKA +K K V+
Subjt:  MVDIMVEAAMAEMERKINLLMKVVEERDHKITALRDQMRTRETVESSKTLLVKADNKEKVVL

A0A5A7U1Y2 Ty3-gypsy retrotransposon protein5.0e-1479.03Show/hide
Query:  MVDIMVEAAMAEMERKINLLMKVVEERDHKITALRDQMRTRETVESSKTLLVKADNKEKVVL
        MVDI VEAAMAEMERK+N LMKVVEERDHKITAL +QMRTRET ESS+TL+VKA +K K V+
Subjt:  MVDIMVEAAMAEMERKINLLMKVVEERDHKITALRDQMRTRETVESSKTLLVKADNKEKVVL

A0A5D3DEZ5 Ty3-gypsy retrotransposon protein9.4e-1372.58Show/hide
Query:  MVDIMVEAAMAEMERKINLLMKVVEERDHKITALRDQMRTRETVESSKTLLVKADNKEKVVL
        M D+ VEA MAEMERKIN LMKVVEERDH+I  L+DQM+  ET+ESSKT +VKADNK K VL
Subjt:  MVDIMVEAAMAEMERKINLLMKVVEERDHKITALRDQMRTRETVESSKTLLVKADNKEKVVL

A0A5D3DQS8 Ty3-gypsy retrotransposon protein1.9e-1375.81Show/hide
Query:  MVDIMVEAAMAEMERKINLLMKVVEERDHKITALRDQMRTRETVESSKTLLVKADNKEKVVL
        + DIMVEAAM EMER INLLMKVVEER+H+I+ALRDQMRT ET ES+KT + KAD+KEK VL
Subjt:  MVDIMVEAAMAEMERKINLLMKVVEERDHKITALRDQMRTRETVESSKTLLVKADNKEKVVL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGATATAATGGTCGAGGCTGCCATGGCGGAGATGGAAAGAAAAATTAACCTCTTGATGAAGGTTGTGGAGGAACGAGACCACAAAATCACAGCTTTGAGAGACCA
GATGCGGACTCGTGAAACTGTTGAGTCAAGCAAAACTCTTCTAGTCAAAGCTGACAATAAAGAAAAAGTTGTGTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTGATATAATGGTCGAGGCTGCCATGGCGGAGATGGAAAGAAAAATTAACCTCTTGATGAAGGTTGTGGAGGAACGAGACCACAAAATCACAGCTTTGAGAGACCA
GATGCGGACTCGTGAAACTGTTGAGTCAAGCAAAACTCTTCTAGTCAAAGCTGACAATAAAGAAAAAGTTGTGTTGTAG
Protein sequenceShow/hide protein sequence
MVDIMVEAAMAEMERKINLLMKVVEERDHKITALRDQMRTRETVESSKTLLVKADNKEKVVL