; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0018224 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0018224
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionReverse transcriptase
Genome locationchr01:21715984..21717489
RNA-Seq ExpressionIVF0018224
SyntenyIVF0018224
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR041588 - Integrase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036812.1 reverse transcriptase [Cucumis melo var. makuwa]8.75e-21477.32Show/hide
Query:  MGEVAMSVGKLGSLVAHFQVRPILIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKYDRLCVPSDQTIKDQISEEAHSSAYAMHPGSTKVYRT
        MGEVA+SVGKLGSL+AHFQV+PILIDRIIK QLDDA LRKLAE+VRQNQR NYSLRG GALMKYDRLCVPSDQ IKDQI EEAHS AYA HPGSTK+YRT
Subjt:  MGEVAMSVGKLGSLVAHFQVRPILIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKYDRLCVPSDQTIKDQISEEAHSSAYAMHPGSTKVYRT

Query:  LKKHYWWPGMKREIADYVAKCLICQQ----------------------EHVTMDFLFGLPRTTNGNDGIWVIVDRLTKTARFLPVKLTFTLDKLAKLYVD
        LKKHYWWPGMK EIADYVAKCLICQQ                      EHVTMDFLFGLP TTNG+DGIWVIVDRLTKTARFL VK+TFTLDKLAKLYVD
Subjt:  LKKHYWWPGMKREIADYVAKCLICQQ----------------------EHVTMDFLFGLPRTTNGNDGIWVIVDRLTKTARFLPVKLTFTLDKLAKLYVD

Query:  KIVSAYGAPISIVFDRDFRFTSKFWPSLQQALGTKLHFSTTFHPQTDGQSERTIQTLEDMLRACALQFKGNWDAHLSLMEFAYNNSFHSSNGVAPYEALH
        KIVSAYGA ISIV +RD RFTSKFWPSLQQALGTKLHFST FHP+TDGQS+RTIQTLEDML AC LQFKG WDAHLSLMEFAYNNSFHSS G+APYEAL+
Subjt:  KIVSAYGAPISIVFDRDFRFTSKFWPSLQQALGTKLHFSTTFHPQTDGQSERTIQTLEDMLRACALQFKGNWDAHLSLMEFAYNNSFHSSNGVAPYEALH

Query:  GRRCRTPVWWDEVGERKLVGPELVQITSENVKIIRER--------LKTAQDRQKSYADKRRQDLEFEV-EFMNVFHVSMPCKYVPDPSHILKAQPVHLKE
        GRRCRTPV WDEVGERKLVGPELVQ TSENVKIIRER        +   +  ++      R  L  E+    +VFHVSM  KYVPDPSHIL+AQPVHLKE
Subjt:  GRRCRTPVWWDEVGERKLVGPELVQITSENVKIIRER--------LKTAQDRQKSYADKRRQDLEFEV-EFMNVFHVSMPCKYVPDPSHILKAQPVHLKE

Query:  NLSYKEEQIQ
        NLSY+EE IQ
Subjt:  NLSYKEEQIQ

KAA0042141.1 hypothetical protein E6C27_scaffold67G006300 [Cucumis melo var. makuwa]9.37e-19796.95Show/hide
Query:  MGEVAMSVGKLGSLVAHFQVRPILIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKYDRLCVPSDQTIKDQISEEAHSSAYAMHPGSTKVYRT
        MGEVAMSVGKLGSLVAHFQVRPILIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKYDRLCVPSDQTIKDQISEEAHSSAYAMHPGSTKVYRT
Subjt:  MGEVAMSVGKLGSLVAHFQVRPILIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKYDRLCVPSDQTIKDQISEEAHSSAYAMHPGSTKVYRT

Query:  LKKHYWWPGMKREIADYVAKCLICQQEHVTMDFLFGLPRTTNGNDGIWVIVDRLTKTARFLPVKLTFTLDKLAKLYVDKIVSAYGAPISIVFDRDFRFTS
        LKKHYWWPGMKREIADY         EHVTMDFLFGLPRTTNGNDGIWVIVDRLTKTARFLPVKLTFTLDKLAKLYVDKIVSAYGAPISIVFDRDFRFTS
Subjt:  LKKHYWWPGMKREIADYVAKCLICQQEHVTMDFLFGLPRTTNGNDGIWVIVDRLTKTARFLPVKLTFTLDKLAKLYVDKIVSAYGAPISIVFDRDFRFTS

Query:  KFWPSLQQALGTKLHFSTTFHPQTDGQSERTIQTLEDMLRACALQFKGNWDAHLSLMEFAYNNSFHSSNGVAPYEALHGRRCRTPVWWDEVGERK
        KFWPSLQQALGTKLHFSTTFHPQTDGQSERTIQTLEDMLRACALQFKGNWDAHLSLMEFAYNNSFHSSNGVAPYEALHGRRCRTPVWWDEVGERK
Subjt:  KFWPSLQQALGTKLHFSTTFHPQTDGQSERTIQTLEDMLRACALQFKGNWDAHLSLMEFAYNNSFHSSNGVAPYEALHGRRCRTPVWWDEVGERK

KAA0053246.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]3.65e-19859.96Show/hide
Query:  GSLVAHFQVRPILIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKYDRLCVPSDQTIKDQISEEAHSSAYAMHPGSTKVYRTLKKHYWWPGMK
        GSL+A FQVR  L+  I++ Q +D+ L+K  E+ ++   + + LR DGA++K  RLCVP+   +K+ I EEAHSSAYAMHPGSTK+YRTLKK YWW GMK
Subjt:  GSLVAHFQVRPILIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKYDRLCVPSDQTIKDQISEEAHSSAYAMHPGSTKVYRTLKKHYWWPGMK

Query:  REIADYVAKCLICQQ----------------------EHVTMDFLFGLPRTTNGNDGIWVIVDRLTKTARFLPVKLTFTLDKLAKLYVDKIVSAYGAPIS
        +EIA+YV +CLICQQ                      EH+TMDFLFGLPRT++G+DGIWVIVDRLTKT RF+P+K+T TLD+LA+LYVDKIVS YG P+S
Subjt:  REIADYVAKCLICQQ----------------------EHVTMDFLFGLPRTTNGNDGIWVIVDRLTKTARFLPVKLTFTLDKLAKLYVDKIVSAYGAPIS

Query:  IVFDRDFRFTSKFWPSLQQALGTKLHFSTTFHPQTDGQSERTIQTLEDMLRACALQFKGNWDAHLSLMEFAYNNSFHSSNGVAPYEALHGRRCRTPVWWD
        IV DRD RFTSKFWPSLQ+A+GT L FST+FHPQTDGQSERTIQTLEDMLRAC LQ KG+WD HL LMEFAYNN++ SS G+APYEAL+GR CRTPV W+
Subjt:  IVFDRDFRFTSKFWPSLQQALGTKLHFSTTFHPQTDGQSERTIQTLEDMLRACALQFKGNWDAHLSLMEFAYNNSFHSSNGVAPYEALHGRRCRTPVWWD

Query:  EVGERKLVGPELVQITSENVKIIRERLKTAQDRQKSYADKRRQDLEFEV---------------------------------------------------
        EVGERKLVGPELVQIT+ N+K+IRE L+ AQDRQKSYADKRR++LEF+V                                                   
Subjt:  EVGERKLVGPELVQITSENVKIIRERLKTAQDRQKSYADKRRQDLEFEV---------------------------------------------------

Query:  EFMNVFHVSMPCKYVPDPSHILKAQPVHLKENLSYKEEQIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWETKQAMKAQYPHLFT
           +VFHVSM  KY+PDPSH+L+ QPV LKE+LSY EE +QILD+KEQVLRNK IPL+KVLWR+H  EEATWE +  MK  YP LF+
Subjt:  EFMNVFHVSMPCKYVPDPSHILKAQPVHLKENLSYKEEQIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWETKQAMKAQYPHLFT

KAA0056222.1 reverse transcriptase [Cucumis melo var. makuwa]8.61e-23672.65Show/hide
Query:  MGEVAMSVGKLGSLVAHFQVRPILIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKYDRLCVPSDQTIKDQISEEAHSSAYAMHPGSTKVYRT
        MGE A+SVGKL SLVAHFQVRP LIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMK DRLCVPSDQTIKDQI EEAHSSAYAMHPGSTKVYRT
Subjt:  MGEVAMSVGKLGSLVAHFQVRPILIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKYDRLCVPSDQTIKDQISEEAHSSAYAMHPGSTKVYRT

Query:  LKKHYWWPGMKREIADYVAKCLICQQ----------------------EHVTMDFLFGLPRTTNGNDGIWVIVDRLTKTARFLPVKLTFTLDKLAKLYVD
        LKKHYWWPG+KREIADYVAKCLICQQ                      EHVTMDF  GLPRTTNGNDGIWVIVDRLTKTARFLPVK+TFTLDKLAKLYVD
Subjt:  LKKHYWWPGMKREIADYVAKCLICQQ----------------------EHVTMDFLFGLPRTTNGNDGIWVIVDRLTKTARFLPVKLTFTLDKLAKLYVD

Query:  KIVSAYGAPISIVFDRDFRFTSKFWPSLQQALGTKLHFSTTFHPQTDGQSERTIQTLEDMLRACALQFKGNWDAHLSLMEFAYNNSFHSSNGVAPYEALH
        KIVSAYGAPISIV DRD +FTSKFWPSLQQAL                          DMLRACALQFKGNWDAHLSLMEFAYNNSFHSS G+A YEAL+
Subjt:  KIVSAYGAPISIVFDRDFRFTSKFWPSLQQALGTKLHFSTTFHPQTDGQSERTIQTLEDMLRACALQFKGNWDAHLSLMEFAYNNSFHSSNGVAPYEALH

Query:  GRRCRTPVWWDEVGERKLVGPELVQITSENVKIIRERLKTAQDRQKSYADKRRQDLEFEVE---------------------------------------
        GR CRT V W+EVGERKLVG ELVQITSENVKIIRERLKTAQDR+KSYADKRR+DLEFEV                                        
Subjt:  GRRCRTPVWWDEVGERKLVGPELVQITSENVKIIRERLKTAQDRQKSYADKRRQDLEFEVE---------------------------------------

Query:  ------------FMNVFHVSMPCKYVPDPSHILKAQPVHLKENLSYKEEQIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWETKQAMKAQYPHLFTSS
                      +VFHVSM  KYVPDP+HIL+AQPVHLKENLSY+EE IQILDKKEQV+RNK+IPLVKVLWRNHNTEEATWET+QAMKAQYP+LFTSS
Subjt:  ------------FMNVFHVSMPCKYVPDPSHILKAQPVHLKENLSYKEEQIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWETKQAMKAQYPHLFTSS

Query:  P
        P
Subjt:  P

TYK18080.1 hypothetical protein E5676_scaffold306G004160 [Cucumis melo var. makuwa]3.75e-19696.61Show/hide
Query:  MGEVAMSVGKLGSLVAHFQVRPILIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKYDRLCVPSDQTIKDQISEEAHSSAYAMHPGSTKVYRT
        MGEVAMSVGKLGSLVAHFQVRPILIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKYDRLCVPSDQTIKDQISEEAHSSAYAMHPGSTKVYRT
Subjt:  MGEVAMSVGKLGSLVAHFQVRPILIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKYDRLCVPSDQTIKDQISEEAHSSAYAMHPGSTKVYRT

Query:  LKKHYWWPGMKREIADYVAKCLICQQEHVTMDFLFGLPRTTNGNDGIWVIVDRLTKTARFLPVKLTFTLDKLAKLYVDKIVSAYGAPISIVFDRDFRFTS
        LKKHYWWPGMKREIADY         EHVTMDFLFGLPRTTNGNDGIWVIVDRLTKTARFLPVKLTFTLDKLAKLYVDKIVSAYGAPISIVFD+DFRFTS
Subjt:  LKKHYWWPGMKREIADYVAKCLICQQEHVTMDFLFGLPRTTNGNDGIWVIVDRLTKTARFLPVKLTFTLDKLAKLYVDKIVSAYGAPISIVFDRDFRFTS

Query:  KFWPSLQQALGTKLHFSTTFHPQTDGQSERTIQTLEDMLRACALQFKGNWDAHLSLMEFAYNNSFHSSNGVAPYEALHGRRCRTPVWWDEVGERK
        KFWPSLQQALGTKLHFSTTFHPQTDGQSERTIQTLEDMLRACALQFKGNWDAHLSLMEFAYNNSFHSSNGVAPYEALHGRRCRTPVWWDEVGERK
Subjt:  KFWPSLQQALGTKLHFSTTFHPQTDGQSERTIQTLEDMLRACALQFKGNWDAHLSLMEFAYNNSFHSSNGVAPYEALHGRRCRTPVWWDEVGERK

TrEMBL top hitse value%identityAlignment
A0A5A7T060 Reverse transcriptase1.2e-17077.32Show/hide
Query:  MGEVAMSVGKLGSLVAHFQVRPILIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKYDRLCVPSDQTIKDQISEEAHSSAYAMHPGSTKVYRT
        MGEVA+SVGKLGSL+AHFQV+PILIDRIIK QLDDA LRKLAE+VRQNQR NYSLRG GALMKYDRLCVPSDQ IKDQI EEAHS AYA HPGSTK+YRT
Subjt:  MGEVAMSVGKLGSLVAHFQVRPILIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKYDRLCVPSDQTIKDQISEEAHSSAYAMHPGSTKVYRT

Query:  LKKHYWWPGMKREIADYVAKCLICQQ----------------------EHVTMDFLFGLPRTTNGNDGIWVIVDRLTKTARFLPVKLTFTLDKLAKLYVD
        LKKHYWWPGMK EIADYVAKCLICQQ                      EHVTMDFLFGLP TTNG+DGIWVIVDRLTKTARFL VK+TFTLDKLAKLYVD
Subjt:  LKKHYWWPGMKREIADYVAKCLICQQ----------------------EHVTMDFLFGLPRTTNGNDGIWVIVDRLTKTARFLPVKLTFTLDKLAKLYVD

Query:  KIVSAYGAPISIVFDRDFRFTSKFWPSLQQALGTKLHFSTTFHPQTDGQSERTIQTLEDMLRACALQFKGNWDAHLSLMEFAYNNSFHSSNGVAPYEALH
        KIVSAYGA ISIV +RD RFTSKFWPSLQQALGTKLHFST FHP+TDGQS+RTIQTLEDML AC LQFKG WDAHLSLMEFAYNNSFHSS G+APYEAL+
Subjt:  KIVSAYGAPISIVFDRDFRFTSKFWPSLQQALGTKLHFSTTFHPQTDGQSERTIQTLEDMLRACALQFKGNWDAHLSLMEFAYNNSFHSSNGVAPYEALH

Query:  GRRCRTPVWWDEVGERKLVGPELVQITSENVKIIRER--------LKTAQDRQKSYADKRRQDLEFEV-EFMNVFHVSMPCKYVPDPSHILKAQPVHLKE
        GRRCRTPV WDEVGERKLVGPELVQ TSENVKIIRER        +   +  ++      R  L  E+    +VFHVSM  KYVPDPSHIL+AQPVHLKE
Subjt:  GRRCRTPVWWDEVGERKLVGPELVQITSENVKIIRER--------LKTAQDRQKSYADKRRQDLEFEV-EFMNVFHVSMPCKYVPDPSHILKAQPVHLKE

Query:  NLSYKEEQIQ
        NLSY+EE IQ
Subjt:  NLSYKEEQIQ

A0A5A7TKQ0 Uncharacterized protein1.5e-16296.95Show/hide
Query:  MGEVAMSVGKLGSLVAHFQVRPILIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKYDRLCVPSDQTIKDQISEEAHSSAYAMHPGSTKVYRT
        MGEVAMSVGKLGSLVAHFQVRPILIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKYDRLCVPSDQTIKDQISEEAHSSAYAMHPGSTKVYRT
Subjt:  MGEVAMSVGKLGSLVAHFQVRPILIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKYDRLCVPSDQTIKDQISEEAHSSAYAMHPGSTKVYRT

Query:  LKKHYWWPGMKREIADYVAKCLICQQEHVTMDFLFGLPRTTNGNDGIWVIVDRLTKTARFLPVKLTFTLDKLAKLYVDKIVSAYGAPISIVFDRDFRFTS
        LKKHYWWPGMKREIADY         EHVTMDFLFGLPRTTNGNDGIWVIVDRLTKTARFLPVKLTFTLDKLAKLYVDKIVSAYGAPISIVFDRDFRFTS
Subjt:  LKKHYWWPGMKREIADYVAKCLICQQEHVTMDFLFGLPRTTNGNDGIWVIVDRLTKTARFLPVKLTFTLDKLAKLYVDKIVSAYGAPISIVFDRDFRFTS

Query:  KFWPSLQQALGTKLHFSTTFHPQTDGQSERTIQTLEDMLRACALQFKGNWDAHLSLMEFAYNNSFHSSNGVAPYEALHGRRCRTPVWWDEVGERK
        KFWPSLQQALGTKLHFSTTFHPQTDGQSERTIQTLEDMLRACALQFKGNWDAHLSLMEFAYNNSFHSSNGVAPYEALHGRRCRTPVWWDEVGERK
Subjt:  KFWPSLQQALGTKLHFSTTFHPQTDGQSERTIQTLEDMLRACALQFKGNWDAHLSLMEFAYNNSFHSSNGVAPYEALHGRRCRTPVWWDEVGERK

A0A5A7U2V7 Reverse transcriptase1.1e-16059.96Show/hide
Query:  GSLVAHFQVRPILIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKYDRLCVPSDQTIKDQISEEAHSSAYAMHPGSTKVYRTLKKHYWWPGMK
        GSL+A FQVR  L+  I++ Q +D+ L+K  E+ ++   + + LR DGA++K  RLCVP+   +K+ I EEAHSSAYAMHPGSTK+YRTLKK YWW GMK
Subjt:  GSLVAHFQVRPILIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKYDRLCVPSDQTIKDQISEEAHSSAYAMHPGSTKVYRTLKKHYWWPGMK

Query:  REIADYVAKCLICQQ----------------------EHVTMDFLFGLPRTTNGNDGIWVIVDRLTKTARFLPVKLTFTLDKLAKLYVDKIVSAYGAPIS
        +EIA+YV +CLICQQ                      EH+TMDFLFGLPRT++G+DGIWVIVDRLTKT RF+P+K+T TLD+LA+LYVDKIVS YG P+S
Subjt:  REIADYVAKCLICQQ----------------------EHVTMDFLFGLPRTTNGNDGIWVIVDRLTKTARFLPVKLTFTLDKLAKLYVDKIVSAYGAPIS

Query:  IVFDRDFRFTSKFWPSLQQALGTKLHFSTTFHPQTDGQSERTIQTLEDMLRACALQFKGNWDAHLSLMEFAYNNSFHSSNGVAPYEALHGRRCRTPVWWD
        IV DRD RFTSKFWPSLQ+A+GT L FST+FHPQTDGQSERTIQTLEDMLRAC LQ KG+WD HL LMEFAYNN++ SS G+APYEAL+GR CRTPV W+
Subjt:  IVFDRDFRFTSKFWPSLQQALGTKLHFSTTFHPQTDGQSERTIQTLEDMLRACALQFKGNWDAHLSLMEFAYNNSFHSSNGVAPYEALHGRRCRTPVWWD

Query:  EVGERKLVGPELVQITSENVKIIRERLKTAQDRQKSYADKRRQDLEFEV---------------------------------------------------
        EVGERKLVGPELVQIT+ N+K+IRE L+ AQDRQKSYADKRR++LEF+V                                                   
Subjt:  EVGERKLVGPELVQITSENVKIIRERLKTAQDRQKSYADKRRQDLEFEV---------------------------------------------------

Query:  EFMNVFHVSMPCKYVPDPSHILKAQPVHLKENLSYKEEQIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWETKQAMKAQYPHLFT
           +VFHVSM  KY+PDPSH+L+ QPV LKE+LSY EE +QILD+KEQVLRNK IPL+KVLWR+H  EEATWE +  MK  YP LF+
Subjt:  EFMNVFHVSMPCKYVPDPSHILKAQPVHLKENLSYKEEQIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWETKQAMKAQYPHLFT

A0A5A7UK27 Reverse transcriptase2.1e-19172.65Show/hide
Query:  MGEVAMSVGKLGSLVAHFQVRPILIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKYDRLCVPSDQTIKDQISEEAHSSAYAMHPGSTKVYRT
        MGE A+SVGKL SLVAHFQVRP LIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMK DRLCVPSDQTIKDQI EEAHSSAYAMHPGSTKVYRT
Subjt:  MGEVAMSVGKLGSLVAHFQVRPILIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKYDRLCVPSDQTIKDQISEEAHSSAYAMHPGSTKVYRT

Query:  LKKHYWWPGMKREIADYVAKCLICQQ----------------------EHVTMDFLFGLPRTTNGNDGIWVIVDRLTKTARFLPVKLTFTLDKLAKLYVD
        LKKHYWWPG+KREIADYVAKCLICQQ                      EHVTMDF  GLPRTTNGNDGIWVIVDRLTKTARFLPVK+TFTLDKLAKLYVD
Subjt:  LKKHYWWPGMKREIADYVAKCLICQQ----------------------EHVTMDFLFGLPRTTNGNDGIWVIVDRLTKTARFLPVKLTFTLDKLAKLYVD

Query:  KIVSAYGAPISIVFDRDFRFTSKFWPSLQQALGTKLHFSTTFHPQTDGQSERTIQTLEDMLRACALQFKGNWDAHLSLMEFAYNNSFHSSNGVAPYEALH
        KIVSAYGAPISIV DRD +FTSKFWPSLQQAL                          DMLRACALQFKGNWDAHLSLMEFAYNNSFHSS G+A YEAL+
Subjt:  KIVSAYGAPISIVFDRDFRFTSKFWPSLQQALGTKLHFSTTFHPQTDGQSERTIQTLEDMLRACALQFKGNWDAHLSLMEFAYNNSFHSSNGVAPYEALH

Query:  GRRCRTPVWWDEVGERKLVGPELVQITSENVKIIRERLKTAQDRQKSYADKRRQDLEFEV----------------------------------------
        GR CRT V W+EVGERKLVG ELVQITSENVKIIRERLKTAQDR+KSYADKRR+DLEFEV                                        
Subjt:  GRRCRTPVWWDEVGERKLVGPELVQITSENVKIIRERLKTAQDRQKSYADKRRQDLEFEV----------------------------------------

Query:  -----------EFMNVFHVSMPCKYVPDPSHILKAQPVHLKENLSYKEEQIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWETKQAMKAQYPHLFTSS
                      +VFHVSM  KYVPDP+HIL+AQPVHLKENLSY+EE IQILDKKEQV+RNK+IPLVKVLWRNHNTEEATWET+QAMKAQYP+LFTSS
Subjt:  -----------EFMNVFHVSMPCKYVPDPSHILKAQPVHLKENLSYKEEQIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWETKQAMKAQYPHLFTSS

Query:  P
        P
Subjt:  P

A0A5D3D2Y2 Uncharacterized protein4.5e-16296.61Show/hide
Query:  MGEVAMSVGKLGSLVAHFQVRPILIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKYDRLCVPSDQTIKDQISEEAHSSAYAMHPGSTKVYRT
        MGEVAMSVGKLGSLVAHFQVRPILIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKYDRLCVPSDQTIKDQISEEAHSSAYAMHPGSTKVYRT
Subjt:  MGEVAMSVGKLGSLVAHFQVRPILIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKYDRLCVPSDQTIKDQISEEAHSSAYAMHPGSTKVYRT

Query:  LKKHYWWPGMKREIADYVAKCLICQQEHVTMDFLFGLPRTTNGNDGIWVIVDRLTKTARFLPVKLTFTLDKLAKLYVDKIVSAYGAPISIVFDRDFRFTS
        LKKHYWWPGMKREIADY         EHVTMDFLFGLPRTTNGNDGIWVIVDRLTKTARFLPVKLTFTLDKLAKLYVDKIVSAYGAPISIVFD+DFRFTS
Subjt:  LKKHYWWPGMKREIADYVAKCLICQQEHVTMDFLFGLPRTTNGNDGIWVIVDRLTKTARFLPVKLTFTLDKLAKLYVDKIVSAYGAPISIVFDRDFRFTS

Query:  KFWPSLQQALGTKLHFSTTFHPQTDGQSERTIQTLEDMLRACALQFKGNWDAHLSLMEFAYNNSFHSSNGVAPYEALHGRRCRTPVWWDEVGERK
        KFWPSLQQALGTKLHFSTTFHPQTDGQSERTIQTLEDMLRACALQFKGNWDAHLSLMEFAYNNSFHSSNGVAPYEALHGRRCRTPVWWDEVGERK
Subjt:  KFWPSLQQALGTKLHFSTTFHPQTDGQSERTIQTLEDMLRACALQFKGNWDAHLSLMEFAYNNSFHSSNGVAPYEALHGRRCRTPVWWDEVGERK

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein1.1e-3525.82Show/hide
Query:  DRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKYDRLCVPSDQTIKDQISEEAHSSAYAMHPGSTKVYRTLKKHYWWPGMKREIADYVAKCLICQ
        ++++    +D +L  L     +    N  L+    +   D++ +P+D  +   I ++ H     +HPG   +   + + + W G++++I +YV  C  CQ
Subjt:  DRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKYDRLCVPSDQTIKDQISEEAHSSAYAMHPGSTKVYRTLKKHYWWPGMKREIADYVAKCLICQ

Query:  ----------------------QEHVTMDFLFGLPRTTNGNDGIWVIVDRLTKTARFLPVKLTFTLDKLAKLYVDKIVSAYGAPISIVFDRDFRFTSKFW
                               E ++MDF+  LP  ++G + ++V+VDR +K A  +P   + T ++ A+++  ++++ +G P  I+ D D  FTS+ W
Subjt:  ----------------------QEHVTMDFLFGLPRTTNGNDGIWVIVDRLTKTARFLPVKLTFTLDKLAKLYVDKIVSAYGAPISIVFDRDFRFTSKFW

Query:  PSLQQALGTKLHFSTTFHPQTDGQSERTIQTLEDMLRACALQFKGNWDAHLSLMEFAYNNSFHSSNGVAPYEALHG-----RRCRTPVWWDEVGERKLVG
                  + FS  + PQTDGQ+ERT QT+E +LR         W  H+SL++ +YNN+ HS+  + P+E +H           P + D+  E     
Subjt:  PSLQQALGTKLHFSTTFHPQTDGQSERTIQTLEDMLRACALQFKGNWDAHLSLMEFAYNNSFHSSNGVAPYEALHG-----RRCRTPVWWDEVGERKLVG

Query:  PELVQITSENVKIIRERLKTAQDRQKSYADKRRQDLE
            Q T +  + ++E L T   + K Y D + Q++E
Subjt:  PELVQITSENVKIIRERLKTAQDRQKSYADKRRQDLE

P0CT35 Transposon Tf2-2 polyprotein1.1e-3525.82Show/hide
Query:  DRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKYDRLCVPSDQTIKDQISEEAHSSAYAMHPGSTKVYRTLKKHYWWPGMKREIADYVAKCLICQ
        ++++    +D +L  L     +    N  L+    +   D++ +P+D  +   I ++ H     +HPG   +   + + + W G++++I +YV  C  CQ
Subjt:  DRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKYDRLCVPSDQTIKDQISEEAHSSAYAMHPGSTKVYRTLKKHYWWPGMKREIADYVAKCLICQ

Query:  ----------------------QEHVTMDFLFGLPRTTNGNDGIWVIVDRLTKTARFLPVKLTFTLDKLAKLYVDKIVSAYGAPISIVFDRDFRFTSKFW
                               E ++MDF+  LP  ++G + ++V+VDR +K A  +P   + T ++ A+++  ++++ +G P  I+ D D  FTS+ W
Subjt:  ----------------------QEHVTMDFLFGLPRTTNGNDGIWVIVDRLTKTARFLPVKLTFTLDKLAKLYVDKIVSAYGAPISIVFDRDFRFTSKFW

Query:  PSLQQALGTKLHFSTTFHPQTDGQSERTIQTLEDMLRACALQFKGNWDAHLSLMEFAYNNSFHSSNGVAPYEALHG-----RRCRTPVWWDEVGERKLVG
                  + FS  + PQTDGQ+ERT QT+E +LR         W  H+SL++ +YNN+ HS+  + P+E +H           P + D+  E     
Subjt:  PSLQQALGTKLHFSTTFHPQTDGQSERTIQTLEDMLRACALQFKGNWDAHLSLMEFAYNNSFHSSNGVAPYEALHG-----RRCRTPVWWDEVGERKLVG

Query:  PELVQITSENVKIIRERLKTAQDRQKSYADKRRQDLE
            Q T +  + ++E L T   + K Y D + Q++E
Subjt:  PELVQITSENVKIIRERLKTAQDRQKSYADKRRQDLE

P0CT36 Transposon Tf2-3 polyprotein1.1e-3525.82Show/hide
Query:  DRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKYDRLCVPSDQTIKDQISEEAHSSAYAMHPGSTKVYRTLKKHYWWPGMKREIADYVAKCLICQ
        ++++    +D +L  L     +    N  L+    +   D++ +P+D  +   I ++ H     +HPG   +   + + + W G++++I +YV  C  CQ
Subjt:  DRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKYDRLCVPSDQTIKDQISEEAHSSAYAMHPGSTKVYRTLKKHYWWPGMKREIADYVAKCLICQ

Query:  ----------------------QEHVTMDFLFGLPRTTNGNDGIWVIVDRLTKTARFLPVKLTFTLDKLAKLYVDKIVSAYGAPISIVFDRDFRFTSKFW
                               E ++MDF+  LP  ++G + ++V+VDR +K A  +P   + T ++ A+++  ++++ +G P  I+ D D  FTS+ W
Subjt:  ----------------------QEHVTMDFLFGLPRTTNGNDGIWVIVDRLTKTARFLPVKLTFTLDKLAKLYVDKIVSAYGAPISIVFDRDFRFTSKFW

Query:  PSLQQALGTKLHFSTTFHPQTDGQSERTIQTLEDMLRACALQFKGNWDAHLSLMEFAYNNSFHSSNGVAPYEALHG-----RRCRTPVWWDEVGERKLVG
                  + FS  + PQTDGQ+ERT QT+E +LR         W  H+SL++ +YNN+ HS+  + P+E +H           P + D+  E     
Subjt:  PSLQQALGTKLHFSTTFHPQTDGQSERTIQTLEDMLRACALQFKGNWDAHLSLMEFAYNNSFHSSNGVAPYEALHG-----RRCRTPVWWDEVGERKLVG

Query:  PELVQITSENVKIIRERLKTAQDRQKSYADKRRQDLE
            Q T +  + ++E L T   + K Y D + Q++E
Subjt:  PELVQITSENVKIIRERLKTAQDRQKSYADKRRQDLE

P0CT41 Transposon Tf2-12 polyprotein1.1e-3525.82Show/hide
Query:  DRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKYDRLCVPSDQTIKDQISEEAHSSAYAMHPGSTKVYRTLKKHYWWPGMKREIADYVAKCLICQ
        ++++    +D +L  L     +    N  L+    +   D++ +P+D  +   I ++ H     +HPG   +   + + + W G++++I +YV  C  CQ
Subjt:  DRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKYDRLCVPSDQTIKDQISEEAHSSAYAMHPGSTKVYRTLKKHYWWPGMKREIADYVAKCLICQ

Query:  ----------------------QEHVTMDFLFGLPRTTNGNDGIWVIVDRLTKTARFLPVKLTFTLDKLAKLYVDKIVSAYGAPISIVFDRDFRFTSKFW
                               E ++MDF+  LP  ++G + ++V+VDR +K A  +P   + T ++ A+++  ++++ +G P  I+ D D  FTS+ W
Subjt:  ----------------------QEHVTMDFLFGLPRTTNGNDGIWVIVDRLTKTARFLPVKLTFTLDKLAKLYVDKIVSAYGAPISIVFDRDFRFTSKFW

Query:  PSLQQALGTKLHFSTTFHPQTDGQSERTIQTLEDMLRACALQFKGNWDAHLSLMEFAYNNSFHSSNGVAPYEALHG-----RRCRTPVWWDEVGERKLVG
                  + FS  + PQTDGQ+ERT QT+E +LR         W  H+SL++ +YNN+ HS+  + P+E +H           P + D+  E     
Subjt:  PSLQQALGTKLHFSTTFHPQTDGQSERTIQTLEDMLRACALQFKGNWDAHLSLMEFAYNNSFHSSNGVAPYEALHG-----RRCRTPVWWDEVGERKLVG

Query:  PELVQITSENVKIIRERLKTAQDRQKSYADKRRQDLE
            Q T +  + ++E L T   + K Y D + Q++E
Subjt:  PELVQITSENVKIIRERLKTAQDRQKSYADKRRQDLE

Q9UR07 Transposon Tf2-11 polyprotein1.1e-3525.82Show/hide
Query:  DRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKYDRLCVPSDQTIKDQISEEAHSSAYAMHPGSTKVYRTLKKHYWWPGMKREIADYVAKCLICQ
        ++++    +D +L  L     +    N  L+    +   D++ +P+D  +   I ++ H     +HPG   +   + + + W G++++I +YV  C  CQ
Subjt:  DRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKYDRLCVPSDQTIKDQISEEAHSSAYAMHPGSTKVYRTLKKHYWWPGMKREIADYVAKCLICQ

Query:  ----------------------QEHVTMDFLFGLPRTTNGNDGIWVIVDRLTKTARFLPVKLTFTLDKLAKLYVDKIVSAYGAPISIVFDRDFRFTSKFW
                               E ++MDF+  LP  ++G + ++V+VDR +K A  +P   + T ++ A+++  ++++ +G P  I+ D D  FTS+ W
Subjt:  ----------------------QEHVTMDFLFGLPRTTNGNDGIWVIVDRLTKTARFLPVKLTFTLDKLAKLYVDKIVSAYGAPISIVFDRDFRFTSKFW

Query:  PSLQQALGTKLHFSTTFHPQTDGQSERTIQTLEDMLRACALQFKGNWDAHLSLMEFAYNNSFHSSNGVAPYEALHG-----RRCRTPVWWDEVGERKLVG
                  + FS  + PQTDGQ+ERT QT+E +LR         W  H+SL++ +YNN+ HS+  + P+E +H           P + D+  E     
Subjt:  PSLQQALGTKLHFSTTFHPQTDGQSERTIQTLEDMLRACALQFKGNWDAHLSLMEFAYNNSFHSSNGVAPYEALHG-----RRCRTPVWWDEVGERKLVG

Query:  PELVQITSENVKIIRERLKTAQDRQKSYADKRRQDLE
            Q T +  + ++E L T   + K Y D + Q++E
Subjt:  PELVQITSENVKIIRERLKTAQDRQKSYADKRRQDLE

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGAAGTCGCTATGTCAGTGGGCAAGTTGGGAAGTTTAGTTGCACATTTCCAAGTGCGACCTATTTTGATAGACCGTATTATTAAAGCCCAGCTAGATGATGCAAG
GCTGAGGAAGTTAGCAGAAGAGGTAAGACAAAACCAAAGATTGAATTATAGCTTGAGGGGTGATGGTGCCTTGATGAAATATGATAGGTTATGTGTACCCAGTGACCAAA
CGATAAAAGATCAAATTTCAGAGGAAGCACATAGTTCTGCATATGCAATGCATCCTGGTAGTACGAAAGTGTATAGAACTTTGAAGAAACACTATTGGTGGCCAGGTATG
AAGCGTGAGATTGCAGATTATGTGGCTAAGTGTTTGATATGTCAGCAAGAGCATGTTACCATGGACTTTCTTTTTGGACTACCCCGCACAACGAATGGGAATGATGGCAT
TTGGGTGATAGTTGACAGACTTACGAAGACAGCAAGATTTCTACCAGTCAAGCTCACTTTCACTTTGGATAAGCTGGCCAAGTTGTATGTTGATAAAATTGTGAGTGCGT
ATGGAGCCCCAATATCTATTGTGTTTGATCGAGACTTCAGGTTTACCTCAAAGTTTTGGCCAAGTTTACAACAAGCCTTAGGTACCAAGTTACATTTTAGTACCACATTT
CATCCTCAGACAGATGGCCAGTCAGAACGAACCATTCAAACTTTGGAAGATATGCTTAGAGCTTGTGCTTTGCAGTTTAAGGGTAATTGGGATGCTCATCTATCCTTGAT
GGAATTTGCATATAATAATAGTTTCCATTCAAGTAATGGAGTGGCACCATATGAGGCTTTGCATGGTAGACGTTGTAGAACTCCCGTGTGGTGGGATGAAGTTGGAGAAA
GGAAGTTAGTGGGGCCAGAATTAGTACAAATCACTTCAGAGAATGTGAAGATTATTAGGGAAAGATTGAAAACAGCCCAGGATCGTCAAAAAAGTTATGCAGATAAGCGC
CGACAAGATTTAGAATTTGAAGTTGAATTCATGAATGTGTTTCATGTGTCAATGCCGTGTAAGTACGTCCCAGATCCATCTCATATTCTTAAAGCACAACCAGTTCATTT
GAAAGAAAACTTGTCCTACAAAGAGGAGCAAATACAAATTCTTGACAAAAAAGAACAAGTGCTAAGGAACAAAGTGATCCCATTAGTTAAGGTTCTTTGGAGGAACCATA
ATACTGAAGAAGCAACGTGGGAAACGAAGCAAGCAATGAAGGCGCAATACCCACATCTTTTCACATCATCACCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGAAGTCGCTATGTCAGTGGGCAAGTTGGGAAGTTTAGTTGCACATTTCCAAGTGCGACCTATTTTGATAGACCGTATTATTAAAGCCCAGCTAGATGATGCAAG
GCTGAGGAAGTTAGCAGAAGAGGTAAGACAAAACCAAAGATTGAATTATAGCTTGAGGGGTGATGGTGCCTTGATGAAATATGATAGGTTATGTGTACCCAGTGACCAAA
CGATAAAAGATCAAATTTCAGAGGAAGCACATAGTTCTGCATATGCAATGCATCCTGGTAGTACGAAAGTGTATAGAACTTTGAAGAAACACTATTGGTGGCCAGGTATG
AAGCGTGAGATTGCAGATTATGTGGCTAAGTGTTTGATATGTCAGCAAGAGCATGTTACCATGGACTTTCTTTTTGGACTACCCCGCACAACGAATGGGAATGATGGCAT
TTGGGTGATAGTTGACAGACTTACGAAGACAGCAAGATTTCTACCAGTCAAGCTCACTTTCACTTTGGATAAGCTGGCCAAGTTGTATGTTGATAAAATTGTGAGTGCGT
ATGGAGCCCCAATATCTATTGTGTTTGATCGAGACTTCAGGTTTACCTCAAAGTTTTGGCCAAGTTTACAACAAGCCTTAGGTACCAAGTTACATTTTAGTACCACATTT
CATCCTCAGACAGATGGCCAGTCAGAACGAACCATTCAAACTTTGGAAGATATGCTTAGAGCTTGTGCTTTGCAGTTTAAGGGTAATTGGGATGCTCATCTATCCTTGAT
GGAATTTGCATATAATAATAGTTTCCATTCAAGTAATGGAGTGGCACCATATGAGGCTTTGCATGGTAGACGTTGTAGAACTCCCGTGTGGTGGGATGAAGTTGGAGAAA
GGAAGTTAGTGGGGCCAGAATTAGTACAAATCACTTCAGAGAATGTGAAGATTATTAGGGAAAGATTGAAAACAGCCCAGGATCGTCAAAAAAGTTATGCAGATAAGCGC
CGACAAGATTTAGAATTTGAAGTTGAATTCATGAATGTGTTTCATGTGTCAATGCCGTGTAAGTACGTCCCAGATCCATCTCATATTCTTAAAGCACAACCAGTTCATTT
GAAAGAAAACTTGTCCTACAAAGAGGAGCAAATACAAATTCTTGACAAAAAAGAACAAGTGCTAAGGAACAAAGTGATCCCATTAGTTAAGGTTCTTTGGAGGAACCATA
ATACTGAAGAAGCAACGTGGGAAACGAAGCAAGCAATGAAGGCGCAATACCCACATCTTTTCACATCATCACCTTGA
Protein sequenceShow/hide protein sequence
MGEVAMSVGKLGSLVAHFQVRPILIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKYDRLCVPSDQTIKDQISEEAHSSAYAMHPGSTKVYRTLKKHYWWPGM
KREIADYVAKCLICQQEHVTMDFLFGLPRTTNGNDGIWVIVDRLTKTARFLPVKLTFTLDKLAKLYVDKIVSAYGAPISIVFDRDFRFTSKFWPSLQQALGTKLHFSTTF
HPQTDGQSERTIQTLEDMLRACALQFKGNWDAHLSLMEFAYNNSFHSSNGVAPYEALHGRRCRTPVWWDEVGERKLVGPELVQITSENVKIIRERLKTAQDRQKSYADKR
RQDLEFEVEFMNVFHVSMPCKYVPDPSHILKAQPVHLKENLSYKEEQIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWETKQAMKAQYPHLFTSSP