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IVF0018186 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0018186
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionMediator of RNA polymerase II transcription subunit 2-like
Genome locationtig00000267:331720..333212
RNA-Seq ExpressionIVF0018186
SyntenyIVF0018186
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048973.1 mediator of RNA polymerase II transcription subunit 2-like [Cucumis melo var. makuwa]3.30e-41100Show/hide
Query:  MSKKNSLSRRKKQYEFDLQREKQEKEKAAKKLQAKKNNMKVDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKASQAMDLDK
        MSKKNSLSRRKKQYEFDLQREKQEKEKAAKKLQAKKNNMKVDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKASQAMDLDK
Subjt:  MSKKNSLSRRKKQYEFDLQREKQEKEKAAKKLQAKKNNMKVDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKASQAMDLDK
KGN56523.1 hypothetical protein Csa_010072 [Cucumis sativus]3.18e-3996.3Show/hide
Query:  MSKKNSLSRRKKQYEFDLQREKQEKEKAAKKLQAKKNNMKVDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKASQAMDLDK
        MSKKNSLSRRKKQYEFDLQREKQEKEKAAKKLQAKKN+MKVDGSGKKKKGGGGFQVGKKKVKTKLTA AKAKASQAM+LDK
Subjt:  MSKKNSLSRRKKQYEFDLQREKQEKEKAAKKLQAKKNNMKVDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKASQAMDLDK
XP_022147302.1 uncharacterized protein LOC111016287 [Momordica charantia]5.94e-3588.75Show/hide
Query:  MSKKNSLSRRKKQYEFDLQREKQEKEKAAKKLQAKKNNMKVDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKASQAMDLD
        MSKKN+LSRRKKQ+EFDL+REK E+EKAAKKLQAKKN MKVDGSGK+KKGGGGFQVGKKKVKTKLTAAAKAKA+QAM+LD
Subjt:  MSKKNSLSRRKKQYEFDLQREKQEKEKAAKKLQAKKNNMKVDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKASQAMDLD
XP_022941890.1 uncharacterized protein LOC111447114 [Cucurbita moschata]1.03e-3590.12Show/hide
Query:  MSKKNSLSRRKKQYEFDLQREKQEKEKAAKKLQAKKNNMKVDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKASQAMDLDK
        MSKKN+LSRRK Q+EFDL+REKQEKEKAAKKLQAKKN MKVDGSGKKKKGG GFQVGKKKVKTKLTAAAKAKA+QAM+LDK
Subjt:  MSKKNSLSRRKKQYEFDLQREKQEKEKAAKKLQAKKNNMKVDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKASQAMDLDK
XP_030457135.1 uncharacterized protein LOC115678006 [Syzygium oleosum]4.18e-3588.89Show/hide
Query:  MSKKNSLSRRKKQYEFDLQREKQEKEKAAKKLQAKKNNMKVDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKASQAMDLDK
        MSKKNSLSRRKKQYEFDL+REK EKEKAAKKLQAKKN MKVDGSGKKKKG GGFQVGK+K+KTKLTA AKAKA+QAM+LDK
Subjt:  MSKKNSLSRRKKQYEFDLQREKQEKEKAAKKLQAKKNNMKVDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKASQAMDLDK
TrEMBL top hitse value%identityAlignment
A0A0A0L493 Uncharacterized protein2.7e-2896.3Show/hide
Query:  MSKKNSLSRRKKQYEFDLQREKQEKEKAAKKLQAKKNNMKVDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKASQAMDLDK
        MSKKNSLSRRKKQYEFDLQREKQEKEKAAKKLQAKKN+MKVDGSGKKKKGGGGFQVGKKKVKTKLTA AKAKASQAM+LDK
Subjt:  MSKKNSLSRRKKQYEFDLQREKQEKEKAAKKLQAKKNNMKVDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKASQAMDLDK
A0A5A7TZC8 Mediator of RNA polymerase II transcription subunit 2-like8.5e-30100Show/hide
Query:  MSKKNSLSRRKKQYEFDLQREKQEKEKAAKKLQAKKNNMKVDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKASQAMDLDK
        MSKKNSLSRRKKQYEFDLQREKQEKEKAAKKLQAKKNNMKVDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKASQAMDLDK
Subjt:  MSKKNSLSRRKKQYEFDLQREKQEKEKAAKKLQAKKNNMKVDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKASQAMDLDK
A0A6J1D208 uncharacterized protein LOC1110162874.8e-2587.65Show/hide
Query:  MSKKNSLSRRKKQYEFDLQREKQEKEKAAKKLQAKKNNMKVDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKASQAMDLDK
        MSKKN+LSRRKKQ+EFDL+REK E+EKAAKKLQAKKN MKVDGSGK+KKGGGGFQVGKKKVKTKLTAAAKAKA+QAM+LD+
Subjt:  MSKKNSLSRRKKQYEFDLQREKQEKEKAAKKLQAKKNNMKVDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKASQAMDLDK
A0A6J1FV29 uncharacterized protein LOC1114471141.3e-2590.12Show/hide
Query:  MSKKNSLSRRKKQYEFDLQREKQEKEKAAKKLQAKKNNMKVDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKASQAMDLDK
        MSKKN+LSRRK Q+EFDL+REKQEKEKAAKKLQAKKN MKVDGSGKKKKGG GFQVGKKKVKTKLTAAAKAKA+QAM+LDK
Subjt:  MSKKNSLSRRKKQYEFDLQREKQEKEKAAKKLQAKKNNMKVDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKASQAMDLDK
A0A6J1IED7 uncharacterized protein LOC1114732881.3e-2590.12Show/hide
Query:  MSKKNSLSRRKKQYEFDLQREKQEKEKAAKKLQAKKNNMKVDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKASQAMDLDK
        MSKKN+LSRRK Q+EFDL+REKQEKEKAAKKLQAKKN MKVDGSGKKKKGG GFQVGKKKVKTKLTAAAKAKA+QAM+LDK
Subjt:  MSKKNSLSRRKKQYEFDLQREKQEKEKAAKKLQAKKNNMKVDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKASQAMDLDK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G45860.1 unknown protein1.3e-1970Show/hide
Query:  MSKKNSLSRRKKQYEFDLQREKQEKEKAAKKLQAKKNNMKVDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKASQAMDLD
        MSKKN+L++RKKQ+E++LQ+EK+ ++K  KKL A KN MKVDGSGKKKK  GGF VGKKK+KTKLT  AKAKA+QAM+LD
Subjt:  MSKKNSLSRRKKQYEFDLQREKQEKEKAAKKLQAKKNNMKVDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKASQAMDLD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAAGAAGAACAGTCTTTCGCGCAGGAAGAAACAATATGAATTCGACCTTCAAAGGGAAAAACAAGAAAAAGAAAAGGCTGCAAAGAAGCTTCAAGCAAAGAAGAA
TAACATGAAAGTTGATGGTAGTGGAAAGAAAAAGAAGGGTGGAGGTGGATTTCAAGTTGGGAAGAAAAAAGTGAAGACCAAGTTGACGGCAGCAGCAAAAGCAAAAGCTT
CTCAAGCTATGGACCTTGATAAATGA
mRNA sequenceShow/hide mRNA sequence
CTAGGGTTTAAGAAGACTGACGTTGGGGATATCATCGAGCAAATTTCTGGCGGCAGATCAACAATATGTCGAAGAAGAACAGTCTTTCGCGCAGGAAGAAACAATATGAA
TTCGACCTTCAAAGGGAAAAACAAGAAAAAGAAAAGGCTGCAAAGAAGCTTCAAGCAAAGAAGAATAACATGAAAGTTGATGGTAGTGGAAAGAAAAAGAAGGGTGGAGG
TGGATTTCAAGTTGGGAAGAAAAAAGTGAAGACCAAGTTGACGGCAGCAGCAAAAGCAAAAGCTTCTCAAGCTATGGACCTTGATAAATGAGGTTGGCAATGGGCGCAGA
GGCCGAATCTTCAGGGTACCCCATTAGCCCTTCTTTTGGAGAAAATCTGGTGAAATGCATTGGCATTATTTGAACTGAAGTAATTTATCATTGAAGATCCAATTCGTCTC
ATTCTTTTAGATCGTAGTCCCTTTCTTGTAATCTAATTCGAGTAGAACTCATTCGACATTTTTCCTTCTTTTTGGTATGTCCTTGTAAATTATTTCATATTTTTCAATGA
AAGCTCCATTTTTTTT
Protein sequenceShow/hide protein sequence
MSKKNSLSRRKKQYEFDLQREKQEKEKAAKKLQAKKNNMKVDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKASQAMDLDK