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IVF0018272 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0018272
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionauxin-responsive protein SAUR24-like
Genome locationchr11:2199956..2200534
RNA-Seq ExpressionIVF0018272
SyntenyIVF0018272
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008457632.1 PREDICTED: auxin-responsive protein SAUR24-like [Cucumis melo]2.33e-64100Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKNRLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA
        MGIRLLSLVPHAKQILKMQSGFTKNRLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKNRLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA

XP_011649273.1 auxin-responsive protein SAUR21 [Cucumis sativus]5.97e-5889.69Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKNRLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA
        MG+ LL LVPHAK+ILKMQS FTKN+L+VPKGHVAVYVGEIQRKRFVVP+SYLNDPSFQQLL+RAEEEFGFHHPHGGLTIPCKEDAFVDLTSRL+VA
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKNRLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA

XP_016902164.1 PREDICTED: auxin-responsive protein SAUR24-like [Cucumis melo]1.25e-5991.75Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKNRLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA
        MG+ LLSLVPHAK+ILKMQSGFTKN+L+VPKGHVAVYVGEIQRKRFVVP+SYLNDPSFQQLL+RAEEEFGFHHPHGGLTIPCKEDAFVDLTSRL+VA
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKNRLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA

XP_023512611.1 auxin-responsive protein SAUR24-like [Cucurbita pepo subsp. pepo]4.20e-5890.72Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKNRLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA
        MGIR LSLVPHAKQILKMQSGFTKN+L+VPKGHVAVYVGEIQRKRFVVPISYLN PSFQQLLN AEE+FGFHHP GGLTIPCKEDAF+DLTSRLQV+
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKNRLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA

XP_031736841.1 auxin-responsive protein SAUR24-like [Cucumis sativus]1.30e-6195.88Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKNRLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA
        MG RLLSLVPHAKQILKMQSGFTKN+LNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLL+ AEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKNRLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA

TrEMBL top hitse value%identityAlignment
A0A0A0LPI0 Uncharacterized protein1.2e-4695.88Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKNRLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA
        MG RLLSLVPHAKQILKMQSGFTKN+LNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLL+ AEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKNRLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA

A0A1S3C5I3 auxin-responsive protein SAUR24-like9.8e-49100Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKNRLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA
        MGIRLLSLVPHAKQILKMQSGFTKNRLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKNRLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA

A0A1S4E1Q9 auxin-responsive protein SAUR24-like3.8e-4591.75Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKNRLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA
        MG+ LLSLVPHAK+ILKMQSGFTKN+L+VPKGHVAVYVGEIQRKRFVVP+SYLNDPSFQQLL+RAEEEFGFHHPHGGLTIPCKEDAFVDLTSRL+VA
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKNRLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA

A0A5A7TRJ5 Auxin-responsive protein SAUR24-like9.8e-49100Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKNRLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA
        MGIRLLSLVPHAKQILKMQSGFTKNRLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKNRLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA

A0A5A7TU68 Auxin-responsive protein SAUR24-like3.8e-4591.75Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKNRLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA
        MG+ LLSLVPHAK+ILKMQSGFTKN+L+VPKGHVAVYVGEIQRKRFVVP+SYLNDPSFQQLL+RAEEEFGFHHPHGGLTIPCKEDAFVDLTSRL+VA
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKNRLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA

SwissProt top hitse value%identityAlignment
Q9FJF6 Auxin-responsive protein SAUR238.9e-2370.77Show/hide
Query:  PKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRL
        PKG +AVYVGE Q+KR++VP+SYLN PSFQ LL+++EEEFGF HP GGLTIPC ED F+++TSRL
Subjt:  PKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRL

Q9FJF7 Auxin-responsive protein SAUR225.2e-2369.7Show/hide
Query:  PKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQ
        PKG +AVYVGE Q+KR++VP+SYLN PSFQ LL+++E+EFGF HP GGLTIPC ED F+++TSRLQ
Subjt:  PKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQ

Q9FJF9 Auxin-responsive protein SAUR218.9e-2369.7Show/hide
Query:  PKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQ
        PKG +AVYVGE Q+KR++VP+SYL+ PSFQ LL+++EEEFGF HP GGLTIPC ED F+++TSRLQ
Subjt:  PKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQ

Q9FJG0 Auxin-responsive protein SAUR202.3e-2363.29Show/hide
Query:  KMQSGFTKNRLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQ
        K+ S  T      PKG +AVYVGE Q+KR++VPISYLN PSFQ LL+++EEEFGF HP GGLTIPC ED F+++TSR Q
Subjt:  KMQSGFTKNRLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQ

Q9FK62 Auxin-responsive protein SAUR244.7e-2461.9Show/hide
Query:  AKQILKMQSGFTKNRLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQ
        AK+IL   +G        PKG +AVYVGE Q+KR++VP+SYLN PSFQ LL+++EEEFGF HP GGLTIPC ED F+++TSRLQ
Subjt:  AKQILKMQSGFTKNRLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQ

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family1.4e-2656.12Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKNRLNVPKGHVAVYVGE-IQRKRFVVPISYLNDPSFQQLLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA
        M IR+  ++  +KQ+LK  S  + N + +PKGH+AVYVGE +Q++RFVVP++YL+ P FQ+LL +AEEEFGF HP GGLTIPC E  F+DL SRL  +
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKNRLNVPKGHVAVYVGE-IQRKRFVVPISYLNDPSFQQLLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA

AT4G34790.1 SAUR-like auxin-responsive protein family2.6e-2555.56Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKNRLN-----------VPKGHVAVYVGE-IQRKRFVVPISYLNDPSFQQLLNRAEEEFGFHHPHGGLTIPCKEDAFV
        MG+ + S++P+AKQI K QS   KN  +           VPKGHVAVYVGE +++KRFVVPISYLN P F++ LNRAEEE GFHH  GGLTIPC+E++F+
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKNRLN-----------VPKGHVAVYVGE-IQRKRFVVPISYLNDPSFQQLLNRAEEEFGFHHPHGGLTIPCKEDAFV

Query:  DLTSRLQV
         L +  Q+
Subjt:  DLTSRLQV

AT4G34810.1 SAUR-like auxin-responsive protein family4.7e-2758.1Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKNRL------NVPKGHVAVYVG---EIQRKRFVVPISYLNDPSFQQLLNRAEEEFGFHHPHGGLTIPCKEDAFVDL-
        MG+   ++    KQILK+ S   +NR       +VPKGHVAVYVG   E+++KRFVVPIS+LN PSF++ L+RAEEEFGF+HP GGLTIPC+E+ F+DL 
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKNRL------NVPKGHVAVYVG---EIQRKRFVVPISYLNDPSFQQLLNRAEEEFGFHHPHGGLTIPCKEDAFVDL-

Query:  TSRLQ
         SRLQ
Subjt:  TSRLQ

AT4G38840.1 SAUR-like auxin-responsive protein family8.0e-2757.73Show/hide
Query:  MGIRLLSLVPHAKQILK----MQSGFTKNRLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSR
        M IR+  ++  +KQIL+    + S  + + L+VPKG++AVYVGE   KRFVVP+SYL+ PSFQ LL +AEEEFGF HP GGLTIPC E+ F+DL SR
Subjt:  MGIRLLSLVPHAKQILK----MQSGFTKNRLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSR

AT5G18080.1 SAUR-like auxin-responsive protein family3.3e-2561.9Show/hide
Query:  AKQILKMQSGFTKNRLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQ
        AK+IL   +G        PKG +AVYVGE Q+KR++VP+SYLN PSFQ LL+++EEEFGF HP GGLTIPC ED F+++TSRLQ
Subjt:  AKQILKMQSGFTKNRLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGATTAGATTGCTATCTTTGGTTCCTCATGCCAAGCAAATCTTGAAGATGCAGTCAGGGTTTACCAAAAACCGACTGAATGTTCCAAAAGGCCATGTTGCCGTTTA
TGTGGGAGAGATTCAAAGGAAGCGGTTCGTGGTTCCAATATCTTACTTAAACGATCCATCGTTCCAGCAACTGCTCAACCGTGCAGAGGAAGAGTTTGGCTTTCATCATC
CCCATGGGGGTCTGACAATTCCTTGCAAAGAAGATGCCTTTGTTGATCTCACTTCTAGATTGCAAGTAGCTTGA
mRNA sequenceShow/hide mRNA sequence
TTAACTTCCTCTTCTACTTGGTTCTGTACCAATCTGATCAAAACTTAAAACATTTCTCAAATATTTCTCAACCTTTCATCTTAACACAAATGGGGATTAGATTGCTATCT
TTGGTTCCTCATGCCAAGCAAATCTTGAAGATGCAGTCAGGGTTTACCAAAAACCGACTGAATGTTCCAAAAGGCCATGTTGCCGTTTATGTGGGAGAGATTCAAAGGAA
GCGGTTCGTGGTTCCAATATCTTACTTAAACGATCCATCGTTCCAGCAACTGCTCAACCGTGCAGAGGAAGAGTTTGGCTTTCATCATCCCCATGGGGGTCTGACAATTC
CTTGCAAAGAAGATGCCTTTGTTGATCTCACTTCTAGATTGCAAGTAGCTTGAAGGATGAAGAGTAAAGAGCAATCTGTCATTTATGACAGTTTTTGTCTGTTCTTTTTC
TCAATTCACTTGCTTTTTGACTTGCAAGAGAGTGTATAAATTAGAGTGCCTTCTTACTTGTATATTGAGCATCATTGTAAAGGAGAATTACTTAAAGAAATTGTGACTAT
AAAAAAGGTTAATACAGAAACAATTCAGC
Protein sequenceShow/hide protein sequence
MGIRLLSLVPHAKQILKMQSGFTKNRLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA