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IVF0018256 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0018256
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr04:23785310..23785498
RNA-Seq ExpressionIVF0018256
SyntenyIVF0018256
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041105.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]8.28e-2683.87Show/hide
Query:  MADITVEATMTEMERKVNFLMKVVEERDHEITISREQMRTHETVESSQTPIVKATDKGKNVV
        MADIT +A M EMERK+NFLMKVVEERDHEIT  REQ+RT ET ESSQTPIVKATDKGKNVV
Subjt:  MADITVEATMTEMERKVNFLMKVVEERDHEITISREQMRTHETVESSQTPIVKATDKGKNVV

KAA0048603.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]5.53e-2685.48Show/hide
Query:  MADITVEATMTEMERKVNFLMKVVEERDHEITISREQMRTHETVESSQTPIVKATDKGKNVV
        MADIT EA M EMERK+NFLMKVVEERDHEIT  REQMRT ET ESSQTP+VKATDKGKNVV
Subjt:  MADITVEATMTEMERKVNFLMKVVEERDHEITISREQMRTHETVESSQTPIVKATDKGKNVV

KAA0051467.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]3.43e-33100Show/hide
Query:  MADITVEATMTEMERKVNFLMKVVEERDHEITISREQMRTHETVESSQTPIVKATDKGKNVV
        MADITVEATMTEMERKVNFLMKVVEERDHEITISREQMRTHETVESSQTPIVKATDKGKNVV
Subjt:  MADITVEATMTEMERKVNFLMKVVEERDHEITISREQMRTHETVESSQTPIVKATDKGKNVV

TYK21903.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.13e-2583.87Show/hide
Query:  MADITVEATMTEMERKVNFLMKVVEERDHEITISREQMRTHETVESSQTPIVKATDKGKNVV
        MADIT +A M EMERK+NFLMKVVEERDHEIT  REQ+RT ET ESSQTPIVKATDKGKNVV
Subjt:  MADITVEATMTEMERKVNFLMKVVEERDHEITISREQMRTHETVESSQTPIVKATDKGKNVV

TYK22865.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]5.33e-2685.48Show/hide
Query:  MADITVEATMTEMERKVNFLMKVVEERDHEITISREQMRTHETVESSQTPIVKATDKGKNVV
        MADIT EA M EM+RK+NFLMKVVEERDHEIT  REQMRT ET ESSQTPIVKATDKGKNVV
Subjt:  MADITVEATMTEMERKVNFLMKVVEERDHEITISREQMRTHETVESSQTPIVKATDKGKNVV

TrEMBL top hitse value%identityAlignment
A0A5A7TYE9 Ty3-gypsy retrotransposon protein1.5e-1885.48Show/hide
Query:  MADITVEATMTEMERKVNFLMKVVEERDHEITISREQMRTHETVESSQTPIVKATDKGKNVV
        MADIT EA M EMERK+NFLMKVVEERDHEIT  REQMRT ET ESSQTP+VKATDKGKNVV
Subjt:  MADITVEATMTEMERKVNFLMKVVEERDHEITISREQMRTHETVESSQTPIVKATDKGKNVV

A0A5A7UAR4 Ty3-gypsy retrotransposon protein4.5e-23100Show/hide
Query:  MADITVEATMTEMERKVNFLMKVVEERDHEITISREQMRTHETVESSQTPIVKATDKGKNVV
        MADITVEATMTEMERKVNFLMKVVEERDHEITISREQMRTHETVESSQTPIVKATDKGKNVV
Subjt:  MADITVEATMTEMERKVNFLMKVVEERDHEITISREQMRTHETVESSQTPIVKATDKGKNVV

A0A5A7UG56 Ty3-gypsy retrotransposon protein2.0e-1883.87Show/hide
Query:  MADITVEATMTEMERKVNFLMKVVEERDHEITISREQMRTHETVESSQTPIVKATDKGKNVV
        MADIT EA M EMERK+NFLMK VEERDHEIT  REQMRT ET+ESSQTP+VKATDKGKNVV
Subjt:  MADITVEATMTEMERKVNFLMKVVEERDHEITISREQMRTHETVESSQTPIVKATDKGKNVV

A0A5A7UWX8 Ty3-gypsy retrotransposon protein1.2e-1885.48Show/hide
Query:  MADITVEATMTEMERKVNFLMKVVEERDHEITISREQMRTHETVESSQTPIVKATDKGKNVV
        MADITVEA + EMERKVNFLMKVVEERDHEIT  REQM+THET +SSQTP+VKATDKGKNVV
Subjt:  MADITVEATMTEMERKVNFLMKVVEERDHEITISREQMRTHETVESSQTPIVKATDKGKNVV

A0A5D3C8K3 Ty3-gypsy retrotransposon protein1.2e-1885.48Show/hide
Query:  MADITVEATMTEMERKVNFLMKVVEERDHEITISREQMRTHETVESSQTPIVKATDKGKNVV
        MADITVEA + EMERKVNFLMKVVEERDHEIT  REQM+THET +SSQTP+VKATDKGKNVV
Subjt:  MADITVEATMTEMERKVNFLMKVVEERDHEITISREQMRTHETVESSQTPIVKATDKGKNVV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGATATAACGGTCGAGGCTACCATGACAGAGATGGAGAGAAAAGTTAACTTCCTGATGAAGGTTGTGGAGGAACGAGACCATGAAATCACAATTTCGAGAGAGCA
GATGCGGACTCATGAAACTGTTGAGTCAAGTCAAACTCCTATTGTCAAAGCTACTGATAAAGGGAAGAATGTAGTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTGATATAACGGTCGAGGCTACCATGACAGAGATGGAGAGAAAAGTTAACTTCCTGATGAAGGTTGTGGAGGAACGAGACCATGAAATCACAATTTCGAGAGAGCA
GATGCGGACTCATGAAACTGTTGAGTCAAGTCAAACTCCTATTGTCAAAGCTACTGATAAAGGGAAGAATGTAGTGTAG
Protein sequenceShow/hide protein sequence
MADITVEATMTEMERKVNFLMKVVEERDHEITISREQMRTHETVESSQTPIVKATDKGKNVV