; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0018313 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0018313
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptiontRNA pseudouridine synthase
Genome locationchr11:27776461..27777961
RNA-Seq ExpressionIVF0018313
SyntenyIVF0018313
Gene Ontology termsGO:0001522 - pseudouridine synthesis (biological process)
GO:0008033 - tRNA processing (biological process)
GO:0034196 - acylglycerol transport (biological process)
GO:1990052 - ER to chloroplast lipid transport (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0070300 - phosphatidic acid binding (molecular function)
GO:0106029 - tRNA pseudouridine synthase activity (molecular function)
InterPro domainsIPR001406 - Pseudouridine synthase I, TruA
IPR020094 - Pseudouridine synthase TruA/RsuA/RluB/E/F, N-terminal
IPR020095 - Pseudouridine synthase I, TruA, C-terminal
IPR020097 - Pseudouridine synthase I, TruA, alpha/beta domain
IPR020103 - Pseudouridine synthase, catalytic domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004138518.2 uncharacterized protein LOC101205797 [Cucumis sativus]1.13e-15296.83Show/hide
Query:  QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTIMDPFQRCYTYHCVYKLNYAAMKEAANYFVGKHDFSAFTN
        QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPA PDFHARFSTLSKVYHYKIY+GTIMDPFQRCYTYHCVYKLNYAAMKEAANYFVGKHDFSAFTN
Subjt:  QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTIMDPFQRCYTYHCVYKLNYAAMKEAANYFVGKHDFSAFTN

Query:  AAHNNRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRKELAKYASGVPPQGLCLVSINYKEDHLKLPS
        AAHN+RVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDR+ELAKYASGVPPQGLCLVSINYKEDHLKLPS
Subjt:  AAHNNRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRKELAKYASGVPPQGLCLVSINYKEDHLKLPS

Query:  DCPGTSLGRSRSVGKCKVPFY
        DCPGTS GR+RSV KCKVPFY
Subjt:  DCPGTSLGRSRSVGKCKVPFY

XP_008458279.1 PREDICTED: tRNA pseudouridine synthase A 1 isoform X1 [Cucumis melo]1.47e-157100Show/hide
Query:  QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTIMDPFQRCYTYHCVYKLNYAAMKEAANYFVGKHDFSAFTN
        QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTIMDPFQRCYTYHCVYKLNYAAMKEAANYFVGKHDFSAFTN
Subjt:  QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTIMDPFQRCYTYHCVYKLNYAAMKEAANYFVGKHDFSAFTN

Query:  AAHNNRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRKELAKYASGVPPQGLCLVSINYKEDHLKLPS
        AAHNNRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRKELAKYASGVPPQGLCLVSINYKEDHLKLPS
Subjt:  AAHNNRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRKELAKYASGVPPQGLCLVSINYKEDHLKLPS

Query:  DCPGTSLGRSRSVGKCKVPFY
        DCPGTSLGRSRSVGKCKVPFY
Subjt:  DCPGTSLGRSRSVGKCKVPFY

XP_008458280.1 PREDICTED: tRNA pseudouridine synthase A 1 isoform X2 [Cucumis melo]5.03e-158100Show/hide
Query:  QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTIMDPFQRCYTYHCVYKLNYAAMKEAANYFVGKHDFSAFTN
        QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTIMDPFQRCYTYHCVYKLNYAAMKEAANYFVGKHDFSAFTN
Subjt:  QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTIMDPFQRCYTYHCVYKLNYAAMKEAANYFVGKHDFSAFTN

Query:  AAHNNRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRKELAKYASGVPPQGLCLVSINYKEDHLKLPS
        AAHNNRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRKELAKYASGVPPQGLCLVSINYKEDHLKLPS
Subjt:  AAHNNRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRKELAKYASGVPPQGLCLVSINYKEDHLKLPS

Query:  DCPGTSLGRSRSVGKCKVPFY
        DCPGTSLGRSRSVGKCKVPFY
Subjt:  DCPGTSLGRSRSVGKCKVPFY

XP_022959478.1 uncharacterized protein LOC111460439 isoform X2 [Cucurbita moschata]1.99e-14187.33Show/hide
Query:  QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTIMDPFQRCYTYHCVYKLNYAAMKEAANYFVGKHDFSAFTN
        QVAHF+TPFNYDSL+ +HAALNGLLP DIRVREMSPA PDFHARFSTLSKVYHYKIYN  I+DPFQRCYTYHCVYKLNYAAMKEAANYFVGKHDFSAF N
Subjt:  QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTIMDPFQRCYTYHCVYKLNYAAMKEAANYFVGKHDFSAFTN

Query:  AAHNNRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRKELAKYASGVPPQGLCLVSINYKEDHLKLPS
         AHN+RVVNPVKVIFRFDVIEMGAL+QLEVEGSGFLYRQVRNMV LL+QIGKEA+PP++VPKILA+RDRKELAKY + +PPQGLCLV INYKEDHLKLPS
Subjt:  AAHNNRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRKELAKYASGVPPQGLCLVSINYKEDHLKLPS

Query:  DCPGTSLGRSRSVGKCKVPFY
        DCPGTS GRS SV KCK+PFY
Subjt:  DCPGTSLGRSRSVGKCKVPFY

XP_038875516.1 tRNA pseudouridine synthase A 1 isoform X1 [Benincasa hispida]1.71e-14993.21Show/hide
Query:  QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTIMDPFQRCYTYHCVYKLNYAAMKEAANYFVGKHDFSAFTN
        QVAHF+TPFNYDSLESVHAALNGLLPVDIRVRE+SPAAPDFHARFSTLSKVYHYKIYNG I+DPFQRCYTYHCVYKLNYAAMKEAANYFVGKHDFSAFTN
Subjt:  QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTIMDPFQRCYTYHCVYKLNYAAMKEAANYFVGKHDFSAFTN

Query:  AAHNNRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRKELAKYASGVPPQGLCLVSINYKEDHLKLPS
        AAHN+RVVNPVKVIFRFDVI+MG LVQLEVEGSGFLYRQVRNMVGLLVQIGKEA+PP+VVPKILAS+DR+ELAKYASGVPPQGLCLVSINYKEDHLKLPS
Subjt:  AAHNNRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRKELAKYASGVPPQGLCLVSINYKEDHLKLPS

Query:  DCPGTSLGRSRSVGKCKVPFY
        DCPGTS+GR+RSV KCK+PFY
Subjt:  DCPGTSLGRSRSVGKCKVPFY

TrEMBL top hitse value%identityAlignment
A0A0A0KB67 tRNA pseudouridine synthase2.7e-11495.33Show/hide
Query:  QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTIMDPFQRCYTYHCVYKLNYAAMKEAANYFVGKHDFSAFTN
        QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPA PDFHARFSTLSKVYHYKIY+GTIMDPFQRCYTYHCVYKLNYAAMKEAANYFVGKHDFSAFTN
Subjt:  QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTIMDPFQRCYTYHCVYKLNYAAMKEAANYFVGKHDFSAFTN

Query:  AAHNNRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRKELAKYASGVPPQGLCLVSINYKEDHLKLPS
        AAHN+RVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDR+ELAKYASGVPPQGLCLVSINYKEDHLKLPS
Subjt:  AAHNNRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRKELAKYASGVPPQGLCLVSINYKEDHLKLPS

Query:  DCPGTSLGRSRSVG
        DCPGTS G   ++G
Subjt:  DCPGTSLGRSRSVG

A0A1S3C7H4 tRNA pseudouridine synthase9.8e-125100Show/hide
Query:  QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTIMDPFQRCYTYHCVYKLNYAAMKEAANYFVGKHDFSAFTN
        QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTIMDPFQRCYTYHCVYKLNYAAMKEAANYFVGKHDFSAFTN
Subjt:  QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTIMDPFQRCYTYHCVYKLNYAAMKEAANYFVGKHDFSAFTN

Query:  AAHNNRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRKELAKYASGVPPQGLCLVSINYKEDHLKLPS
        AAHNNRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRKELAKYASGVPPQGLCLVSINYKEDHLKLPS
Subjt:  AAHNNRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRKELAKYASGVPPQGLCLVSINYKEDHLKLPS

Query:  DCPGTSLGRSRSVGKCKVPFY
        DCPGTSLGRSRSVGKCKVPFY
Subjt:  DCPGTSLGRSRSVGKCKVPFY

A0A1S3C7L6 tRNA pseudouridine synthase9.8e-125100Show/hide
Query:  QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTIMDPFQRCYTYHCVYKLNYAAMKEAANYFVGKHDFSAFTN
        QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTIMDPFQRCYTYHCVYKLNYAAMKEAANYFVGKHDFSAFTN
Subjt:  QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTIMDPFQRCYTYHCVYKLNYAAMKEAANYFVGKHDFSAFTN

Query:  AAHNNRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRKELAKYASGVPPQGLCLVSINYKEDHLKLPS
        AAHNNRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRKELAKYASGVPPQGLCLVSINYKEDHLKLPS
Subjt:  AAHNNRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRKELAKYASGVPPQGLCLVSINYKEDHLKLPS

Query:  DCPGTSLGRSRSVGKCKVPFY
        DCPGTSLGRSRSVGKCKVPFY
Subjt:  DCPGTSLGRSRSVGKCKVPFY

A0A5D3BY40 Protein TRIGALACTOSYLDIACYLGLYCEROL 43.7e-116100Show/hide
Query:  QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTIMDPFQRCYTYHCVYKLNYAAMKEAANYFVGKHDFSAFTN
        QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTIMDPFQRCYTYHCVYKLNYAAMKEAANYFVGKHDFSAFTN
Subjt:  QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTIMDPFQRCYTYHCVYKLNYAAMKEAANYFVGKHDFSAFTN

Query:  AAHNNRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRKELAKYASGVPPQGLCLVSINYKEDHLKLPS
        AAHNNRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRKELAKYASGVPPQGLCLVSINYKEDHLKLPS
Subjt:  AAHNNRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRKELAKYASGVPPQGLCLVSINYKEDHLKLPS

Query:  DCPGTSLG
        DCPGTSLG
Subjt:  DCPGTSLG

A0A6J1H621 tRNA pseudouridine synthase1.9e-11287.33Show/hide
Query:  QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTIMDPFQRCYTYHCVYKLNYAAMKEAANYFVGKHDFSAFTN
        QVAHF+TPFNYDSL+ +HAALNGLLP DIRVREMSPA PDFHARFSTLSKVYHYKIYN  I+DPFQRCYTYHCVYKLNYAAMKEAANYFVGKHDFSAF N
Subjt:  QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTIMDPFQRCYTYHCVYKLNYAAMKEAANYFVGKHDFSAFTN

Query:  AAHNNRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRKELAKYASGVPPQGLCLVSINYKEDHLKLPS
         AHN+RVVNPVKVIFRFDVIEMGAL+QLEVEGSGFLYRQVRNMV LL+QIGKEA+PP++VPKILA+RDRKELAKY + +PPQGLCLV INYKEDHLKLPS
Subjt:  AAHNNRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRKELAKYASGVPPQGLCLVSINYKEDHLKLPS

Query:  DCPGTSLGRSRSVGKCKVPFY
        DCPGTS GRS SV KCK+PFY
Subjt:  DCPGTSLGRSRSVGKCKVPFY

SwissProt top hitse value%identityAlignment
A4J151 tRNA pseudouridine synthase A1.4e-3041.24Show/hide
Query:  ESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTIMDPFQRCYTYHCVYKLNYAAMKEAANYFVGKHDFSAFTNAAHNNRVVNPVKVI
        E    ALN LLP DI+V +      DFHARFS ++K Y Y IY+  +M PF R Y YH   +L+  AM+E A Y +G +DF +F   A    V + ++ I
Subjt:  ESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTIMDPFQRCYTYHCVYKLNYAAMKEAANYFVGKHDFSAFTNAAHNNRVVNPVKVI

Query:  FRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRKELAKYASGVPPQGLCLVSINY
        +R D+IE   ++ L + G+GFLY  VR + G L+ IG   + PE + KI+ S++R      A   PPQGLCL+ + Y
Subjt:  FRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRKELAKYASGVPPQGLCLVSINY

B1I1B5 tRNA pseudouridine synthase A2.2e-3341.97Show/hide
Query:  RFQVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTIMDPFQRCYTYHCVYKLNYAAMKEAANYFVGKHDFSAF
        R QV +FVT       E + AALNG+LP DI   +      DFHAR+S ++K Y Y +YN  +  PFQR Y+ H    L+  AM+ AA + +G+HDFS F
Subjt:  RFQVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTIMDPFQRCYTYHCVYKLNYAAMKEAANYFVGKHDFSAF

Query:  TNAAHNNRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRKELAKYASGVPPQGLCLVSINY
           A    V + V+ + R D+     LV+L     GFLY  VR M G L+++G E L PE +P I+AS DR   A+    VPP GLCL  + Y
Subjt:  TNAAHNNRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRKELAKYASGVPPQGLCLVSINY

Q3A3B5 tRNA pseudouridine synthase A5.7e-2938.35Show/hide
Query:  RFQVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTIMDPFQRCYTYHCVYKLNYAAMKEAANYFVGKHDFSAF
        R  VAHFVTP     + +    +N  LP  I VR+ +    DFHAR+S + K Y Y IY   +  P    +++H    L+  AM++AA   VG+HDF+AF
Subjt:  RFQVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTIMDPFQRCYTYHCVYKLNYAAMKEAANYFVGKHDFSAF

Query:  TNAAHNNRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRKELAKYASGV--PPQGLCLVSINYKEDHL
          +    R    V+ +F  D+++    V ++V GSGFL   VR MVG LV++G+ A PPE V  +LA   RK+     SG+  P QGLCL+ + Y     
Subjt:  TNAAHNNRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRKELAKYASGV--PPQGLCLVSINYKEDHL

Query:  KLPSDC
          P DC
Subjt:  KLPSDC

Q6MEE7 tRNA pseudouridine synthase A 12.5e-3739.29Show/hide
Query:  QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTIMDPFQRCYTYHCVYKLNYAAMKEAANYFVGKHDFSAFTN
        QVAHF    +Y  L  +H +LNGLLP DIR++ + P +P FH+++S + K YHY ++   +MDPFQR Y++H   K++   +K+AA  F G HDF++F N
Subjt:  QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTIMDPFQRCYTYHCVYKLNYAAMKEAANYFVGKHDFSAFTN

Query:  AAHNNRVV-NPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRKELAKYASGVPPQGLCLVSINYKEDH
         AH      NPV+ ++R D+      ++LE EG GFLY+ VRN+VG L+ +       E + +I A+++R++ +  A   PP+GL L+ + Y+ ++
Subjt:  AAHNNRVV-NPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRKELAKYASGVPPQGLCLVSINYKEDH

Q8R7Y7 tRNA pseudouridine synthase A1.4e-3043.75Show/hide
Query:  FQVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTIMDPFQRCYTYHCVYKLNYAAMKEAANYFVGKHDFSAFT
        +QVA+F T       E +  ALN +LP D+ V +       FHAR+S  SK Y Y I N     P  R Y +H  Y L+  AMK+AA +F G HDFSAF 
Subjt:  FQVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTIMDPFQRCYTYHCVYKLNYAAMKEAANYFVGKHDFSAFT

Query:  NAAHNNRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRKELAKYASGVPPQGLCLVSINY
          A  N+ VNPVK IF   V + G L+++EVE  GFLY  VR +VG LV +G   +    +P I+ S+DR    K     PPQGL LV I Y
Subjt:  NAAHNNRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRKELAKYASGVPPQGLCLVSINY

Arabidopsis top hitse value%identityAlignment
AT1G34150.1 Pseudouridine synthase family protein2.5e-1132.74Show/hide
Query:  LNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTIMDPFQRCYTYHCVYKLNYAAMKEAANYFVGKHDFSAFTNAAHNNRVVNPVKVIFRFDVI
        LN  LP DIRV   SPA  DFHARFS  ++ Y Y  +                   LN +AM  A   F+G+HDF  F      N      +V F F+V 
Subjt:  LNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTIMDPFQRCYTYHCVYKLNYAAMKEAANYFVGKHDFSAFTNAAHNNRVVNPVKVIFRFDVI

Query:  ------EMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRKELAKY--ASGVP
              E   L    + GS FL+ Q+R MV +L  IG+     +V+  +L ++      +Y  AS +P
Subjt:  ------EMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRKELAKY--ASGVP

AT3G06950.1 Pseudouridine synthase family protein2.5e-8870.27Show/hide
Query:  QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTIMDPFQRCYTYHCVYKLNYAAMKEAANYFVGKHDFSAFTN
        QVAHFVTPFNY SL+S HAALNGLLP DIRVRE+S A P+FHARFS  SKVY Y+IYN T MDPFQR + YHC YKLN + M+EAAN FVGKHDFSAF N
Subjt:  QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTIMDPFQRCYTYHCVYKLNYAAMKEAANYFVGKHDFSAFTN

Query:  AAHNNRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRKELAKYAS-GVPPQGLCLVSINYKEDHLKLP
        A   + V +P+K I RFDVI+MG+L+QLEVEGSGFLYRQVRNMV LL+QIGKEAL  ++VP IL ++DR+ LAKY S    P GLCLVS+ YKEDHLKLP
Subjt:  AAHNNRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRKELAKYAS-GVPPQGLCLVSINYKEDHLKLP

Query:  SDCPGTSLGRSRSVGKCKVPFY
         DCP TS GR  ++ KCK+PFY
Subjt:  SDCPGTSLGRSRSVGKCKVPFY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTGGGGTCAGGTCTGATGTGATTTTATGGAGTTGGGTTAAAACACATCATTGGAATACAATGCTTGCTGTTGCTTACGACAAGTTGAGGTTTCAGGTGGCTCACTT
TGTTACACCATTTAACTACGATAGCTTGGAAAGCGTTCATGCTGCACTGAATGGCCTTCTTCCTGTGGATATAAGAGTTCGAGAGATGAGTCCTGCTGCACCTGATTTTC
ATGCTCGGTTTTCTACCTTAAGCAAGGTTTATCACTACAAGATATATAATGGCACAATCATGGATCCATTTCAGCGTTGCTACACTTACCACTGTGTTTATAAACTCAAC
TATGCAGCCATGAAAGAAGCTGCAAATTATTTCGTTGGAAAGCATGATTTTTCTGCTTTTACAAATGCAGCTCATAACAATCGAGTGGTAAATCCAGTGAAGGTCATTTT
CCGTTTTGATGTGATAGAAATGGGAGCTCTTGTGCAGCTAGAAGTTGAGGGTTCTGGGTTCTTATATAGACAAGTTCGGAATATGGTTGGCTTGTTGGTTCAAATTGGAA
AGGAAGCACTTCCTCCTGAGGTTGTTCCTAAGATTTTGGCATCTCGAGATCGCAAAGAGCTTGCCAAGTATGCTTCGGGCGTTCCTCCTCAGGGACTGTGTCTTGTGAGT
ATAAATTATAAAGAGGACCATTTAAAGCTTCCATCTGATTGCCCTGGGACTAGTCTTGGTAGGAGTCGTAGTGTGGGCAAATGTAAAGTCCCTTTTTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTGGGGTCAGGTCTGATGTGATTTTATGGAGTTGGGTTAAAACACATCATTGGAATACAATGCTTGCTGTTGCTTACGACAAGTTGAGGTTTCAGGTGGCTCACTT
TGTTACACCATTTAACTACGATAGCTTGGAAAGCGTTCATGCTGCACTGAATGGCCTTCTTCCTGTGGATATAAGAGTTCGAGAGATGAGTCCTGCTGCACCTGATTTTC
ATGCTCGGTTTTCTACCTTAAGCAAGGTTTATCACTACAAGATATATAATGGCACAATCATGGATCCATTTCAGCGTTGCTACACTTACCACTGTGTTTATAAACTCAAC
TATGCAGCCATGAAAGAAGCTGCAAATTATTTCGTTGGAAAGCATGATTTTTCTGCTTTTACAAATGCAGCTCATAACAATCGAGTGGTAAATCCAGTGAAGGTCATTTT
CCGTTTTGATGTGATAGAAATGGGAGCTCTTGTGCAGCTAGAAGTTGAGGGTTCTGGGTTCTTATATAGACAAGTTCGGAATATGGTTGGCTTGTTGGTTCAAATTGGAA
AGGAAGCACTTCCTCCTGAGGTTGTTCCTAAGATTTTGGCATCTCGAGATCGCAAAGAGCTTGCCAAGTATGCTTCGGGCGTTCCTCCTCAGGGACTGTGTCTTGTGAGT
ATAAATTATAAAGAGGACCATTTAAAGCTTCCATCTGATTGCCCTGGGACTAGTCTTGGTAGGAGTCGTAGTGTGGGCAAATGTAAAGTCCCTTTTTATTGA
Protein sequenceShow/hide protein sequence
MPGVRSDVILWSWVKTHHWNTMLAVAYDKLRFQVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTIMDPFQRCYTYHCVYKLN
YAAMKEAANYFVGKHDFSAFTNAAHNNRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRKELAKYASGVPPQGLCLVS
INYKEDHLKLPSDCPGTSLGRSRSVGKCKVPFY