; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0018223 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0018223
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionpentatricopeptide repeat-containing protein At1g62350
Genome locationchr02:7105015..7110379
RNA-Seq ExpressionIVF0018223
SyntenyIVF0018223
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily
IPR044795 - Pentatricopeptide repeat-containing protein THA8L-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7022139.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]7.88e-15087.35Show/hide
Query:  MLRLAPNLLRKISSSPVSSTPFHRFSLSTFLNLDLLQQQLLLRFIAGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDL
        MLR APNLLR+ S+S  S+   +RF+  TF      QQQLLLRFI GSASSPSLSIWRRKKEMGKEGLIVVKELKR+QSN IRLDRFISSHVSRLLKSDL
Subjt:  MLRLAPNLLRKISSSPVSSTPFHRFSLSTFLNLDLLQQQLLLRFIAGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDL

Query:  VAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNAMLSEAMDIYREMRESPDR
        VAVLVELQRQN VFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLK EGVLFDQHTFGDI+RAYLDNAM SEAMDIYREMR+SPDR
Subjt:  VAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNAMLSEAMDIYREMRESPDR

Query:  PLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPEDLFVEDEDRNKS
        PLSLPFRVILKGL+PYPELREQVKDDFLELFPDMIVYDPPEDLF EDED  KS
Subjt:  PLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPEDLFVEDEDRNKS

XP_004139064.1 pentatricopeptide repeat-containing protein At1g62350 isoform X1 [Cucumis sativus]6.02e-17698.44Show/hide
Query:  MLRLAPNLLRKISSSPVSSTPFHRFSLSTFLNLDLLQQQLLLRFIAGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDL
        MLRLAPNLLRKISSSP+SSTPFHRFSLSTFLNLDLLQQQLLLRFI GSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDL
Subjt:  MLRLAPNLLRKISSSPVSSTPFHRFSLSTFLNLDLLQQQLLLRFIAGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDL

Query:  VAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNAMLSEAMDIYREMRESPDR
        VAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDN MLSEAMDIYREMRESPDR
Subjt:  VAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNAMLSEAMDIYREMRESPDR

Query:  PLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPEDLFVEDEDRNKSEDD
        PLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPEDLF EDEDRNKSEDD
Subjt:  PLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPEDLFVEDEDRNKSEDD

XP_008450338.1 PREDICTED: pentatricopeptide repeat-containing protein At1g62350 [Cucumis melo]2.55e-17799.61Show/hide
Query:  MLRLAPNLLRKISSSPVSSTPFHRFSLSTFLNLDLLQQQLLLRFIAGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDL
        MLRLAPNLLRKISSSPVSSTPFHRFSLSTFLNLDLLQQQLLLRFIAGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDL
Subjt:  MLRLAPNLLRKISSSPVSSTPFHRFSLSTFLNLDLLQQQLLLRFIAGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDL

Query:  VAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNAMLSEAMDIYREMRESPDR
        VAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNAMLSEAMDIYREMRESPDR
Subjt:  VAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNAMLSEAMDIYREMRESPDR

Query:  PLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPEDLFVEDEDRNKSEDD
        PLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPEDLF EDEDRNKSEDD
Subjt:  PLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPEDLFVEDEDRNKSEDD

XP_022966084.1 pentatricopeptide repeat-containing protein At1g62350 [Cucurbita maxima]5.72e-15187.75Show/hide
Query:  MLRLAPNLLRKISSSPVSSTPFHRFSLSTFLNLDLLQQQLLLRFIAGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDL
        MLR APNLLR+IS+S  S+   +RF+  TF      QQQLLLRFI GSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSN IRLDRFISSHVSRLLKSDL
Subjt:  MLRLAPNLLRKISSSPVSSTPFHRFSLSTFLNLDLLQQQLLLRFIAGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDL

Query:  VAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNAMLSEAMDIYREMRESPDR
        VAVLVELQRQN VFLCMKLYNVVRKEVWYRPDMFFYRDML MLAKNKRVEETKQVWEDLK EGVLFDQHTFGDI+RAYLDNAM SEAMDIYREMR+SPDR
Subjt:  VAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNAMLSEAMDIYREMRESPDR

Query:  PLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPEDLFVEDEDRNKS
        PLSLPFRVILKGL+PYPELREQV+DDFLELFPDMIVYDPPEDLF EDEDR KS
Subjt:  PLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPEDLFVEDEDRNKS

XP_038878451.1 pentatricopeptide repeat-containing protein At1g62350 [Benincasa hispida]4.20e-15892.71Show/hide
Query:  MLRLAPNLLRKISSSPVSSTPFHRFSLSTFLNLDLLQQQLLLRFIAGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDL
        MLRL  NLLR+IS+S  S+TPFHRFSL TFLN DL QQQLLLRFI GSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDL
Subjt:  MLRLAPNLLRKISSSPVSSTPFHRFSLSTFLNLDLLQQQLLLRFIAGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDL

Query:  VAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNAMLSEAMDIYREMRESPDR
        VAVL ELQRQN VFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVW+DLKKEGVLFDQHTFGDIIRAYLDNAM SEAMDIYREMRESPDR
Subjt:  VAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNAMLSEAMDIYREMRESPDR

Query:  PLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPEDLFVED
        PLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPE+LF E+
Subjt:  PLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPEDLFVED

TrEMBL top hitse value%identityAlignment
A0A1S3BQ11 pentatricopeptide repeat-containing protein At1g623505.1e-13799.61Show/hide
Query:  MLRLAPNLLRKISSSPVSSTPFHRFSLSTFLNLDLLQQQLLLRFIAGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDL
        MLRLAPNLLRKISSSPVSSTPFHRFSLSTFLNLDLLQQQLLLRFIAGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDL
Subjt:  MLRLAPNLLRKISSSPVSSTPFHRFSLSTFLNLDLLQQQLLLRFIAGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDL

Query:  VAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNAMLSEAMDIYREMRESPDR
        VAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNAMLSEAMDIYREMRESPDR
Subjt:  VAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNAMLSEAMDIYREMRESPDR

Query:  PLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPEDLFVEDEDRNKSEDD
        PLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPEDLF EDEDRNKSEDD
Subjt:  PLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPEDLFVEDEDRNKSEDD

A0A2I4F1J6 pentatricopeptide repeat-containing protein At1g623507.4e-9672.03Show/hide
Query:  MLRLAPNLLRKISSSPVSSTPFHRFSLSTFLNLDLL-----QQQLLLRFIAGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRL
        MLR A NL RK S S  +  P   FS +  L L        QQ+  LR++AGSASSPSLSIWRR+KEMGKEGLIV KELKRL+ N +RLDRFI SHVSRL
Subjt:  MLRLAPNLLRKISSSPVSSTPFHRFSLSTFLNLDLL-----QQQLLLRFIAGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRL

Query:  LKSDLVAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNAMLSEAMDIYREMR
        LKSDL+AVL E QRQ+ + LCMKLY+VVRKE+WYRPDM+FYRDMLMMLA+NK+V+E KQVWEDLKKE VLFDQHTFGDIIRA+LDN + SEAMDIY EMR
Subjt:  LKSDLVAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNAMLSEAMDIYREMR

Query:  ESPDRPLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPEDLFVEDEDRNKSEDD
         SPD P+SLPFRVILKGL+PYPELRE++KDDFLELFPDM+VYDPPEDLF  ++ R K  DD
Subjt:  ESPDRPLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPEDLFVEDEDRNKSEDD

A0A6J1DGX4 pentatricopeptide repeat-containing protein At1g623501.8e-11384.05Show/hide
Query:  MLRLAPNLLRKISS--SPVSSTPFHRFSLSTFLNLDLLQQQLLLRFIAGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKS
        MLRL PNLLR+  +  +  ++ PFH  S  TF + D LQQQ L RFI GSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSN IRLDRFISSHVSRLLKS
Subjt:  MLRLAPNLLRKISS--SPVSSTPFHRFSLSTFLNLDLLQQQLLLRFIAGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKS

Query:  DLVAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNAMLSEAMDIYREMRESP
        DLVAVLVELQRQ  VFLCMKLYNVVRKEVWYRPDMFFYRDMLMML+KNK+VEETKQVW+DLK+E VLFDQHTFGDIIRAYLDN M SEAMDIYREMR+SP
Subjt:  DLVAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNAMLSEAMDIYREMRESP

Query:  DRPLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPEDLFVEDEDRNKSED
        DRPLSLPFRVILKGLIPYPELREQ+KDDFLELFPDMIVYDPPEDLF EDEDR +  D
Subjt:  DRPLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPEDLFVEDEDRNKSED

A0A6J1EQI1 pentatricopeptide repeat-containing protein At1g623505.5e-11586.56Show/hide
Query:  MLRLAPNLLRKISSSPVSSTPFHRFSLSTFLNLDLLQQQLLLRFIAGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDL
        MLR APNLLR+ S+S  S+   +R +  TF      QQQLLLRFI GSASSPSLSIWRRKKEMGKEGLIVVKELKR+QSN IRLDRFISSHVSRLLKSDL
Subjt:  MLRLAPNLLRKISSSPVSSTPFHRFSLSTFLNLDLLQQQLLLRFIAGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDL

Query:  VAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNAMLSEAMDIYREMRESPDR
        VAVLVELQRQN VFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLK EGVLFDQHTFGDI+RAYLDNAM SEAMDIYREMR+SPDR
Subjt:  VAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNAMLSEAMDIYREMRESPDR

Query:  PLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPEDLFVEDEDRNKS
        PLSLPFRVILKGL+PYPELREQVKDDFLELFPDMIVYDPPEDLF EDE   KS
Subjt:  PLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPEDLFVEDEDRNKS

A0A6J1HQL7 pentatricopeptide repeat-containing protein At1g623505.8e-11787.75Show/hide
Query:  MLRLAPNLLRKISSSPVSSTPFHRFSLSTFLNLDLLQQQLLLRFIAGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDL
        MLR APNLLR+IS+S  S+   +RF+  TF      QQQLLLRFI GSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSN IRLDRFISSHVSRLLKSDL
Subjt:  MLRLAPNLLRKISSSPVSSTPFHRFSLSTFLNLDLLQQQLLLRFIAGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDL

Query:  VAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNAMLSEAMDIYREMRESPDR
        VAVLVELQRQN VFLCMKLYNVVRKEVWYRPDMFFYRDML MLAKNKRVEETKQVWEDLK EGVLFDQHTFGDI+RAYLDNAM SEAMDIYREMR+SPDR
Subjt:  VAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNAMLSEAMDIYREMRESPDR

Query:  PLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPEDLFVEDEDRNKS
        PLSLPFRVILKGL+PYPELREQV+DDFLELFPDMIVYDPPEDLF EDEDR KS
Subjt:  PLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPEDLFVEDEDRNKS

SwissProt top hitse value%identityAlignment
Q1PFH7 Pentatricopeptide repeat-containing protein At1g623501.0e-8175.77Show/hide
Query:  MGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDLVAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKE
        M KEGLI  KELKRLQ+  +RLDRFI SHVSRLLKSDLV+VL E QRQN VFLCMKLY VVR+E+WYRPDMFFYRDMLMMLA+NK+V+ETK+VWEDLKKE
Subjt:  MGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDLVAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKE

Query:  GVLFDQHTFGDIIRAYLDNAMLSEAMDIYREMRESPDRPLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPEDLFVEDEDRNKSEDD
         VLFDQHTFGD++R +LDN +  EAM +Y EMRESPDRPLSLPFRVILKGL+PYPELRE+VKDDFLELFP MIVYDPPED+  + ++  +++ D
Subjt:  GVLFDQHTFGDIIRAYLDNAMLSEAMDIYREMRESPDRPLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPEDLFVEDEDRNKSEDD

Q9FKC3 Pentatricopeptide repeat-containing protein At5g48730, chloroplastic2.2e-0419.19Show/hide
Query:  MKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNAMLSEAMDIYREMRESPD-RPLSLPFRVILKGLI
        ++++ ++R+++WY+P++  Y  +++ML K K+ E+  ++++++  EG + +   +  ++ AY  +     A  +   M+ S + +P    + +++K  +
Subjt:  MKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNAMLSEAMDIYREMRESPD-RPLSLPFRVILKGLI

Q9LVW6 Protein THYLAKOID ASSEMBLY 8, chloroplastic2.6e-0527.94Show/hide
Query:  MGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDLVAVLVELQRQNHVFLCMKLYNVVRKEVWYRP-DMFFYRDMLMMLAKNKRVEETKQVWEDLKK
        +  E +  ++ LKR     + L   +   + RL+KSDL++VL EL RQ++  L + + + +R E  Y P D+  Y D++  L +NK  +E  ++  ++  
Subjt:  MGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDLVAVLVELQRQNHVFLCMKLYNVVRKEVWYRP-DMFFYRDMLMMLAKNKRVEETKQVWEDLKK

Query:  EGVLFDQHTFGDIIRAYLDNAMLSEAMDIYREMRES
             D      +IRA +        + +Y  MRES
Subjt:  EGVLFDQHTFGDIIRAYLDNAMLSEAMDIYREMRES

Q9STF9 Protein THYLAKOID ASSEMBLY 8-like, chloroplastic7.0e-5147.52Show/hide
Query:  RFIAGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDLVAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMM
        RF  G    P   +WR KK +GKE L V+  LKRL+ +  +LD+FI +HV RLLK D++AV+ EL+RQ    L +K++ V++K+ WY+PD+F Y+D+++ 
Subjt:  RFIAGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDLVAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMM

Query:  LAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNAMLSEAMDIYREMRESPDRPLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPED
        LAK+KR++E   +WE +KKE +  D  T+ ++IR +L +   ++AM++Y +M +SPD P  LPFRV+LKGL+P+P LR +VK DF ELFP+   YDPPE+
Subjt:  LAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNAMLSEAMDIYREMRESPDRPLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPED

Query:  LF
        +F
Subjt:  LF

Q9ZVX5 Pentatricopeptide repeat-containing protein At2g168804.4e-0525.89Show/hide
Query:  PDMFFYRDMLMMLAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNAMLSEAMDIYREMRESPDRPLSLPFRVILKGLIPYPELRE--QVKDDF-
        PD   Y  +L  ++K  R+ + K++  D+KK G++ ++ T+ +++  Y     L EA  I   M+++   P    + +++ GL     +RE  ++ D   
Subjt:  PDMFFYRDMLMMLAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNAMLSEAMDIYREMRESPDRPLSLPFRVILKGLIPYPELRE--QVKDDF-

Query:  -LELFPDMIVYD
         L+L PD++ Y+
Subjt:  -LELFPDMIVYD

Arabidopsis top hitse value%identityAlignment
AT1G62350.1 Pentatricopeptide repeat (PPR) superfamily protein7.1e-8375.77Show/hide
Query:  MGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDLVAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKE
        M KEGLI  KELKRLQ+  +RLDRFI SHVSRLLKSDLV+VL E QRQN VFLCMKLY VVR+E+WYRPDMFFYRDMLMMLA+NK+V+ETK+VWEDLKKE
Subjt:  MGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDLVAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKE

Query:  GVLFDQHTFGDIIRAYLDNAMLSEAMDIYREMRESPDRPLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPEDLFVEDEDRNKSEDD
         VLFDQHTFGD++R +LDN +  EAM +Y EMRESPDRPLSLPFRVILKGL+PYPELRE+VKDDFLELFP MIVYDPPED+  + ++  +++ D
Subjt:  GVLFDQHTFGDIIRAYLDNAMLSEAMDIYREMRESPDRPLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPEDLFVEDEDRNKSEDD

AT3G27750.1 FUNCTIONS IN: molecular_function unknown1.8e-0627.94Show/hide
Query:  MGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDLVAVLVELQRQNHVFLCMKLYNVVRKEVWYRP-DMFFYRDMLMMLAKNKRVEETKQVWEDLKK
        +  E +  ++ LKR     + L   +   + RL+KSDL++VL EL RQ++  L + + + +R E  Y P D+  Y D++  L +NK  +E  ++  ++  
Subjt:  MGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDLVAVLVELQRQNHVFLCMKLYNVVRKEVWYRP-DMFFYRDMLMMLAKNKRVEETKQVWEDLKK

Query:  EGVLFDQHTFGDIIRAYLDNAMLSEAMDIYREMRES
             D      +IRA +        + +Y  MRES
Subjt:  EGVLFDQHTFGDIIRAYLDNAMLSEAMDIYREMRES

AT3G42570.1 peroxidase family protein8.3e-0773.53Show/hide
Query:  KKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVS
        KKE  KEGLI  KELKRLQ+N +RLDRFI SH S
Subjt:  KKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVS

AT3G46870.1 Pentatricopeptide repeat (PPR) superfamily protein5.0e-5247.52Show/hide
Query:  RFIAGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDLVAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMM
        RF  G    P   +WR KK +GKE L V+  LKRL+ +  +LD+FI +HV RLLK D++AV+ EL+RQ    L +K++ V++K+ WY+PD+F Y+D+++ 
Subjt:  RFIAGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDLVAVLVELQRQNHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMM

Query:  LAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNAMLSEAMDIYREMRESPDRPLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPED
        LAK+KR++E   +WE +KKE +  D  T+ ++IR +L +   ++AM++Y +M +SPD P  LPFRV+LKGL+P+P LR +VK DF ELFP+   YDPPE+
Subjt:  LAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNAMLSEAMDIYREMRESPDRPLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPPED

Query:  LF
        +F
Subjt:  LF

AT5G09320.1 Vacuolar sorting protein 9 (VPS9) domain3.0e-1730.46Show/hide
Query:  LDLLQQQLLLRFIAGSASSPSLSIWRRKKEMGKEGLIVVKELKR---------------LQSNFIRLDRFISSHVSRLLKSDLVAVLVELQRQNHVFLCM
        + +LQ+ ++++    S +   L   +R + +  E +  V+ LKR                 S+   LDR I S   RLLK D+VAVL EL RQN   L +
Subjt:  LDLLQQQLLLRFIAGSASSPSLSIWRRKKEMGKEGLIVVKELKR---------------LQSNFIRLDRFISSHVSRLLKSDLVAVLVELQRQNHVFLCM

Query:  KLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKE-GVLFDQHTFGDIIRAYLDNAMLSEAMDIYREMRESPDRPLSLPFRVILKGL
        K++  +RKE WY+P +  Y DM+ ++A N  +EE   ++  +K E G++ +   F  ++   L++ +    MD Y  M+     P    FRV++ GL
Subjt:  KLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKE-GVLFDQHTFGDIIRAYLDNAMLSEAMDIYREMRESPDRPLSLPFRVILKGL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCGTCTTGCTCCAAATCTTCTTCGCAAAATCTCAAGCAGCCCCGTTTCCTCAACCCCTTTCCATCGTTTTTCCCTTTCCACATTTCTCAACCTCGATCTGTTACA
GCAACAGTTGCTGTTACGCTTCATCGCTGGCTCTGCTTCGAGCCCTAGCCTCTCAATATGGAGGAGGAAGAAGGAGATGGGCAAGGAGGGTCTGATTGTAGTCAAAGAAC
TCAAGAGACTTCAGTCCAATTTCATTCGCCTCGACCGCTTCATTTCCTCCCATGTCTCTCGCTTGCTCAAGTCCGACCTTGTTGCGGTTCTTGTTGAGCTTCAGAGACAG
AATCATGTCTTTCTCTGCATGAAATTGTATAACGTGGTTCGTAAAGAAGTATGGTACCGGCCCGACATGTTCTTTTATAGAGATATGCTGATGATGCTTGCAAAGAACAA
AAGGGTAGAAGAAACAAAACAAGTTTGGGAGGATCTGAAAAAAGAGGGTGTGTTATTTGATCAGCATACTTTTGGAGACATTATTCGAGCATACTTGGATAATGCAATGC
TCTCTGAGGCCATGGATATCTATCGTGAAATGAGAGAATCTCCTGATAGGCCATTATCTTTGCCTTTTCGTGTCATTCTTAAGGGCCTTATTCCATATCCAGAATTGAGA
GAACAAGTTAAAGATGACTTCTTGGAGCTCTTCCCTGATATGATCGTCTATGATCCACCAGAAGACTTGTTTGTAGAAGATGAAGATAGAAACAAGAGTGAAGATGATTA
A
mRNA sequenceShow/hide mRNA sequence
ACAAGCTGCATAAACCCCGCCCACTCTCACAAGCTGTACAAAGAGAGAAAAACTCCGGTCCTCTATTGCTTCAAGGTTCCTTCACAATTTTGATGCTTCGTCTTGCTCCA
AATCTTCTTCGCAAAATCTCAAGCAGCCCCGTTTCCTCAACCCCTTTCCATCGTTTTTCCCTTTCCACATTTCTCAACCTCGATCTGTTACAGCAACAGTTGCTGTTACG
CTTCATCGCTGGCTCTGCTTCGAGCCCTAGCCTCTCAATATGGAGGAGGAAGAAGGAGATGGGCAAGGAGGGTCTGATTGTAGTCAAAGAACTCAAGAGACTTCAGTCCA
ATTTCATTCGCCTCGACCGCTTCATTTCCTCCCATGTCTCTCGCTTGCTCAAGTCCGACCTTGTTGCGGTTCTTGTTGAGCTTCAGAGACAGAATCATGTCTTTCTCTGC
ATGAAATTGTATAACGTGGTTCGTAAAGAAGTATGGTACCGGCCCGACATGTTCTTTTATAGAGATATGCTGATGATGCTTGCAAAGAACAAAAGGGTAGAAGAAACAAA
ACAAGTTTGGGAGGATCTGAAAAAAGAGGGTGTGTTATTTGATCAGCATACTTTTGGAGACATTATTCGAGCATACTTGGATAATGCAATGCTCTCTGAGGCCATGGATA
TCTATCGTGAAATGAGAGAATCTCCTGATAGGCCATTATCTTTGCCTTTTCGTGTCATTCTTAAGGGCCTTATTCCATATCCAGAATTGAGAGAACAAGTTAAAGATGAC
TTCTTGGAGCTCTTCCCTGATATGATCGTCTATGATCCACCAGAAGACTTGTTTGTAGAAGATGAAGATAGAAACAAGAGTGAAGATGATTAACTAATTAAGAATGCTGC
TCTTGCAATTGTAGCCTTTAAGTTTTGAGTTTCGATGTGTCTGTATAGTTTCAAAAATGTCGAAGAAATCTTTGATTTTCAATTACGTAATTGGTTAATTCGTGAACTTT
AAAAGTGCGAATTAGTTCTTTAATTTTTTATTTTGTGCGACCTATTAGACATGTTTTAAAATTCATAGGACTATTTGACTCAAGGTAAATCTAGTTGTGTTCAATAAAGG
TGTGTTTTGAAAA
Protein sequenceShow/hide protein sequence
MLRLAPNLLRKISSSPVSSTPFHRFSLSTFLNLDLLQQQLLLRFIAGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDLVAVLVELQRQ
NHVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLDNAMLSEAMDIYREMRESPDRPLSLPFRVILKGLIPYPELR
EQVKDDFLELFPDMIVYDPPEDLFVEDEDRNKSEDD