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IVF0018105 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0018105
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag/pol protein
Genome locationchr04:21869692..21870057
RNA-Seq ExpressionIVF0018105
SyntenyIVF0018105
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0005840 - ribosome (cellular component)
GO:0016020 - membrane (cellular component)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026022.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa]3.68e-3576.83Show/hide
Query:  MLPHTFSQGIGWEASSLKGELMCDPKRSKRWPMLPTSGEHSSGFKNHWKCTYSKGNGLSSSTSSVRPQKTRARMAPTRFSRP
        MLP  FS GIG EA+SL+GEL CDPKRSKRWPMLPTSGE SSGF+NHWKCT S+GNGLSS TS  RP+KTRA M  T+FSRP
Subjt:  MLPHTFSQGIGWEASSLKGELMCDPKRSKRWPMLPTSGEHSSGFKNHWKCTYSKGNGLSSSTSSVRPQKTRARMAPTRFSRP

KAA0035524.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]2.55e-2971.08Show/hide
Query:  MLPHTFSQGIGWEASSLKGELMCDPKRSKRWPMLPTSGEHSSGFKNHWKCTYSKGNGLSSSTSSVRPQKTRARMAPTRFSRPL
        MLP TFSQGIG +ASSL+GE  CDPK+SK WPMLPT  + SSG KNHWKCT  + N LSS TSSVRP+KTRARM  T+FSRP+
Subjt:  MLPHTFSQGIGWEASSLKGELMCDPKRSKRWPMLPTSGEHSSGFKNHWKCTYSKGNGLSSSTSSVRPQKTRARMAPTRFSRPL

KAA0061317.1 hypothetical protein E6C27_scaffold6213G00130 [Cucumis melo var. makuwa]2.02e-2969.41Show/hide
Query:  MLPHTFSQGIGWEASSLKGELMCDPKRSKRWPMLPTSGEHSSGFKNHWKCTYSKGNGLSSSTSSVRPQKTRARMAPTRFSRPLGK
        MLPH F+QGIG EASSL+GEL  DPKR KRWPML TSGE  SG +NHWKCT S  N LSS TS V P KTR RM+ T+FSRP  K
Subjt:  MLPHTFSQGIGWEASSLKGELMCDPKRSKRWPMLPTSGEHSSGFKNHWKCTYSKGNGLSSSTSSVRPQKTRARMAPTRFSRPLGK

KAA0066117.1 mitochondrial intermembrane space import and assembly protein 40 [Cucumis melo var. makuwa]1.09e-3275.61Show/hide
Query:  MLPHTFSQGIGWEASSLKGELMCDPKRSKRWPMLPTSGEHSSGFKNHWKCTYSKGNGLSSSTSSVRPQKTRARMAPTRFSRP
        MLP TFS GIG EASSL+GEL CDPKRSKRWP LPTSGE SSG +NHWKCT S+GNGLSS TS  RP+KT A M  T+FSRP
Subjt:  MLPHTFSQGIGWEASSLKGELMCDPKRSKRWPMLPTSGEHSSGFKNHWKCTYSKGNGLSSSTSSVRPQKTRARMAPTRFSRP

TYK22521.1 uncharacterized protein E5676_scaffold387G00220 [Cucumis melo var. makuwa]2.80e-2878.57Show/hide
Query:  MLPHTFSQGIGWEASSLKGELMCDPKRSKRWPMLPTSGEHSSGFKNHWKCTYSKGNGLSSSTSSVRPQKT
        MLP TFS GIG EASSL+GEL+CDPK SKRWPMLPT GE SSGF+NHWKCT S+GNGLSS TS  RP+KT
Subjt:  MLPHTFSQGIGWEASSLKGELMCDPKRSKRWPMLPTSGEHSSGFKNHWKCTYSKGNGLSSSTSSVRPQKT

TrEMBL top hitse value%identityAlignment
A0A5A7SLK2 Retrovirus-related Pol polyprotein from transposon 17.62.0e-2776.83Show/hide
Query:  MLPHTFSQGIGWEASSLKGELMCDPKRSKRWPMLPTSGEHSSGFKNHWKCTYSKGNGLSSSTSSVRPQKTRARMAPTRFSRP
        MLP  FS GIG EA+SL+GEL CDPKRSKRWPMLPTSGE SSGF+NHWKCT S+GNGLSS TS  RP+KTRA M  T+FSRP
Subjt:  MLPHTFSQGIGWEASSLKGELMCDPKRSKRWPMLPTSGEHSSGFKNHWKCTYSKGNGLSSSTSSVRPQKTRARMAPTRFSRP

A0A5A7V368 Uncharacterized protein3.0e-2369.41Show/hide
Query:  MLPHTFSQGIGWEASSLKGELMCDPKRSKRWPMLPTSGEHSSGFKNHWKCTYSKGNGLSSSTSSVRPQKTRARMAPTRFSRPLGK
        MLPH F+QGIG EASSL+GEL  DPKR KRWPML TSGE  SG +NHWKCT S  N LSS TS V P KTR RM+ T+FSRP  K
Subjt:  MLPHTFSQGIGWEASSLKGELMCDPKRSKRWPMLPTSGEHSSGFKNHWKCTYSKGNGLSSSTSSVRPQKTRARMAPTRFSRPLGK

A0A5A7VGB1 Mitochondrial intermembrane space import and assembly protein 403.8e-2675.61Show/hide
Query:  MLPHTFSQGIGWEASSLKGELMCDPKRSKRWPMLPTSGEHSSGFKNHWKCTYSKGNGLSSSTSSVRPQKTRARMAPTRFSRP
        MLP TFS GIG EASSL+GEL CDPKRSKRWP LPTSGE SSG +NHWKCT S+GNGLSS TS  RP+KT A M  T+FSRP
Subjt:  MLPHTFSQGIGWEASSLKGELMCDPKRSKRWPMLPTSGEHSSGFKNHWKCTYSKGNGLSSSTSSVRPQKTRARMAPTRFSRP

A0A5D3DFP2 Uncharacterized protein1.0e-2378.57Show/hide
Query:  MLPHTFSQGIGWEASSLKGELMCDPKRSKRWPMLPTSGEHSSGFKNHWKCTYSKGNGLSSSTSSVRPQKT
        MLP TFS GIG EASSL+GEL+CDPK SKRWPMLPT GE SSGF+NHWKCT S+GNGLSS TS  RP+KT
Subjt:  MLPHTFSQGIGWEASSLKGELMCDPKRSKRWPMLPTSGEHSSGFKNHWKCTYSKGNGLSSSTSSVRPQKT

A0A5D3E5W4 NBS-LRR type resistance protein8.0e-2471.08Show/hide
Query:  MLPHTFSQGIGWEASSLKGELMCDPKRSKRWPMLPTSGEHSSGFKNHWKCTYSKGNGLSSSTSSVRPQKTRARMAPTRFSRPL
        MLP TFSQGIG +ASSL+GE  CDPK+SK WPMLPT  + SSG KNHWKCT  + N LSS TSSVRP+KTRARM  T+FSRP+
Subjt:  MLPHTFSQGIGWEASSLKGELMCDPKRSKRWPMLPTSGEHSSGFKNHWKCTYSKGNGLSSSTSSVRPQKTRARMAPTRFSRPL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCCCTCATACGTTTTCTCAAGGTATAGGTTGGGAAGCGAGCTCCTTGAAGGGAGAACTGATGTGCGACCCAAAACGATCCAAAAGATGGCCAATGCTTCCAACGAG
TGGCGAACACTCGTCCGGTTTCAAAAATCATTGGAAATGCACTTACAGCAAAGGAAATGGGCTGAGCTCGAGTACTTCTAGTGTTCGTCCCCAGAAAACGCGAGCGAGAA
TGGCCCCGACTCGGTTTTCTCGTCCATTGGGCAAATACCGATCCTCCTACGATTTTTTCCCTTTGCTGCGTATAGGTCATAAGTCTTTTGATCTTCAGGGCTCGTACTCC
GAGGACTTCAACCTACACTCCTGGCATGCTCTATGA
mRNA sequenceShow/hide mRNA sequence
ATGCTCCCTCATACGTTTTCTCAAGGTATAGGTTGGGAAGCGAGCTCCTTGAAGGGAGAACTGATGTGCGACCCAAAACGATCCAAAAGATGGCCAATGCTTCCAACGAG
TGGCGAACACTCGTCCGGTTTCAAAAATCATTGGAAATGCACTTACAGCAAAGGAAATGGGCTGAGCTCGAGTACTTCTAGTGTTCGTCCCCAGAAAACGCGAGCGAGAA
TGGCCCCGACTCGGTTTTCTCGTCCATTGGGCAAATACCGATCCTCCTACGATTTTTTCCCTTTGCTGCGTATAGGTCATAAGTCTTTTGATCTTCAGGGCTCGTACTCC
GAGGACTTCAACCTACACTCCTGGCATGCTCTATGA
Protein sequenceShow/hide protein sequence
MLPHTFSQGIGWEASSLKGELMCDPKRSKRWPMLPTSGEHSSGFKNHWKCTYSKGNGLSSSTSSVRPQKTRARMAPTRFSRPLGKYRSSYDFFPLLRIGHKSFDLQGSYS
EDFNLHSWHAL