; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0018179 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0018179
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionCell wall protein RBR3-like
Genome locationchr12:4109940..4110728
RNA-Seq ExpressionIVF0018179
SyntenyIVF0018179
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056755.1 cell wall protein RBR3-like [Cucumis melo var. makuwa]7.14e-15387.83Show/hide
Query:  MVNTRREKYQVRSTSIGSEDDSSRTNMHDVRIRGYQFKTTPSRRPYRLPSKQNQVSPSDPTKDSLFSDPVDSVVPENVGHHESDLSDMDPNKRDNVPLFH
        MVNTRREKYQVRSTSIGSEDDSSRTNMHDVRIRGYQFKTTPSRRPYRLPSKQNQVSPSDPTKDSLFSDPVDSVVPENVGHHESDLSDMDPNKRDNVPLFH
Subjt:  MVNTRREKYQVRSTSIGSEDDSSRTNMHDVRIRGYQFKTTPSRRPYRLPSKQNQVSPSDPTKDSLFSDPVDSVVPENVGHHESDLSDMDPNKRDNVPLFH

Query:  ILKRGVFGKNTQLDSDVPCASSVVSSPSGHFVSLHFTSSSSNNDIPASNEPHHSSDNLSQCPDNVDQESNPTHVEPESIPASDNRAPENPSEVQELDQEN
        ILKRGVFGKNTQLDSDVPCASSVVSSPSGHFVSLHFTSSSSNNDIPASNEPHHSSDNLSQCPDNVDQESNPTHVEPESIPASDNRAPE+PSEVQELDQEN
Subjt:  ILKRGVFGKNTQLDSDVPCASSVVSSPSGHFVSLHFTSSSSNNDIPASNEPHHSSDNLSQCPDNVDQESNPTHVEPESIPASDNRAPENPSEVQELDQEN

Query:  EASRDIPNPISDMGEDHPQKKVGRPQLVQKTLLQKLDVVNYPQMFLCSHRWNI-IPLKESVQR
        EASRDIPNPISDMGEDHPQKK  +     K +  K      P          I   LKESVQR
Subjt:  EASRDIPNPISDMGEDHPQKKVGRPQLVQKTLLQKLDVVNYPQMFLCSHRWNI-IPLKESVQR

KAA0060681.1 F5J5.1 [Cucumis melo var. makuwa]2.99e-6262.16Show/hide
Query:  VNTRREKYQVRSTSIGSEDDSSRTNMHDVRIRGYQFKTTPSRRPYRLPSKQNQVSPSDPTKDSLFSDPVDSVVPENVGHHESDLSDMDPNKRDNVPLFHI
        VNTRR KYQVRSTS+GSEDDSSR NMH V                         SP DPTK+SLF +PVDS+V +NVGH+ES++SDMD N+ D+VPL HI
Subjt:  VNTRREKYQVRSTSIGSEDDSSRTNMHDVRIRGYQFKTTPSRRPYRLPSKQNQVSPSDPTKDSLFSDPVDSVVPENVGHHESDLSDMDPNKRDNVPLFHI

Query:  LKRGVFGKNTQLDSDVPCASSVVSSPSGHFVSLHFTSSSSNNDIPASNEPHHSSDNLSQCPDNVDQESNPTHVEPESIPASDNRA
        LK+ VFGKNTQLDS VP AS+++ S SGH VSLH +SSSS N++PASN PHHSSDN  Q  DNVDQESNP HVEPES+  S++RA
Subjt:  LKRGVFGKNTQLDSDVPCASSVVSSPSGHFVSLHFTSSSSNNDIPASNEPHHSSDNLSQCPDNVDQESNPTHVEPESIPASDNRA

TYK02589.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.13e-4054.94Show/hide
Query:  GYQFKTTPSRRPYRLPSKQNQVSPSDPTKDSLFSDPVDSVVPENVGHHESDLSDMDPNKRDNVPLFHILKRGVFGKNTQLDSDVPCASSVVSSPSGHFVS
        G  FK+TP + PYRL  ++NQ+   DPTK+SL  DP+D  VPEN G  E +  DMD +++D+V L H+LK  VFGKNTQ +S  P AS+ V  PSG  VS
Subjt:  GYQFKTTPSRRPYRLPSKQNQVSPSDPTKDSLFSDPVDSVVPENVGHHESDLSDMDPNKRDNVPLFHILKRGVFGKNTQLDSDVPCASSVVSSPSGHFVS

Query:  LHFTSSSSNNDIPASNEPHHSSDNLSQCPDNVDQESNPTHVEPESIPASDNRAPENPSEVQE
        L   S++S  D+PASN+P+HS DN SQ  DNVDQESNP HVEP+S   SDNRA E  ++V E
Subjt:  LHFTSSSSNNDIPASNEPHHSSDNLSQCPDNVDQESNPTHVEPESIPASDNRAPENPSEVQE

TYK03313.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.02e-6362.9Show/hide
Query:  MVNTRREKYQVRSTSIGSEDDSSRTNMHDVRIRGYQFKTTPSRRPYRLPSKQNQVSPSDPTKDSLFSDPVDSVVPENVGHHESDLSDMDPNKRDNVPLFH
        +VNTRR KYQVRSTS+GSEDDSSR NMH V                         SP DPTK+SLFS+PVDS+V +NVGH+ES++SDMD N+ D+VPL H
Subjt:  MVNTRREKYQVRSTSIGSEDDSSRTNMHDVRIRGYQFKTTPSRRPYRLPSKQNQVSPSDPTKDSLFSDPVDSVVPENVGHHESDLSDMDPNKRDNVPLFH

Query:  ILKRGVFGKNTQLDSDVPCASSVVSSPSGHFVSLHFTSSSSNNDIPASNEPHHSSDNLSQCPDNVDQESNPTHVEPESIPASDNRA
        ILK+ VFGK+TQLDS VP AS+++ S SGH VSLHF+SSSS N++PASN PHHSSDN SQ  DNVDQESNP HVEPES+  S++RA
Subjt:  ILKRGVFGKNTQLDSDVPCASSVVSSPSGHFVSLHFTSSSSNNDIPASNEPHHSSDNLSQCPDNVDQESNPTHVEPESIPASDNRA

TYK27163.1 cell wall protein RBR3-like [Cucumis melo var. makuwa]4.70e-4947.23Show/hide
Query:  MVNTRREKYQVRSTSIGSEDDSSRTNMHDVRIRGYQFKTTPSRRPYRLPSKQNQVSPSDPTKDSLFSDPVDSVVPENVGHHESDLSDMDPNKRDNVPLFH
        MVNTRR KYQV  T IGSEDDSS TNMH+VR+R  +FKTTP  RPYRLPS++N                             S+LS+MD ++RD+VPL +
Subjt:  MVNTRREKYQVRSTSIGSEDDSSRTNMHDVRIRGYQFKTTPSRRPYRLPSKQNQVSPSDPTKDSLFSDPVDSVVPENVGHHESDLSDMDPNKRDNVPLFH

Query:  ILKRGVFGKNTQLDSDVPCASSVVSSPSGHFVSLHFTSSSSNNDIPASNEPHHSSDNLSQCPDNVDQESNPTHVEPESIPASDNRAPENPSEVQELDQEN
        ILKRGVFGKN Q DS VP  S+VV SPS +                         +NLSQ   N+DQ SN +HV+PES+P S+N   E+  EVQE ++ N
Subjt:  ILKRGVFGKNTQLDSDVPCASSVVSSPSGHFVSLHFTSSSSNNDIPASNEPHHSSDNLSQCPDNVDQESNPTHVEPESIPASDNRAPENPSEVQELDQEN

Query:  EASRDIPNPISDMGEDHPQKKVGRPQLVQKTLLQK
        EASRDI +P+SD+GED PQKK  +     K +  K
Subjt:  EASRDIPNPISDMGEDHPQKKVGRPQLVQKTLLQK

TrEMBL top hitse value%identityAlignment
A0A5A7UT97 Cell wall protein RBR3-like1.4e-11887.83Show/hide
Query:  MVNTRREKYQVRSTSIGSEDDSSRTNMHDVRIRGYQFKTTPSRRPYRLPSKQNQVSPSDPTKDSLFSDPVDSVVPENVGHHESDLSDMDPNKRDNVPLFH
        MVNTRREKYQVRSTSIGSEDDSSRTNMHDVRIRGYQFKTTPSRRPYRLPSKQNQVSPSDPTKDSLFSDPVDSVVPENVGHHESDLSDMDPNKRDNVPLFH
Subjt:  MVNTRREKYQVRSTSIGSEDDSSRTNMHDVRIRGYQFKTTPSRRPYRLPSKQNQVSPSDPTKDSLFSDPVDSVVPENVGHHESDLSDMDPNKRDNVPLFH

Query:  ILKRGVFGKNTQLDSDVPCASSVVSSPSGHFVSLHFTSSSSNNDIPASNEPHHSSDNLSQCPDNVDQESNPTHVEPESIPASDNRAPENPSEVQELDQEN
        ILKRGVFGKNTQLDSDVPCASSVVSSPSGHFVSLHFTSSSSNNDIPASNEPHHSSDNLSQCPDNVDQESNPTHVEPESIPASDNRAPE+PSEVQELDQEN
Subjt:  ILKRGVFGKNTQLDSDVPCASSVVSSPSGHFVSLHFTSSSSNNDIPASNEPHHSSDNLSQCPDNVDQESNPTHVEPESIPASDNRAPENPSEVQELDQEN

Query:  EASRDIPNPISDMGEDHPQKKVGRPQLVQKTLLQKLDVVNYPQMFLCSHRWNI-IPLKESVQR
        EASRDIPNPISDMGEDHPQKK  +     K +  K      P          I   LKESVQR
Subjt:  EASRDIPNPISDMGEDHPQKKVGRPQLVQKTLLQKLDVVNYPQMFLCSHRWNI-IPLKESVQR

A0A5A7V4L4 F5J5.11.4e-4962.16Show/hide
Query:  VNTRREKYQVRSTSIGSEDDSSRTNMHDVRIRGYQFKTTPSRRPYRLPSKQNQVSPSDPTKDSLFSDPVDSVVPENVGHHESDLSDMDPNKRDNVPLFHI
        VNTRR KYQVRSTS+GSEDDSSR NMH                          VSP DPTK+SLF +PVDS+V +NVGH+ES++SDMD N+ D+VPL HI
Subjt:  VNTRREKYQVRSTSIGSEDDSSRTNMHDVRIRGYQFKTTPSRRPYRLPSKQNQVSPSDPTKDSLFSDPVDSVVPENVGHHESDLSDMDPNKRDNVPLFHI

Query:  LKRGVFGKNTQLDSDVPCASSVVSSPSGHFVSLHFTSSSSNNDIPASNEPHHSSDNLSQCPDNVDQESNPTHVEPESIPASDNRA
        LK+ VFGKNTQLDS VP AS+++ S SGH VSLH +SSSS N++PASN PHHSSDN  Q  DNVDQESNP HVEPES+  S++RA
Subjt:  LKRGVFGKNTQLDSDVPCASSVVSSPSGHFVSLHFTSSSSNNDIPASNEPHHSSDNLSQCPDNVDQESNPTHVEPESIPASDNRA

A0A5D3BUG5 Putative mitochondrial protein3.3e-5162.9Show/hide
Query:  MVNTRREKYQVRSTSIGSEDDSSRTNMHDVRIRGYQFKTTPSRRPYRLPSKQNQVSPSDPTKDSLFSDPVDSVVPENVGHHESDLSDMDPNKRDNVPLFH
        +VNTRR KYQVRSTS+GSEDDSSR NMH                          VSP DPTK+SLFS+PVDS+V +NVGH+ES++SDMD N+ D+VPL H
Subjt:  MVNTRREKYQVRSTSIGSEDDSSRTNMHDVRIRGYQFKTTPSRRPYRLPSKQNQVSPSDPTKDSLFSDPVDSVVPENVGHHESDLSDMDPNKRDNVPLFH

Query:  ILKRGVFGKNTQLDSDVPCASSVVSSPSGHFVSLHFTSSSSNNDIPASNEPHHSSDNLSQCPDNVDQESNPTHVEPESIPASDNRA
        ILK+ VFGK+TQLDS VP AS+++ S SGH VSLHF+SSSS N++PASN PHHSSDN SQ  DNVDQESNP HVEPES+  S++RA
Subjt:  ILKRGVFGKNTQLDSDVPCASSVVSSPSGHFVSLHFTSSSSNNDIPASNEPHHSSDNLSQCPDNVDQESNPTHVEPESIPASDNRA

A0A5D3BWS9 Putative mitochondrial protein3.7e-3454.94Show/hide
Query:  GYQFKTTPSRRPYRLPSKQNQVSPSDPTKDSLFSDPVDSVVPENVGHHESDLSDMDPNKRDNVPLFHILKRGVFGKNTQLDSDVPCASSVVSSPSGHFVS
        G  FK+TP + PYRL  ++NQ+   DPTK+SL  DP+D  VPEN G  E +  DMD +++D+V L H+LK  VFGKNTQ +S  P AS+ V  PSG  VS
Subjt:  GYQFKTTPSRRPYRLPSKQNQVSPSDPTKDSLFSDPVDSVVPENVGHHESDLSDMDPNKRDNVPLFHILKRGVFGKNTQLDSDVPCASSVVSSPSGHFVS

Query:  LHFTSSSSNNDIPASNEPHHSSDNLSQCPDNVDQESNPTHVEPESIPASDNRAPENPSEVQE
        L   S++S  D+PASN+P+HS DN SQ  DNVDQESNP HVEP+S   SDNRA E  ++V E
Subjt:  LHFTSSSSNNDIPASNEPHHSSDNLSQCPDNVDQESNPTHVEPESIPASDNRAPENPSEVQE

A0A5D3DU39 Cell wall protein RBR3-like3.8e-3947.23Show/hide
Query:  MVNTRREKYQVRSTSIGSEDDSSRTNMHDVRIRGYQFKTTPSRRPYRLPSKQNQVSPSDPTKDSLFSDPVDSVVPENVGHHESDLSDMDPNKRDNVPLFH
        MVNTRR KYQV  T IGSEDDSS TNMH+VR+R  +FKTTP  RPYRLPS++N                             S+LS+MD ++RD+VPL +
Subjt:  MVNTRREKYQVRSTSIGSEDDSSRTNMHDVRIRGYQFKTTPSRRPYRLPSKQNQVSPSDPTKDSLFSDPVDSVVPENVGHHESDLSDMDPNKRDNVPLFH

Query:  ILKRGVFGKNTQLDSDVPCASSVVSSPSGHFVSLHFTSSSSNNDIPASNEPHHSSDNLSQCPDNVDQESNPTHVEPESIPASDNRAPENPSEVQELDQEN
        ILKRGVFGKN Q DS VP  S+VV SPS                         + +NLSQ   N+DQ SN +HV+PES+P S+N   E+  EVQE ++ N
Subjt:  ILKRGVFGKNTQLDSDVPCASSVVSSPSGHFVSLHFTSSSSNNDIPASNEPHHSSDNLSQCPDNVDQESNPTHVEPESIPASDNRAPENPSEVQELDQEN

Query:  EASRDIPNPISDMGEDHPQKKVGRPQLVQKTLLQK
        EASRDI +P+SD+GED PQKK  +     K +  K
Subjt:  EASRDIPNPISDMGEDHPQKKVGRPQLVQKTLLQK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAAATACTCGTCGTGAGAAGTATCAAGTTCGTTCAACCTCAATTGGTTCTGAAGATGATAGCTCCAGAACAAACATGCATGATGTTCGAATCAGAGGGTATCAATT
CAAAACTACTCCTTCTCGACGTCCTTATCGATTACCATCCAAACAAAATCAGGTATCACCTTCTGATCCCACTAAGGACTCTCTATTTTCTGACCCGGTTGATTCTGTTG
TTCCTGAGAATGTTGGCCACCACGAGTCCGATTTATCTGATATGGACCCAAATAAGAGGGATAATGTACCTCTCTTTCATATTTTGAAGCGCGGAGTGTTTGGCAAAAAT
ACTCAACTAGATAGTGATGTTCCTTGTGCTTCTAGTGTTGTTTCCTCTCCAAGTGGTCACTTTGTATCACTACACTTCACAAGTAGTTCTTCAAATAATGATATTCCCGC
TTCAAATGAACCACATCACTCAAGTGATAATCTATCCCAGTGTCCAGATAATGTTGATCAAGAATCTAATCCAACACATGTTGAGCCAGAATCAATTCCTGCATCTGATA
ATCGTGCACCTGAAAATCCTAGTGAAGTGCAAGAACTTGATCAGGAAAATGAAGCTAGCAGAGATATTCCTAACCCTATATCTGATATGGGTGAGGATCATCCTCAAAAG
AAAGTAGGAAGGCCTCAGCTCGTGCAAAAGACATTACTACAAAAACTGGACGTCGTAAATTACCCCCAAATGTTTCTCTGTTCTCATCGATGGAATATCATTCCCCTTAA
AGAGAGCGTGCAGAGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTAAATACTCGTCGTGAGAAGTATCAAGTTCGTTCAACCTCAATTGGTTCTGAAGATGATAGCTCCAGAACAAACATGCATGATGTTCGAATCAGAGGGTATCAATT
CAAAACTACTCCTTCTCGACGTCCTTATCGATTACCATCCAAACAAAATCAGGTATCACCTTCTGATCCCACTAAGGACTCTCTATTTTCTGACCCGGTTGATTCTGTTG
TTCCTGAGAATGTTGGCCACCACGAGTCCGATTTATCTGATATGGACCCAAATAAGAGGGATAATGTACCTCTCTTTCATATTTTGAAGCGCGGAGTGTTTGGCAAAAAT
ACTCAACTAGATAGTGATGTTCCTTGTGCTTCTAGTGTTGTTTCCTCTCCAAGTGGTCACTTTGTATCACTACACTTCACAAGTAGTTCTTCAAATAATGATATTCCCGC
TTCAAATGAACCACATCACTCAAGTGATAATCTATCCCAGTGTCCAGATAATGTTGATCAAGAATCTAATCCAACACATGTTGAGCCAGAATCAATTCCTGCATCTGATA
ATCGTGCACCTGAAAATCCTAGTGAAGTGCAAGAACTTGATCAGGAAAATGAAGCTAGCAGAGATATTCCTAACCCTATATCTGATATGGGTGAGGATCATCCTCAAAAG
AAAGTAGGAAGGCCTCAGCTCGTGCAAAAGACATTACTACAAAAACTGGACGTCGTAAATTACCCCCAAATGTTTCTCTGTTCTCATCGATGGAATATCATTCCCCTTAA
AGAGAGCGTGCAGAGGTAG
Protein sequenceShow/hide protein sequence
MVNTRREKYQVRSTSIGSEDDSSRTNMHDVRIRGYQFKTTPSRRPYRLPSKQNQVSPSDPTKDSLFSDPVDSVVPENVGHHESDLSDMDPNKRDNVPLFHILKRGVFGKN
TQLDSDVPCASSVVSSPSGHFVSLHFTSSSSNNDIPASNEPHHSSDNLSQCPDNVDQESNPTHVEPESIPASDNRAPENPSEVQELDQENEASRDIPNPISDMGEDHPQK
KVGRPQLVQKTLLQKLDVVNYPQMFLCSHRWNIIPLKESVQR