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IVF0018165 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0018165
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRibosomal protein S10
Genome locationtig00007088:267084..267419
RNA-Seq ExpressionIVF0018165
SyntenyIVF0018165
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001848 - Ribosomal protein S10
IPR027486 - Ribosomal protein S10 domain
IPR036838 - Ribosomal protein S10 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE9584349.1 putative ribosomal protein S10 [Lupinus albus]5.62e-6091.74Show/hide
Query:  MLLINRRGRGVSQKERPPKVTTTKIRIVIRSFDHPFFANHFLGLPPYTRKIGLPESRVHYTVLRSPHIDKKSREQFEMERKIKPMVIKTERHELRKKFFR
        MLLINR GRGVSQKERPPKVTTTKIRIVIRSFDHPFF NHF GLPPYTRKIGLPESRV YTVLRSPHIDKKSREQFEME K K +VIKTE HELRKKFFR
Subjt:  MLLINRRGRGVSQKERPPKVTTTKIRIVIRSFDHPFFANHFLGLPPYTRKIGLPESRVHYTVLRSPHIDKKSREQFEMERKIKPMVIKTERHELRKKFFR

Query:  LKRRATRRT
        LKRRATRRT
Subjt:  LKRRATRRT

KYP31509.1 hypothetical protein KK1_048135 [Cajanus cajan]5.62e-6090.83Show/hide
Query:  MLLINRRGRGVSQKERPPKVTTTKIRIVIRSFDHPFFANHFLGLPPYTRKIGLPESRVHYTVLRSPHIDKKSREQFEMERKIKPMVIKTERHELRKKFFR
        MLLINR GRGVSQKERPPKVTTTKIRIVIRSFDHPFF NHF GLPPYTRKIGLPESRV YTVLRSPHIDKKSREQFEME K K ++IKTE+HELRKKFFR
Subjt:  MLLINRRGRGVSQKERPPKVTTTKIRIVIRSFDHPFFANHFLGLPPYTRKIGLPESRVHYTVLRSPHIDKKSREQFEMERKIKPMVIKTERHELRKKFFR

Query:  LKRRATRRT
        LKRRATRRT
Subjt:  LKRRATRRT

QCQ81915.1 ribosomal protein S10 [Ammopiptanthus mongolicus]4.62e-5990.83Show/hide
Query:  MLLINRRGRGVSQKERPPKVTTTKIRIVIRSFDHPFFANHFLGLPPYTRKIGLPESRVHYTVLRSPHIDKKSREQFEMERKIKPMVIKTERHELRKKFFR
        MLLINR GRGVSQKERPPKVTTTKIRIVIRSFDHPF  NHF GLPPYTRKIGLPESRV YTVLRSPHIDKKSREQFEME K K +VIKTE HELRKKFFR
Subjt:  MLLINRRGRGVSQKERPPKVTTTKIRIVIRSFDHPFFANHFLGLPPYTRKIGLPESRVHYTVLRSPHIDKKSREQFEMERKIKPMVIKTERHELRKKFFR

Query:  LKRRATRRT
        LKRRATRRT
Subjt:  LKRRATRRT

YP_009675547.1 ribosomal protein S10 [Sophora flavescens]8.44e-5889.91Show/hide
Query:  MLLINRRGRGVSQKERPPKVTTTKIRIVIRSFDHPFFANHFLGLPPYTRKIGLPESRVHYTVLRSPHIDKKSREQFEMERKIKPMVIKTERHELRKKFFR
        MLLINR GRGVSQKERPPKVTTTKIRIVIRSFDHPF  N+F GLPPYTRKIGLPESRV YTVLRSPHIDKKSREQFEME K K +VIKTE HELRKKFFR
Subjt:  MLLINRRGRGVSQKERPPKVTTTKIRIVIRSFDHPFFANHFLGLPPYTRKIGLPESRVHYTVLRSPHIDKKSREQFEMERKIKPMVIKTERHELRKKFFR

Query:  LKRRATRRT
        LKRRATRRT
Subjt:  LKRRATRRT

YP_009935535.1 ribosomal protein S10 [Sapindus mukorossi]1.33e-5890.83Show/hide
Query:  MLLINRRGRGVSQKERPPKVTTTKIRIVIRSFDHPFFANHFLGLPPYTRKIGLPESRVHYTVLRSPHIDKKSREQFEMERKIKPMVIKTERHELRKKFFR
        MLLINR GRGVSQKERPPKVTTTKIRIVIRSFDHPF  N FLGLPPYTRKIGLPESRV YTVLRSPHIDKKSREQFEME K + +VIKTERHELRKKFFR
Subjt:  MLLINRRGRGVSQKERPPKVTTTKIRIVIRSFDHPFFANHFLGLPPYTRKIGLPESRVHYTVLRSPHIDKKSREQFEMERKIKPMVIKTERHELRKKFFR

Query:  LKRRATRRT
        LKRRATRRT
Subjt:  LKRRATRRT

TrEMBL top hitse value%identityAlignment
A0A151UHR2 Ribosomal_S10 domain-containing protein8.9e-4690.83Show/hide
Query:  MLLINRRGRGVSQKERPPKVTTTKIRIVIRSFDHPFFANHFLGLPPYTRKIGLPESRVHYTVLRSPHIDKKSREQFEMERKIKPMVIKTERHELRKKFFR
        MLLINR GRGVSQKERPPKVTTTKIRIVIRSFDHPFF NHF GLPPYTRKIGLPESRV YTVLRSPHIDKKSREQFEME K K ++IKTE+HELRKKFFR
Subjt:  MLLINRRGRGVSQKERPPKVTTTKIRIVIRSFDHPFFANHFLGLPPYTRKIGLPESRVHYTVLRSPHIDKKSREQFEMERKIKPMVIKTERHELRKKFFR

Query:  LKRRATRRT
        LKRRATRRT
Subjt:  LKRRATRRT

A0A1J7GJX4 Ribosomal_S10 domain-containing protein8.9e-4691.74Show/hide
Query:  MLLINRRGRGVSQKERPPKVTTTKIRIVIRSFDHPFFANHFLGLPPYTRKIGLPESRVHYTVLRSPHIDKKSREQFEMERKIKPMVIKTERHELRKKFFR
        MLLINR GRGVSQKERPPKVTTTKIRIVIRSFDHPFF NHF GLPPYTRKIGLPESRV YTVLRSPHIDKKSREQFEME K K +VIKTE HELRKKFFR
Subjt:  MLLINRRGRGVSQKERPPKVTTTKIRIVIRSFDHPFFANHFLGLPPYTRKIGLPESRVHYTVLRSPHIDKKSREQFEMERKIKPMVIKTERHELRKKFFR

Query:  LKRRATRRT
        LKRRATRRT
Subjt:  LKRRATRRT

A0A4P8PG71 Ribosomal protein S104.4e-4590.83Show/hide
Query:  MLLINRRGRGVSQKERPPKVTTTKIRIVIRSFDHPFFANHFLGLPPYTRKIGLPESRVHYTVLRSPHIDKKSREQFEMERKIKPMVIKTERHELRKKFFR
        MLLINR GRGVSQKERPPKVTTTKIRIVIRSFDHPF  NHF GLPPYTRKIGLPESRV YTVLRSPHIDKKSREQFEME K K +VIKTE HELRKKFFR
Subjt:  MLLINRRGRGVSQKERPPKVTTTKIRIVIRSFDHPFFANHFLGLPPYTRKIGLPESRVHYTVLRSPHIDKKSREQFEMERKIKPMVIKTERHELRKKFFR

Query:  LKRRATRRT
        LKRRATRRT
Subjt:  LKRRATRRT

A0A6A5L2R1 Putative ribosomal protein S108.9e-4691.74Show/hide
Query:  MLLINRRGRGVSQKERPPKVTTTKIRIVIRSFDHPFFANHFLGLPPYTRKIGLPESRVHYTVLRSPHIDKKSREQFEMERKIKPMVIKTERHELRKKFFR
        MLLINR GRGVSQKERPPKVTTTKIRIVIRSFDHPFF NHF GLPPYTRKIGLPESRV YTVLRSPHIDKKSREQFEME K K +VIKTE HELRKKFFR
Subjt:  MLLINRRGRGVSQKERPPKVTTTKIRIVIRSFDHPFFANHFLGLPPYTRKIGLPESRVHYTVLRSPHIDKKSREQFEMERKIKPMVIKTERHELRKKFFR

Query:  LKRRATRRT
        LKRRATRRT
Subjt:  LKRRATRRT

A0A7H1CQT7 Ribosomal protein S109.8e-4590.83Show/hide
Query:  MLLINRRGRGVSQKERPPKVTTTKIRIVIRSFDHPFFANHFLGLPPYTRKIGLPESRVHYTVLRSPHIDKKSREQFEMERKIKPMVIKTERHELRKKFFR
        MLLINR GRGVSQKERPPKVTTTKIRIVIRSFDHPF  N FLGLPPYTRKIGLPESRV YTVLRSPHIDKKSREQFEME K + +VIKTERHELRKKFFR
Subjt:  MLLINRRGRGVSQKERPPKVTTTKIRIVIRSFDHPFFANHFLGLPPYTRKIGLPESRVHYTVLRSPHIDKKSREQFEMERKIKPMVIKTERHELRKKFFR

Query:  LKRRATRRT
        LKRRATRRT
Subjt:  LKRRATRRT

SwissProt top hitse value%identityAlignment
O50185 30S ribosomal protein S101.2e-0437.66Show/hide
Query:  VTTTKIRIVIRSFDHPFFANHFLGLPPYTRKIG--------LPESRVHYTVLRSPHIDKKSREQFEMERKIKPMVIK
        + TT I+I ++SFDH         +    R++         LP SR  YT+LRS HI+KKSREQFE     + +++K
Subjt:  VTTTKIRIVIRSFDHPFFANHFLGLPPYTRKIG--------LPESRVHYTVLRSPHIDKKSREQFEMERKIKPMVIK

P26869 Ribosomal protein S10, mitochondrial1.9e-1358.02Show/hide
Query:  TTKIRIVIRSFDHPFFANHFLGLPPYTRKIGLPESRVHYTVLRSPHIDKKSREQFEMERKIKPMVIKTERHELRKKFFRLK
        T KI IVI+SF+     N   GL   TRKIGLP+ +  YTVLRSPHIDKKSREQFEM    + +VI+TE H+LR+K   LK
Subjt:  TTKIRIVIRSFDHPFFANHFLGLPPYTRKIGLPESRVHYTVLRSPHIDKKSREQFEMERKIKPMVIKTERHELRKKFFRLK

P42797 40S ribosomal protein S10, mitochondrial2.2e-1755.56Show/hide
Query:  KERPPKVTTTKIRIVIRSFDHPFFANHFLGLPPYTRKIGLPESRVHYTVLRSPHIDKKSREQFEMERKIKPMVIKTERHELRKKFFRLKR
        +E   K+  TKI I IRSF +P        LPP+TRK+ +P++R  YTVLRSPH+DKKSREQFEM  K + +VIK + HEL KK F LKR
Subjt:  KERPPKVTTTKIRIVIRSFDHPFFANHFLGLPPYTRKIGLPESRVHYTVLRSPHIDKKSREQFEMERKIKPMVIKTERHELRKKFFRLKR

P51428 Ribosomal protein S10, mitochondrial1.6e-3185.54Show/hide
Query:  TTKIRIVIRSFDHPFFANHFLGLPPYTRKIGLPESRVHYTVLRSPHIDKKSREQFEMERKIKPMVIKTERHELRKKFFRLKRR
        TTKIRIVIRSFDHPF  NHF GLPPYT KIGLPESRV YTVLRSPHIDKKSREQFEME K K +VIKTE+HELRKKFF LKR+
Subjt:  TTKIRIVIRSFDHPFFANHFLGLPPYTRKIGLPESRVHYTVLRSPHIDKKSREQFEMERKIKPMVIKTERHELRKKFFRLKRR

Q4A8H0 30S ribosomal protein S101.2e-0437.66Show/hide
Query:  VTTTKIRIVIRSFDHPFFANHFLGLPPYTRKIG--------LPESRVHYTVLRSPHIDKKSREQFEMERKIKPMVIK
        + TT I+I ++SFDH         +    R++         LP SR  YT+LRS HI+KKSREQFE     + +++K
Subjt:  VTTTKIRIVIRSFDHPFFANHFLGLPPYTRKIG--------LPESRVHYTVLRSPHIDKKSREQFEMERKIKPMVIK

Arabidopsis top hitse value%identityAlignment
AT3G22300.1 ribosomal protein S101.6e-1855.56Show/hide
Query:  KERPPKVTTTKIRIVIRSFDHPFFANHFLGLPPYTRKIGLPESRVHYTVLRSPHIDKKSREQFEMERKIKPMVIKTERHELRKKFFRLKR
        +E   K+  TKI I IRSF +P        LPP+TRK+ +P++R  YTVLRSPH+DKKSREQFEM  K + +VIK + HEL KK F LKR
Subjt:  KERPPKVTTTKIRIVIRSFDHPFFANHFLGLPPYTRKIGLPESRVHYTVLRSPHIDKKSREQFEMERKIKPMVIKTERHELRKKFFRLKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCTGATCAATAGAAGAGGAAGAGGAGTAAGCCAAAAAGAAAGACCACCAAAAGTCACGACCACCAAGATACGCATAGTGATTCGATCTTTTGATCACCCATTTTT
TGCAAACCATTTTTTGGGGCTTCCGCCTTACACACGGAAGATTGGATTGCCTGAATCACGAGTCCACTATACTGTGTTACGATCACCTCATATTGATAAAAAGTCCAGAG
AACAATTTGAAATGGAAAGAAAGATCAAGCCTATGGTCATAAAAACAGAAAGGCATGAATTGCGCAAGAAGTTCTTTCGGTTAAAACGCCGTGCGACTCGGAGGACATCA
GACTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTCTGATCAATAGAAGAGGAAGAGGAGTAAGCCAAAAAGAAAGACCACCAAAAGTCACGACCACCAAGATACGCATAGTGATTCGATCTTTTGATCACCCATTTTT
TGCAAACCATTTTTTGGGGCTTCCGCCTTACACACGGAAGATTGGATTGCCTGAATCACGAGTCCACTATACTGTGTTACGATCACCTCATATTGATAAAAAGTCCAGAG
AACAATTTGAAATGGAAAGAAAGATCAAGCCTATGGTCATAAAAACAGAAAGGCATGAATTGCGCAAGAAGTTCTTTCGGTTAAAACGCCGTGCGACTCGGAGGACATCA
GACTGA
Protein sequenceShow/hide protein sequence
MLLINRRGRGVSQKERPPKVTTTKIRIVIRSFDHPFFANHFLGLPPYTRKIGLPESRVHYTVLRSPHIDKKSREQFEMERKIKPMVIKTERHELRKKFFRLKRRATRRTS
D