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IVF0018225 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0018225
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionhippocampus abundant transcript 1 protein-like
Genome locationchr03:22676545..22677186
RNA-Seq ExpressionIVF0018225
SyntenyIVF0018225
Gene Ontology termsGO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0022857 - transmembrane transporter activity (molecular function)
InterPro domainsIPR036259 - MFS transporter superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064854.1 tetracycline resistance protein, class A-like isoform X1 [Cucumis melo var. makuwa]3.12e-81100Show/hide
Query:  MEEMLKLTHLLVTVFLYTFATMTAFPAIPDVTMSALCPGRDECSLAIYFTGFQQVVTGVGALLMVPLLGNLSDKFGRKTVLTIPLILNVIPLGILGYGRS
        MEEMLKLTHLLVTVFLYTFATMTAFPAIPDVTMSALCPGRDECSLAIYFTGFQQVVTGVGALLMVPLLGNLSDKFGRKTVLTIPLILNVIPLGILGYGRS
Subjt:  MEEMLKLTHLLVTVFLYTFATMTAFPAIPDVTMSALCPGRDECSLAIYFTGFQQVVTGVGALLMVPLLGNLSDKFGRKTVLTIPLILNVIPLGILGYGRS

Query:  RDLFYIYFVFKCVTSIVCEGSVQCLAVAYA
        RDLFYIYFVFKCVTSIVCEGSVQCLAVAYA
Subjt:  RDLFYIYFVFKCVTSIVCEGSVQCLAVAYA

XP_008445315.1 PREDICTED: tetracycline resistance protein, class A-like isoform X1 [Cucumis melo]1.33e-81100Show/hide
Query:  MEEMLKLTHLLVTVFLYTFATMTAFPAIPDVTMSALCPGRDECSLAIYFTGFQQVVTGVGALLMVPLLGNLSDKFGRKTVLTIPLILNVIPLGILGYGRS
        MEEMLKLTHLLVTVFLYTFATMTAFPAIPDVTMSALCPGRDECSLAIYFTGFQQVVTGVGALLMVPLLGNLSDKFGRKTVLTIPLILNVIPLGILGYGRS
Subjt:  MEEMLKLTHLLVTVFLYTFATMTAFPAIPDVTMSALCPGRDECSLAIYFTGFQQVVTGVGALLMVPLLGNLSDKFGRKTVLTIPLILNVIPLGILGYGRS

Query:  RDLFYIYFVFKCVTSIVCEGSVQCLAVAYA
        RDLFYIYFVFKCVTSIVCEGSVQCLAVAYA
Subjt:  RDLFYIYFVFKCVTSIVCEGSVQCLAVAYA

XP_031736457.1 hippocampus abundant transcript 1 protein [Cucumis sativus]1.76e-7691.54Show/hide
Query:  MEEMLKLTHLLVTVFLYTFATMTAFPAIPDVTMSALCPGRDECSLAIYFTGFQQVVTGVGALLMVPLLGNLSDKFGRKTVLTIPLILNVIPLGILGYGRS
        MEE LKLTHLLVTVFLYTFATMTAFPAIPD+TMSALCP +DECSL IYFTGFQQVVTG+GALLM+PLLGNLSD+FGRKTVLTIPL+LN+IPLGILGYGRS
Subjt:  MEEMLKLTHLLVTVFLYTFATMTAFPAIPDVTMSALCPGRDECSLAIYFTGFQQVVTGVGALLMVPLLGNLSDKFGRKTVLTIPLILNVIPLGILGYGRS

Query:  RDLFYIYFVFKCVTSIVCEGSVQCLAVAYA
        R+LFYIYFVFKCVTSIVCEGSVQCLAVAYA
Subjt:  RDLFYIYFVFKCVTSIVCEGSVQCLAVAYA

XP_038886440.1 hippocampus abundant transcript 1 protein-like isoform X2 [Benincasa hispida]1.34e-6985.38Show/hide
Query:  MEEMLKLTHLLVTVFLYTFATMTAFPAIPDVTMSALCPGRDECSLAIYFTGFQQVVTGVGALLMVPLLGNLSDKFGRKTVLTIPLILNVIPLGILGYGRS
        MEE+ KL+HLLVTVFLYTFATM   PAI DVTMSALCPG+DECSLAIYFTGFQQVVTG+GALLM+PLLGNLSDKFGRKT+LTIP++L VIPLGILGYGRS
Subjt:  MEEMLKLTHLLVTVFLYTFATMTAFPAIPDVTMSALCPGRDECSLAIYFTGFQQVVTGVGALLMVPLLGNLSDKFGRKTVLTIPLILNVIPLGILGYGRS

Query:  RDLFYIYFVFKCVTSIVCEGSVQCLAVAYA
        RDLFYIYFV KCVTS +CEGSVQCLA+ YA
Subjt:  RDLFYIYFVFKCVTSIVCEGSVQCLAVAYA

XP_038886441.1 hippocampus abundant transcript 1 protein-like isoform X3 [Benincasa hispida]8.32e-7085.38Show/hide
Query:  MEEMLKLTHLLVTVFLYTFATMTAFPAIPDVTMSALCPGRDECSLAIYFTGFQQVVTGVGALLMVPLLGNLSDKFGRKTVLTIPLILNVIPLGILGYGRS
        MEE+ KL+HLLVTVFLYTFATM   PAI DVTMSALCPG+DECSLAIYFTGFQQVVTG+GALLM+PLLGNLSDKFGRKT+LTIP++L VIPLGILGYGRS
Subjt:  MEEMLKLTHLLVTVFLYTFATMTAFPAIPDVTMSALCPGRDECSLAIYFTGFQQVVTGVGALLMVPLLGNLSDKFGRKTVLTIPLILNVIPLGILGYGRS

Query:  RDLFYIYFVFKCVTSIVCEGSVQCLAVAYA
        RDLFYIYFV KCVTS +CEGSVQCLA+ YA
Subjt:  RDLFYIYFVFKCVTSIVCEGSVQCLAVAYA

TrEMBL top hitse value%identityAlignment
A0A0A0LKE2 MFS domain-containing protein9.7e-6391.11Show/hide
Query:  MEEMLKLTHLLVTVFLYTFATMTAFPAIPDVTMSALCPGRDECSLAIYFTGFQQVVTGVGALLMVPLLGNLSDKFGRKTVLTIPLILNVIPLGILGYGRS
        MEE LKLTHLLVTVFLYTFATMTAFPAIPD+TMSALCP +DECSL IYFTGFQQVVTG+GALLM+PLLGNLSD+FGRKTVLTIPL+LN+IPLGILGYGRS
Subjt:  MEEMLKLTHLLVTVFLYTFATMTAFPAIPDVTMSALCPGRDECSLAIYFTGFQQVVTGVGALLMVPLLGNLSDKFGRKTVLTIPLILNVIPLGILGYGRS

Query:  RDLFYIYFVFKCVTSIVCEGSVQCLAVAYAVIKKL
        R+LFYIYFVFKCVTSIVCEGSVQCLAVAYAVI KL
Subjt:  RDLFYIYFVFKCVTSIVCEGSVQCLAVAYAVIKKL

A0A1S3BCD9 hippocampus abundant transcript 1 protein-like2.8e-5484.73Show/hide
Query:  MEEML-KLTHLLVTVFLYTFATMTAFPAIPDVTMSALCPGRDECSLAIYFTGFQQVVTGVGALLMVPLLGNLSDKFGRKTVLTIPLILNVIPLGILGYGR
        MEEM+ KL+HLLVT+FLYTFATM   PAI DVTMSALCPG+DECSLAIYFTGFQQVVTG+GALL++PLLGNLSDK GRKT+LTIP+IL V+PLGILGYGR
Subjt:  MEEML-KLTHLLVTVFLYTFATMTAFPAIPDVTMSALCPGRDECSLAIYFTGFQQVVTGVGALLMVPLLGNLSDKFGRKTVLTIPLILNVIPLGILGYGR

Query:  SRDLFYIYFVFKCVTSIVCEGSVQCLAVAYA
        SR LFY+YFV KCVTSIVCEGSVQCLAVAYA
Subjt:  SRDLFYIYFVFKCVTSIVCEGSVQCLAVAYA

A0A1S3BD51 tetracycline resistance protein, class A-like isoform X17.9e-65100Show/hide
Query:  MEEMLKLTHLLVTVFLYTFATMTAFPAIPDVTMSALCPGRDECSLAIYFTGFQQVVTGVGALLMVPLLGNLSDKFGRKTVLTIPLILNVIPLGILGYGRS
        MEEMLKLTHLLVTVFLYTFATMTAFPAIPDVTMSALCPGRDECSLAIYFTGFQQVVTGVGALLMVPLLGNLSDKFGRKTVLTIPLILNVIPLGILGYGRS
Subjt:  MEEMLKLTHLLVTVFLYTFATMTAFPAIPDVTMSALCPGRDECSLAIYFTGFQQVVTGVGALLMVPLLGNLSDKFGRKTVLTIPLILNVIPLGILGYGRS

Query:  RDLFYIYFVFKCVTSIVCEGSVQCLAVAYA
        RDLFYIYFVFKCVTSIVCEGSVQCLAVAYA
Subjt:  RDLFYIYFVFKCVTSIVCEGSVQCLAVAYA

A0A5A7V9L6 Hippocampus abundant transcript 1 protein-like2.8e-5484.73Show/hide
Query:  MEEML-KLTHLLVTVFLYTFATMTAFPAIPDVTMSALCPGRDECSLAIYFTGFQQVVTGVGALLMVPLLGNLSDKFGRKTVLTIPLILNVIPLGILGYGR
        MEEM+ KL+HLLVT+FLYTFATM   PAI DVTMSALCPG+DECSLAIYFTGFQQVVTG+GALL++PLLGNLSDK GRKT+LTIP+IL V+PLGILGYGR
Subjt:  MEEML-KLTHLLVTVFLYTFATMTAFPAIPDVTMSALCPGRDECSLAIYFTGFQQVVTGVGALLMVPLLGNLSDKFGRKTVLTIPLILNVIPLGILGYGR

Query:  SRDLFYIYFVFKCVTSIVCEGSVQCLAVAYA
        SR LFY+YFV KCVTSIVCEGSVQCLAVAYA
Subjt:  SRDLFYIYFVFKCVTSIVCEGSVQCLAVAYA

A0A5A7VC62 Tetracycline resistance protein, class A-like isoform X17.9e-65100Show/hide
Query:  MEEMLKLTHLLVTVFLYTFATMTAFPAIPDVTMSALCPGRDECSLAIYFTGFQQVVTGVGALLMVPLLGNLSDKFGRKTVLTIPLILNVIPLGILGYGRS
        MEEMLKLTHLLVTVFLYTFATMTAFPAIPDVTMSALCPGRDECSLAIYFTGFQQVVTGVGALLMVPLLGNLSDKFGRKTVLTIPLILNVIPLGILGYGRS
Subjt:  MEEMLKLTHLLVTVFLYTFATMTAFPAIPDVTMSALCPGRDECSLAIYFTGFQQVVTGVGALLMVPLLGNLSDKFGRKTVLTIPLILNVIPLGILGYGRS

Query:  RDLFYIYFVFKCVTSIVCEGSVQCLAVAYA
        RDLFYIYFVFKCVTSIVCEGSVQCLAVAYA
Subjt:  RDLFYIYFVFKCVTSIVCEGSVQCLAVAYA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G16970.1 Major facilitator superfamily protein6.7e-2446.73Show/hide
Query:  KLTHLLVTVFLYTFATMTAFPAIPDVTMSALCPGRDE-CSLAIYFTGFQQVVTGVGALLMVPLLGNLSDKFGRKTVLTIPLILNVIPLGILGYGRSRDLF
        +L HLL TVFL  F+     P + DVT++A+C G +E CSLA+Y TG +QV  G+G ++M+P++GNLSD++G KT+LT+P+ L+++P  IL Y R  + F
Subjt:  KLTHLLVTVFLYTFATMTAFPAIPDVTMSALCPGRDE-CSLAIYFTGFQQVVTGVGALLMVPLLGNLSDKFGRKTVLTIPLILNVIPLGILGYGRSRDLF

Query:  YIYFVFK
        Y +++ K
Subjt:  YIYFVFK

AT2G16980.1 Major facilitator superfamily protein2.8e-3049.6Show/hide
Query:  KLTHLLVTVFLYTFATMTAFPAIPDVTMSALCPGRDE-CSLAIYFTGFQQVVTGVGALLMVPLLGNLSDKFGRKTVLTIPLILNVIPLGILGYGRSRDLF
        +L HLLVTVFL   A     P + DVT++A+C G D+ CSLA+Y TG QQV  G+G ++M+P++GNLSD++G K +LT+P+ L+V+P  ILGY R  + F
Subjt:  KLTHLLVTVFLYTFATMTAFPAIPDVTMSALCPGRDE-CSLAIYFTGFQQVVTGVGALLMVPLLGNLSDKFGRKTVLTIPLILNVIPLGILGYGRSRDLF

Query:  YIYFVFKCVTSIVCEGSVQCLAVAY
        Y ++V K +  +VC+G++ CLA AY
Subjt:  YIYFVFKCVTSIVCEGSVQCLAVAY

AT2G16980.2 Major facilitator superfamily protein2.8e-3049.6Show/hide
Query:  KLTHLLVTVFLYTFATMTAFPAIPDVTMSALCPGRDE-CSLAIYFTGFQQVVTGVGALLMVPLLGNLSDKFGRKTVLTIPLILNVIPLGILGYGRSRDLF
        +L HLLVTVFL   A     P + DVT++A+C G D+ CSLA+Y TG QQV  G+G ++M+P++GNLSD++G K +LT+P+ L+V+P  ILGY R  + F
Subjt:  KLTHLLVTVFLYTFATMTAFPAIPDVTMSALCPGRDE-CSLAIYFTGFQQVVTGVGALLMVPLLGNLSDKFGRKTVLTIPLILNVIPLGILGYGRSRDLF

Query:  YIYFVFKCVTSIVCEGSVQCLAVAY
        Y ++V K +  +VC+G++ CLA AY
Subjt:  YIYFVFKCVTSIVCEGSVQCLAVAY

AT2G16990.1 Major facilitator superfamily protein5.5e-3451.97Show/hide
Query:  LTHLLVTVFLYTFATMTAFPAIPDVTMSALCPGRDE-CSLAIYFTGFQQVVTGVGALLMVPLLGNLSDKFGRKTVLTIPLILNVIPLGILGYGRSRDLFY
        L H+L TVFL  FA     P I DVT++A+C G D+ CSLA+Y TGFQQV  G+G ++M+P++GNLSD++G KT+LT+P+ L+++P  ILGY R    FY
Subjt:  LTHLLVTVFLYTFATMTAFPAIPDVTMSALCPGRDE-CSLAIYFTGFQQVVTGVGALLMVPLLGNLSDKFGRKTVLTIPLILNVIPLGILGYGRSRDLFY

Query:  IYFVFKCVTSIVCEGSVQCLAVAYAVI
        ++++ K +TS+VCEG+V CLA AY  +
Subjt:  IYFVFKCVTSIVCEGSVQCLAVAYAVI

AT2G16990.2 Major facilitator superfamily protein5.5e-3451.97Show/hide
Query:  LTHLLVTVFLYTFATMTAFPAIPDVTMSALCPGRDE-CSLAIYFTGFQQVVTGVGALLMVPLLGNLSDKFGRKTVLTIPLILNVIPLGILGYGRSRDLFY
        L H+L TVFL  FA     P I DVT++A+C G D+ CSLA+Y TGFQQV  G+G ++M+P++GNLSD++G KT+LT+P+ L+++P  ILGY R    FY
Subjt:  LTHLLVTVFLYTFATMTAFPAIPDVTMSALCPGRDE-CSLAIYFTGFQQVVTGVGALLMVPLLGNLSDKFGRKTVLTIPLILNVIPLGILGYGRSRDLFY

Query:  IYFVFKCVTSIVCEGSVQCLAVAYAVI
        ++++ K +TS+VCEG+V CLA AY  +
Subjt:  IYFVFKCVTSIVCEGSVQCLAVAYAVI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAAATGTTAAAGCTAACCCATTTGTTGGTCACAGTATTTCTATATACTTTTGCAACCATGACGGCCTTTCCTGCCATTCCGGACGTCACCATGTCCGCTCTTTG
TCCCGGTCGAGACGAATGTTCTCTCGCTATTTACTTCACTGGCTTTCAACAAGTCGTGACTGGAGTTGGTGCATTGTTAATGGTGCCGTTGCTTGGAAATCTCTCCGATA
AGTTTGGGAGGAAGACTGTTCTCACCATTCCCTTGATTCTCAACGTAATTCCACTGGGGATATTGGGATATGGGAGATCGAGGGATTTGTTCTATATTTATTTTGTGTTC
AAGTGTGTGACAAGCATCGTTTGTGAAGGGAGCGTTCAGTGCTTGGCTGTTGCTTATGCGGTAATTAAGAAACTTTAA
mRNA sequenceShow/hide mRNA sequence
AGAAGAAGCTACAGACAGGGGAGACCAAAAAAGATCAATGGAGGAAATGTTAAAGCTAACCCATTTGTTGGTCACAGTATTTCTATATACTTTTGCAACCATGACGGCCT
TTCCTGCCATTCCGGACGTCACCATGTCCGCTCTTTGTCCCGGTCGAGACGAATGTTCTCTCGCTATTTACTTCACTGGCTTTCAACAAGTCGTGACTGGAGTTGGTGCA
TTGTTAATGGTGCCGTTGCTTGGAAATCTCTCCGATAAGTTTGGGAGGAAGACTGTTCTCACCATTCCCTTGATTCTCAACGTAATTCCACTGGGGATATTGGGATATGG
GAGATCGAGGGATTTGTTCTATATTTATTTTGTGTTCAAGTGTGTGACAAGCATCGTTTGTGAAGGGAGCGTTCAGTGCTTGGCTGTTGCTTATGCGGTAATTAAGAAAC
TTTAA
Protein sequenceShow/hide protein sequence
MEEMLKLTHLLVTVFLYTFATMTAFPAIPDVTMSALCPGRDECSLAIYFTGFQQVVTGVGALLMVPLLGNLSDKFGRKTVLTIPLILNVIPLGILGYGRSRDLFYIYFVF
KCVTSIVCEGSVQCLAVAYAVIKKL