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IVF0018269 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0018269
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionC2H2-type domain-containing protein
Genome locationchr06:15170362..15170850
RNA-Seq ExpressionIVF0018269
SyntenyIVF0018269
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581122.1 Zinc finger protein KNUCKLES, partial [Cucurbita argyrosperma subsp. sororia]7.21e-3469.83Show/hide
Query:  MADPTIYDFLSQTTTAAPSNNSTTTATVLPKAASSRKS-HSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALTTSEILHLGCSSLQHSPP
        MADP IYDFL+QTTTA+ S          PKA+   +S +S SRIFPCLYCPRKFYTSQALGGHQNAHKRERAA SRKA A   SEILHLG  SL   PP
Subjt:  MADPTIYDFLSQTTTAAPSNNSTTTATVLPKAASSRKS-HSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALTTSEILHLGCSSLQHSPP

Query:  PPPPTITTTHHHHHLP
        PPPPT TTT  HHHLP
Subjt:  PPPPTITTTHHHHHLP

KAG7017856.1 Zinc finger protein KNUCKLES, partial [Cucurbita argyrosperma subsp. argyrosperma]1.01e-3268.97Show/hide
Query:  MADPTIYDFLSQTTTAAPSNNSTTTATVLPKAASSRKS-HSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALTTSEILHLGCSSLQHSPP
        MADP IYDFL+QTTTA+ S          PKA+   +S +S SRIFPCLYCPRKFYTSQALGGHQNAHKRERAA SRKA A   SEILHLG  SL   PP
Subjt:  MADPTIYDFLSQTTTAAPSNNSTTTATVLPKAASSRKS-HSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALTTSEILHLGCSSLQHSPP

Query:  PPPPTITTTHHHHHLP
        PPP T TTT  HHHLP
Subjt:  PPPPTITTTHHHHHLP

KAG7022634.1 Zinc finger protein KNUCKLES, partial [Cucurbita argyrosperma subsp. argyrosperma]3.37e-3371.68Show/hide
Query:  MADPTIYDFLSQTTTAAPSNNSTTTATVLPKAASSRKSHSQ---SRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALTTSEILHLGCSSLQHS
        MADP IYDFLSQTT    ++NS      +PK  S RKS SQ   SRIFPCLYCPRKFYTSQALGGHQNAHKRERAA SRKA    TSEILHLG  SLQHS
Subjt:  MADPTIYDFLSQTTTAAPSNNSTTTATVLPKAASSRKSHSQ---SRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALTTSEILHLGCSSLQHS

Query:  PPPPPPTITTTHH
         PPPPP  TT HH
Subjt:  PPPPPPTITTTHH

KGN58096.1 hypothetical protein Csa_017649 [Cucumis sativus]5.14e-7092.62Show/hide
Query:  MADPTIYDFLSQTTTAAPSNNSTTTATVLPKAASSRKSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALTTSEILHLGCSSLQHSPPP
        MADPTIYDFLSQTTTA PSNNSTT    LPKAASSRKSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALTT+EILHLGCSSLQHSPPP
Subjt:  MADPTIYDFLSQTTTAAPSNNSTTTATVLPKAASSRKSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALTTSEILHLGCSSLQHSPPP

Query:  PPPTITTTHHHHHLPPHFYPFP
        PPPT T THHHHHLPPHFYP P
Subjt:  PPPTITTTHHHHHLPPHFYPFP

XP_022934585.1 protein LATE FLOWERING-like [Cucurbita moschata]1.33e-3370.54Show/hide
Query:  MADPTIYDFLSQTTTAAPSNNSTTTATVLPKAASSRKS-HSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALTTSEILHLGCSSLQHSPP
        MADP IYDFL+QTTTA+ S          PKA+   +S +S SRIFPCLYCPRKFYTSQALGGHQNAHKRERAA SRKA A   SEILHLG  SL   PP
Subjt:  MADPTIYDFLSQTTTAAPSNNSTTTATVLPKAASSRKS-HSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALTTSEILHLGCSSLQHSPP

Query:  PPPPTITTTHHH
        PPPPT TTTHHH
Subjt:  PPPPTITTTHHH

TrEMBL top hitse value%identityAlignment
A0A0A0LDF1 C2H2-type domain-containing protein9.9e-5492.62Show/hide
Query:  MADPTIYDFLSQTTTAAPSNNSTTTATVLPKAASSRKSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALTTSEILHLGCSSLQHSPPP
        MADPTIYDFLSQTTTA PSNNSTT    LPKAASSRKSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALTT+EILHLGCSSLQHSPPP
Subjt:  MADPTIYDFLSQTTTAAPSNNSTTTATVLPKAASSRKSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALTTSEILHLGCSSLQHSPPP

Query:  PPPTITTTHHHHHLPPHFYPFP
        PPPT T THHHHHLPPHFYP P
Subjt:  PPPTITTTHHHHHLPPHFYPFP

A0A6J1EJQ6 protein LATE FLOWERING-like2.1e-2468.47Show/hide
Query:  MADPTIYDFLSQTTTAAPSNNSTTTATVLPKAASSRKSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALTTSEILHLGCSSLQHSPPP
        MADP IYDFLSQTT    ++NS    T    +  S+  +S SRIFPCLYCPRKFYTSQALGGHQNAHKRER AASRKA    TSEILHLG  SLQHS PP
Subjt:  MADPTIYDFLSQTTTAAPSNNSTTTATVLPKAASSRKSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALTTSEILHLGCSSLQHSPPP

Query:  PPPTITTTHHH
        PPP   TT+HH
Subjt:  PPPTITTTHHH

A0A6J1F843 protein LATE FLOWERING-like2.5e-2565.04Show/hide
Query:  MADPTIYDFLSQTTTAAPSNNSTTTATVLPKAASSRKS-HSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALTTSEILHLGCSSLQHSPP
        MADP IYDFL+QTTTA+ S          PKA+   +S +S SRIFPCLYCPRKFYTSQALGGHQNAHKRER AASRKA A   SEILHLG       PP
Subjt:  MADPTIYDFLSQTTTAAPSNNSTTTATVLPKAASSRKS-HSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALTTSEILHLGCSSLQHSPP

Query:  PPPPTITTTHHHHHLPPHFYPFP
        PPPPT TTTHHH   P    P P
Subjt:  PPPPTITTTHHHHHLPPHFYPFP

A0A6J1J5R2 protein LATE FLOWERING-like2.6e-2262.6Show/hide
Query:  MADPTIYDFLSQTTTAAPSNNSTTTATVLPKAASSRKS-HSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALTTSEILHLGCSSLQHSPP
        MADP IYDFL+QTTTA+ S          PKA+   +S +S SRIFPCLYCPRKFYTSQALGGHQNAHKRER AASRKA A   SEILHLG      S P
Subjt:  MADPTIYDFLSQTTTAAPSNNSTTTATVLPKAASSRKS-HSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALTTSEILHLGCSSLQHSPP

Query:  PPPPTITTTHHHHHLPPHFYPFP
        P P T T THHH   P    P P
Subjt:  PPPPTITTTHHHHHLPPHFYPFP

A0A6J1JQI7 protein LATE FLOWERING-like3.7e-2467.57Show/hide
Query:  MADPTIYDFLSQTTTAAPSNNSTTTATVLPKAASSRKSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALTTSEILHLGCSSLQHSPPP
        MADP IYDFLSQTT    ++NS    T    +  S+  +S SRIFPCLYCPRKFYTSQALGGHQNAHKRER AASRK   + TSEILHLG  SLQHS PP
Subjt:  MADPTIYDFLSQTTTAAPSNNSTTTATVLPKAASSRKSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALTTSEILHLGCSSLQHSPPP

Query:  PPPTITTTHHH
        PPP   TT+HH
Subjt:  PPPTITTTHHH

SwissProt top hitse value%identityAlignment
Q39263 Zinc finger protein 42.7e-0852.73Show/hide
Query:  STTTATVLPKAASSRKSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASR
        S+T+ +  P+    ++     R+F C YC RKFY+SQALGGHQNAHKRER  A R
Subjt:  STTTATVLPKAASSRKSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASR

Q39266 Zinc finger protein 72.1e-0840.45Show/hide
Query:  SRKSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASR------------KAAALTTSEI-LHLGCSSLQHSPPPPPPTITTTHH
        S K  +  R+F C YC RKFY+SQALGGHQNAHKRER  A R            +    T+S + +      L H+   P P ++  HH
Subjt:  SRKSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASR------------KAAALTTSEI-LHLGCSSLQHSPPPPPPTITTTHH

Q42485 Zinc finger protein 11.2e-0859.26Show/hide
Query:  KAASSRKSHSQ--------SRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASR
        K +SS  SH Q         R+F C YC RKFY+SQALGGHQNAHKRER  A R
Subjt:  KAASSRKSHSQ--------SRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASR

Q9FFX4 Zinc finger protein KNUCKLES1.0e-1043.33Show/hide
Query:  KAASSRKSHSQS--------RIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALTTSE---------ILHLGC--------SSLQHSPPPPPPTI
        K  SS K HS S        R+FPC YCPRKFYTSQALGGHQNAHKRERAAA R    L  S          +    C        S+  + P    PT+
Subjt:  KAASSRKSHSQS--------RIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALTTSE---------ILHLGC--------SSLQHSPPPPPPTI

Query:  TTT--HHHHHLPPHFYPFPL
         T   +   H  P+ YPF L
Subjt:  TTT--HHHHHLPPHFYPFPL

Q9FKA9 Protein LATE FLOWERING3.5e-0838.83Show/hide
Query:  KAASSRKSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAA---LTTSEILHLGCSSLQHSPPPPPPTITTTHHHHHLPPHFYPFPLQYLL
        +A  + ++ S  RIFPCL+C RKF++SQALGGHQNAHK+ER AA R   A   +  ++ LH              P   ++   HHL    YP       
Subjt:  KAASSRKSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAA---LTTSEILHLGCSSLQHSPPPPPPTITTTHHHHHLPPHFYPFPLQYLL

Query:  FST
        F T
Subjt:  FST

Arabidopsis top hitse value%identityAlignment
AT1G24625.1 zinc finger protein 71.5e-0940.45Show/hide
Query:  SRKSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASR------------KAAALTTSEI-LHLGCSSLQHSPPPPPPTITTTHH
        S K  +  R+F C YC RKFY+SQALGGHQNAHKRER  A R            +    T+S + +      L H+   P P ++  HH
Subjt:  SRKSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASR------------KAAALTTSEI-LHLGCSSLQHSPPPPPPTITTTHH

AT1G66140.1 zinc finger protein 41.9e-0952.73Show/hide
Query:  STTTATVLPKAASSRKSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASR
        S+T+ +  P+    ++     R+F C YC RKFY+SQALGGHQNAHKRER  A R
Subjt:  STTTATVLPKAASSRKSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASR

AT1G80730.1 zinc-finger protein 18.7e-1059.26Show/hide
Query:  KAASSRKSHSQ--------SRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASR
        K +SS  SH Q         R+F C YC RKFY+SQALGGHQNAHKRER  A R
Subjt:  KAASSRKSHSQ--------SRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASR

AT5G14010.1 C2H2 and C2HC zinc fingers superfamily protein7.1e-1243.33Show/hide
Query:  KAASSRKSHSQS--------RIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALTTSE---------ILHLGC--------SSLQHSPPPPPPTI
        K  SS K HS S        R+FPC YCPRKFYTSQALGGHQNAHKRERAAA R    L  S          +    C        S+  + P    PT+
Subjt:  KAASSRKSHSQS--------RIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALTTSE---------ILHLGC--------SSLQHSPPPPPPTI

Query:  TTT--HHHHHLPPHFYPFPL
         T   +   H  P+ YPF L
Subjt:  TTT--HHHHHLPPHFYPFPL

AT5G48890.1 C2H2-like zinc finger protein2.5e-0938.83Show/hide
Query:  KAASSRKSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAA---LTTSEILHLGCSSLQHSPPPPPPTITTTHHHHHLPPHFYPFPLQYLL
        +A  + ++ S  RIFPCL+C RKF++SQALGGHQNAHK+ER AA R   A   +  ++ LH              P   ++   HHL    YP       
Subjt:  KAASSRKSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAA---LTTSEILHLGCSSLQHSPPPPPPTITTTHHHHHLPPHFYPFPLQYLL

Query:  FST
        F T
Subjt:  FST


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGACCCAACCATTTACGACTTCCTTAGCCAAACAACAACAGCAGCTCCTTCAAATAATTCAACAACAACAGCAACAGTACTACCCAAAGCTGCTTCTTCAAGAAA
ATCACATTCTCAATCTCGCATTTTCCCATGTCTTTACTGCCCTCGCAAATTTTACACTTCTCAAGCCCTAGGCGGACACCAAAATGCACACAAGAGAGAAAGAGCCGCTG
CCTCTCGTAAGGCGGCCGCCCTCACTACCTCTGAAATTCTTCATCTCGGTTGTTCCTCCCTTCAACACTCTCCTCCCCCACCCCCACCAACCATCACTACTACTCACCAT
CATCATCATCTCCCACCCCACTTCTATCCCTTCCCACTCCAGTACCTTCTTTTCTCGACCACCACCATTCCTTTCATCACAATAATTTCTGTACTAACACCTCTGCCTCC
CCCGATGCTCTCTCTCCCACCAACACTGACCCCGCACTTGAACATCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGACCCAACCATTTACGACTTCCTTAGCCAAACAACAACAGCAGCTCCTTCAAATAATTCAACAACAACAGCAACAGTACTACCCAAAGCTGCTTCTTCAAGAAA
ATCACATTCTCAATCTCGCATTTTCCCATGTCTTTACTGCCCTCGCAAATTTTACACTTCTCAAGCCCTAGGCGGACACCAAAATGCACACAAGAGAGAAAGAGCCGCTG
CCTCTCGTAAGGCGGCCGCCCTCACTACCTCTGAAATTCTTCATCTCGGTTGTTCCTCCCTTCAACACTCTCCTCCCCCACCCCCACCAACCATCACTACTACTCACCAT
CATCATCATCTCCCACCCCACTTCTATCCCTTCCCACTCCAGTACCTTCTTTTCTCGACCACCACCATTCCTTTCATCACAATAATTTCTGTACTAACACCTCTGCCTCC
CCCGATGCTCTCTCTCCCACCAACACTGACCCCGCACTTGAACATCTAA
Protein sequenceShow/hide protein sequence
MADPTIYDFLSQTTTAAPSNNSTTTATVLPKAASSRKSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALTTSEILHLGCSSLQHSPPPPPPTITTTHH
HHHLPPHFYPFPLQYLLFSTTTIPFITIISVLTPLPPPMLSLPPTLTPHLNI