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IVF0018157 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0018157
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRNase H domain-containing protein
Genome locationchr04:1891163..1891695
RNA-Seq ExpressionIVF0018157
SyntenyIVF0018157
Gene Ontology termsGO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038679.1 hypothetical protein E6C27_scaffold92G002210 [Cucumis melo var. makuwa]2.82e-4083.95Show/hide
Query:  MTSESTRSQKIWMSPYVGFWRFNLDASWNDVEEIT------------FILASCERAEVKWPMEVLEALATNRGLIVYSDYF
        MTSESTRSQKIWMSPYVGFWRFNLDASWNDVEEI+            FILASCERAEVKWPMEVLEALATNRGLIVYSDYF
Subjt:  MTSESTRSQKIWMSPYVGFWRFNLDASWNDVEEIT------------FILASCERAEVKWPMEVLEALATNRGLIVYSDYF
KGN60244.1 hypothetical protein Csa_002227 [Cucumis sativus]1.17e-3558.41Show/hide
Query:  MTSESTRSQKIWMSPYVGFWRFNLDASWNDVEEITFILASCERAEVKWPMEVLEALATNRGLIVYSDYF----------------------------VFF
        MTSES RSQ+IWM+    FW+FNLDASWNDVEEITFILA C R EVKWP EVLEALA  RGL V+SDYF                             FF
Subjt:  MTSESTRSQKIWMSPYVGFWRFNLDASWNDVEEITFILASCERAEVKWPMEVLEALATNRGLIVYSDYF----------------------------VFF

Query:  SKHNDMVRIPCNI
        S+HNDMVRI CNI
Subjt:  SKHNDMVRIPCNI
TrEMBL top hitse value%identityAlignment
A0A0A0LGW5 Uncharacterized protein5.1e-2658.41Show/hide
Query:  MTSESTRSQKIWMSPYVGFWRFNLDASWNDVEEITFILASCERAEVKWPMEVLEALATNRGLIVYSDYF----------------------------VFF
        MTSES RSQ+IWM+    FW+FNLDASWNDVEEITFILA C R EVKWP EVLEALA  RGL V+SDYF                             FF
Subjt:  MTSESTRSQKIWMSPYVGFWRFNLDASWNDVEEITFILASCERAEVKWPMEVLEALATNRGLIVYSDYF----------------------------VFF

Query:  SKHNDMVRIPCNI
        S+HNDMVRI CNI
Subjt:  SKHNDMVRIPCNI
A0A5D3E6P6 RNase H domain-containing protein1.7e-2983.95Show/hide
Query:  MTSESTRSQKIWMSPYVGFWRFNLDASWNDVEEIT------------FILASCERAEVKWPMEVLEALATNRGLIVYSDYF
        MTSESTRSQKIWMSPYVGFWRFNLDASWNDVEEI+            FILASCERAEVKWPMEVLEALATNRGLIVYSDYF
Subjt:  MTSESTRSQKIWMSPYVGFWRFNLDASWNDVEEIT------------FILASCERAEVKWPMEVLEALATNRGLIVYSDYF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAGTGAGAGCACGAGGAGTCAGAAGATTTGGATGTCGCCTTATGTTGGTTTTTGGAGGTTCAACTTGGATGCTTCTTGGAATGATGTTGAGGAGATCACCTTTAT
CCTGGCTAGTTGTGAGAGAGCGGAGGTTAAATGGCCCATGGAGGTTCTTGAAGCATTAGCCACGAATAGAGGTTTGATTGTATATTCTGATTACTTCGTTTTTTTCTCTA
AACATAATGATATGGTTAGGATCCCTTGTAATATTCCAAGAAGGAGACTCGTAGTGATGGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGACAAGTGAGAGCACGAGGAGTCAGAAGATTTGGATGTCGCCTTATGTTGGTTTTTGGAGGTTCAACTTGGATGCTTCTTGGAATGATGTTGAGGAGATCACCTTTAT
CCTGGCTAGTTGTGAGAGAGCGGAGGTTAAATGGCCCATGGAGGTTCTTGAAGCATTAGCCACGAATAGAGGTTTGATTGTATATTCTGATTACTTCGTTTTTTTCTCTA
AACATAATGATATGGTTAGGATCCCTTGTAATATTCCAAGAAGGAGACTCGTAGTGATGGTGTGA
Protein sequenceShow/hide protein sequence
MTSESTRSQKIWMSPYVGFWRFNLDASWNDVEEITFILASCERAEVKWPMEVLEALATNRGLIVYSDYFVFFSKHNDMVRIPCNIPRRRLVVMV