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IVF0018304 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0018304
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon gag protein
Genome locationchr02:20628411..20628797
RNA-Seq ExpressionIVF0018304
SyntenyIVF0018304
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032798.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.30e-2653.12Show/hide
Query:  LVQYFYSGLTPLDRNYVDVAAEGAFSDKTPIEARTLIARMAKNTQTFGSRTESL-NSSSIEISELKNQM----SYLISMVTGNTHQLMICGVCGKIEHFN
        L+QYFYSGL   DRN VD AA GA +DKTPIEAR LI RMA+N+Q FG+R   L NS + E+SELK+QM    + L S V G   ++  CGVCG + + N
Subjt:  LVQYFYSGLTPLDRNYVDVAAEGAFSDKTPIEARTLIARMAKNTQTFGSRTESL-NSSSIEISELKNQM----SYLISMVTGNTHQLMICGVCGKIEHFN

Query:  DQCP-LVKDVNPGNGFRRYEPPSSNFYN
        D+CP +++DVN     RRY+P   N YN
Subjt:  DQCP-LVKDVNPGNGFRRYEPPSSNFYN

KAA0058150.1 uncharacterized protein E6C27_scaffold274G004630 [Cucumis melo var. makuwa]8.73e-2651.2Show/hide
Query:  LVQYFYSGLTPLDRNYVDVAAEGAFSDKTPIEARTLIARMAKNTQTFGSRTESL-NSSSIEISELKNQM----SYLISMVTGNTHQLMICGVCGKIEHFN
        L+QYFYSGL   DRN VD A  GA +DKTP EAR LI+RM +N+Q+FG+R   L NS + E+SELK+QM    + L S V G   ++  CGVCG + H N
Subjt:  LVQYFYSGLTPLDRNYVDVAAEGAFSDKTPIEARTLIARMAKNTQTFGSRTESL-NSSSIEISELKNQM----SYLISMVTGNTHQLMICGVCGKIEHFN

Query:  DQCP-LVKDVNPGNGFRRYEPPSSN
        D+CP +++DVN     RRY+P  +N
Subjt:  DQCP-LVKDVNPGNGFRRYEPPSSN

KAA0061138.1 retrotransposon gag protein [Cucumis melo var. makuwa]2.28e-2550.78Show/hide
Query:  LVQYFYSGLTPLDRNYVDVAAEGAFSDKTPIEARTLIARMAKNTQTFGSRTESL-NSSSIEISELKNQM----SYLISMVTGNTHQLMICGVCGKIEHFN
        L+QYF+SGL   DRN +DV A GA +DKTP EAR LI+RM +N+Q+FG+R   L NS + E+SELK+QM    + L S V G   ++  CGVCG + H N
Subjt:  LVQYFYSGLTPLDRNYVDVAAEGAFSDKTPIEARTLIARMAKNTQTFGSRTESL-NSSSIEISELKNQM----SYLISMVTGNTHQLMICGVCGKIEHFN

Query:  DQC-PLVKDVNPGNGFRRYEPPSSNFYN
        D+C  +++DVN     RRY+P  SN YN
Subjt:  DQC-PLVKDVNPGNGFRRYEPPSSNFYN

KAA0063974.1 retrotransposon gag protein [Cucumis melo var. makuwa]6.92e-2449.22Show/hide
Query:  LVQYFYSGLTPLDRNYVDVAAEGAFSDKTPIEARTLIARMAKNTQTFGSRTESL-NSSSIEISELKNQM----SYLISMVTGNTHQLMICGVCGKIEHFN
        L+QYFYS L    RN +D AA GA +DKTP +AR LI+RMAKN+Q+FG+R   L NS + E+SEL++QM    + L S V G    +  CGVCG + H N
Subjt:  LVQYFYSGLTPLDRNYVDVAAEGAFSDKTPIEARTLIARMAKNTQTFGSRTESL-NSSSIEISELKNQM----SYLISMVTGNTHQLMICGVCGKIEHFN

Query:  DQC-PLVKDVNPGNGFRRYEPPSSNFYN
        D+C  +++DVN     RRY+P   N YN
Subjt:  DQC-PLVKDVNPGNGFRRYEPPSSNFYN

XP_008460738.1 PREDICTED: uncharacterized protein LOC103499500 [Cucumis melo]2.91e-2650.39Show/hide
Query:  LVQYFYSGLTPLDRNYVDVAAEGAFSDKTPIEARTLIARMAKNTQTFGSRTESLNSS-SIEISELKNQMSYLISMVTGNTH---QLMICGVCGKIEHFND
        L+QYFYSGL   DR  VD AA GA  +KTP EAR LI+RMA+N+Q+FG+R   L+ S + E+SELK+QM  + +++T   H   ++  CGVCG + H ND
Subjt:  LVQYFYSGLTPLDRNYVDVAAEGAFSDKTPIEARTLIARMAKNTQTFGSRTESLNSS-SIEISELKNQMSYLISMVTGNTH---QLMICGVCGKIEHFND

Query:  QCP-LVKDVNPGNGFRRYEPPSSNFYN
        +CP L++DVN     RRY+P   N YN
Subjt:  QCP-LVKDVNPGNGFRRYEPPSSNFYN

TrEMBL top hitse value%identityAlignment
A0A1S3CD34 uncharacterized protein LOC1034995003.9e-2150.39Show/hide
Query:  LVQYFYSGLTPLDRNYVDVAAEGAFSDKTPIEARTLIARMAKNTQTFGSRTESLNSS-SIEISELKNQMSYLISMVTGNTH---QLMICGVCGKIEHFND
        L+QYFYSGL   DR  VD AA GA  +KTP EAR LI+RMA+N+Q+FG+R   L+ S + E+SELK+QM  + +++T   H   ++  CGVCG + H ND
Subjt:  LVQYFYSGLTPLDRNYVDVAAEGAFSDKTPIEARTLIARMAKNTQTFGSRTESLNSS-SIEISELKNQMSYLISMVTGNTH---QLMICGVCGKIEHFND

Query:  QCP-LVKDVNPGNGFRRYEPPSSNFYN
        +CP L++DVN     RRY+ P  N YN
Subjt:  QCP-LVKDVNPGNGFRRYEPPSSNFYN

A0A5A7SQH8 Retrotransposon gag protein2.1e-2253.12Show/hide
Query:  LVQYFYSGLTPLDRNYVDVAAEGAFSDKTPIEARTLIARMAKNTQTFGSRTESL-NSSSIEISELKNQM----SYLISMVTGNTHQLMICGVCGKIEHFN
        L+QYFYSGL   DRN VD AA GA +DKTPIEAR LI RMA+N+Q FG+R   L NS + E+SELK+QM    + L S V G   ++  CGVCG + + N
Subjt:  LVQYFYSGLTPLDRNYVDVAAEGAFSDKTPIEARTLIARMAKNTQTFGSRTESL-NSSSIEISELKNQM----SYLISMVTGNTHQLMICGVCGKIEHFN

Query:  DQCP-LVKDVNPGNGFRRYEPPSSNFYN
        D+CP +++DVN     RRY+ P  N YN
Subjt:  DQCP-LVKDVNPGNGFRRYEPPSSNFYN

A0A5A7ULC7 Retrotransposon gag protein7.4e-2049.22Show/hide
Query:  LVQYFYSGLTPLDRNYVDVAAEGAFSDKTPIEARTLIARMAKNTQTFGSR-TESLNSSSIEISELKNQM----SYLISMVTGNTHQLMICGVCGKIEHFN
        L+QYFYSGL   D+N VD AA GA +DKTPIEA+ LI+RMA+N+Q+FG+R +E +NS + E+SE+K+QM    + L S V G   ++  CGV G + H N
Subjt:  LVQYFYSGLTPLDRNYVDVAAEGAFSDKTPIEARTLIARMAKNTQTFGSR-TESLNSSSIEISELKNQM----SYLISMVTGNTHQLMICGVCGKIEHFN

Query:  DQCP-LVKDVNPGNGFRRYEPPSSNFYN
        D+CP +++DVN     ++Y+ P  N YN
Subjt:  DQCP-LVKDVNPGNGFRRYEPPSSNFYN

A0A5A7USL5 Retrotrans_gag domain-containing protein1.3e-2151.2Show/hide
Query:  LVQYFYSGLTPLDRNYVDVAAEGAFSDKTPIEARTLIARMAKNTQTFGSRTESL-NSSSIEISELKNQM----SYLISMVTGNTHQLMICGVCGKIEHFN
        L+QYFYSGL   DRN VD A  GA +DKTP EAR LI+RM +N+Q+FG+R   L NS + E+SELK+QM    + L S V G   ++  CGVCG + H N
Subjt:  LVQYFYSGLTPLDRNYVDVAAEGAFSDKTPIEARTLIARMAKNTQTFGSRTESL-NSSSIEISELKNQM----SYLISMVTGNTHQLMICGVCGKIEHFN

Query:  DQCP-LVKDVNPGNGFRRYEPPSSN
        D+CP +++DVN     RRY+P  +N
Subjt:  DQCP-LVKDVNPGNGFRRYEPPSSN

A0A5A7V0Q7 Retrotransposon gag protein6.7e-2150.39Show/hide
Query:  LVQYFYSGLTPLDRNYVDVAAEGAFSDKTPIEARTLIARMAKNTQTFGSRTESL-NSSSIEISELKNQM----SYLISMVTGNTHQLMICGVCGKIEHFN
        L+QYF+SGL   DRN +DV A GA +DKTP EAR LI+RM +N+Q+FG+R   L NS + E+SELK+QM    + L S V G   ++  CGVCG + H N
Subjt:  LVQYFYSGLTPLDRNYVDVAAEGAFSDKTPIEARTLIARMAKNTQTFGSRTESL-NSSSIEISELKNQM----SYLISMVTGNTHQLMICGVCGKIEHFN

Query:  DQCPLVKDVNPGNGFRRYEPPSSNFYN
        D+C  +K +   N  RRY+ P SN YN
Subjt:  DQCPLVKDVNPGNGFRRYEPPSSNFYN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTAAGCCTTTAGTACAATACTTCTATAGTGGTCTAACCCCCTTAGATAGAAATTATGTCGATGTGGCAGCGGAAGGTGCATTTAGTGATAAAACTCCCATTGAGGC
TAGAACATTAATTGCTAGAATGGCGAAAAATACTCAAACCTTTGGGAGTAGGACCGAGAGCTTAAATTCTTCCTCTATTGAGATAAGTGAGCTTAAAAATCAAATGAGCT
ACCTTATAAGCATGGTTACAGGAAATACCCATCAATTGATGATTTGTGGGGTATGTGGAAAAATCGAACACTTTAATGATCAATGCCCACTAGTAAAAGATGTCAACCCA
GGTAATGGGTTTAGGAGATATGAACCACCAAGTTCCAATTTTTACAATCCCTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGACTAAGCCTTTAGTACAATACTTCTATAGTGGTCTAACCCCCTTAGATAGAAATTATGTCGATGTGGCAGCGGAAGGTGCATTTAGTGATAAAACTCCCATTGAGGC
TAGAACATTAATTGCTAGAATGGCGAAAAATACTCAAACCTTTGGGAGTAGGACCGAGAGCTTAAATTCTTCCTCTATTGAGATAAGTGAGCTTAAAAATCAAATGAGCT
ACCTTATAAGCATGGTTACAGGAAATACCCATCAATTGATGATTTGTGGGGTATGTGGAAAAATCGAACACTTTAATGATCAATGCCCACTAGTAAAAGATGTCAACCCA
GGTAATGGGTTTAGGAGATATGAACCACCAAGTTCCAATTTTTACAATCCCTCATAA
Protein sequenceShow/hide protein sequence
MTKPLVQYFYSGLTPLDRNYVDVAAEGAFSDKTPIEARTLIARMAKNTQTFGSRTESLNSSSIEISELKNQMSYLISMVTGNTHQLMICGVCGKIEHFNDQCPLVKDVNP
GNGFRRYEPPSSNFYNPS