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IVF0018357 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0018357
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionDNA-binding protein S1FA-like
Genome locationchr08:28081694..28083491
RNA-Seq ExpressionIVF0018357
SyntenyIVF0018357
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR006779 - DNA binding protein S1FA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143239.1 DNA-binding protein S1FA [Cucumis sativus]1.27e-5398.88Show/hide
Query:  MEDDFDFGDKVPPAVNRMRNVIRDGEARGFNPGLIVLLVVGGLLFAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGVSAPGE
        MEDDFDFGDKVPPAVNRM NVIRDGEARGFNPGLIVLLVVGGLLFAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGVSAPGE
Subjt:  MEDDFDFGDKVPPAVNRMRNVIRDGEARGFNPGLIVLLVVGGLLFAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGVSAPGE
XP_008449267.1 PREDICTED: DNA-binding protein S1FA-like [Cucumis melo]1.08e-54100Show/hide
Query:  MEDDFDFGDKVPPAVNRMRNVIRDGEARGFNPGLIVLLVVGGLLFAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGVSAPGE
        MEDDFDFGDKVPPAVNRMRNVIRDGEARGFNPGLIVLLVVGGLLFAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGVSAPGE
Subjt:  MEDDFDFGDKVPPAVNRMRNVIRDGEARGFNPGLIVLLVVGGLLFAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGVSAPGE
XP_022962636.1 DNA-binding protein S1FA-like [Cucurbita moschata]6.80e-4989.89Show/hide
Query:  MEDDFDFGDKVPPAVNRMRNVIRDGEARGFNPGLIVLLVVGGLLFAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGVSAPGE
        MEDDFDFGDKVPPAVNRM NVIR+ +ARGFNPGLIVLLVVGGLL AFL GNYALY+YAQKTLPPK+KKPVSKKKMKRERLKQG+SAPGE
Subjt:  MEDDFDFGDKVPPAVNRMRNVIRDGEARGFNPGLIVLLVVGGLLFAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGVSAPGE
XP_022972581.1 DNA-binding protein S1FA-like [Cucurbita maxima]1.60e-4788.76Show/hide
Query:  MEDDFDFGDKVPPAVNRMRNVIRDGEARGFNPGLIVLLVVGGLLFAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGVSAPGE
        MEDDFDFGDKVPPAVNRM NVIRD +ARGFNPGLIVLLVVGGLL AFL GNYALY+YAQ TLP K+KKPVSKKKMKRERLKQG+SAPGE
Subjt:  MEDDFDFGDKVPPAVNRMRNVIRDGEARGFNPGLIVLLVVGGLLFAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGVSAPGE
XP_038881351.1 DNA-binding protein S1FA-like [Benincasa hispida]1.43e-5093.26Show/hide
Query:  MEDDFDFGDKVPPAVNRMRNVIRDGEARGFNPGLIVLLVVGGLLFAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGVSAPGE
        MEDDFDFGDKVPPAVNRM NVIRD +ARGFNPGLIVLLVVGGLL AFL GNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQG+SAPGE
Subjt:  MEDDFDFGDKVPPAVNRMRNVIRDGEARGFNPGLIVLLVVGGLLFAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGVSAPGE
TrEMBL top hitse value%identityAlignment
A0A0A0KEM3 DNA-binding protein S1FA5.8e-4098.88Show/hide
Query:  MEDDFDFGDKVPPAVNRMRNVIRDGEARGFNPGLIVLLVVGGLLFAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGVSAPGE
        MEDDFDFGDKVPPAVNRM NVIRDGEARGFNPGLIVLLVVGGLLFAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGVSAPGE
Subjt:  MEDDFDFGDKVPPAVNRMRNVIRDGEARGFNPGLIVLLVVGGLLFAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGVSAPGE
A0A1S3BLN5 DNA-binding protein S1FA-like9.0e-41100Show/hide
Query:  MEDDFDFGDKVPPAVNRMRNVIRDGEARGFNPGLIVLLVVGGLLFAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGVSAPGE
        MEDDFDFGDKVPPAVNRMRNVIRDGEARGFNPGLIVLLVVGGLLFAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGVSAPGE
Subjt:  MEDDFDFGDKVPPAVNRMRNVIRDGEARGFNPGLIVLLVVGGLLFAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGVSAPGE
A0A5A7TZ88 DNA-binding protein S1FA-like9.0e-41100Show/hide
Query:  MEDDFDFGDKVPPAVNRMRNVIRDGEARGFNPGLIVLLVVGGLLFAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGVSAPGE
        MEDDFDFGDKVPPAVNRMRNVIRDGEARGFNPGLIVLLVVGGLLFAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGVSAPGE
Subjt:  MEDDFDFGDKVPPAVNRMRNVIRDGEARGFNPGLIVLLVVGGLLFAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGVSAPGE
A0A6J1HDT2 DNA-binding protein S1FA-like2.3e-3689.89Show/hide
Query:  MEDDFDFGDKVPPAVNRMRNVIRDGEARGFNPGLIVLLVVGGLLFAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGVSAPGE
        MEDDFDFGDKVPPAVNRM NVIR+ +ARGFNPGLIVLLVVGGLL AFL GNYALY+YAQKTLPPK+KKPVSKKKMKRERLKQG+SAPGE
Subjt:  MEDDFDFGDKVPPAVNRMRNVIRDGEARGFNPGLIVLLVVGGLLFAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGVSAPGE
A0A6J1I6D0 DNA-binding protein S1FA-like2.5e-3588.76Show/hide
Query:  MEDDFDFGDKVPPAVNRMRNVIRDGEARGFNPGLIVLLVVGGLLFAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGVSAPGE
        MEDDFDFGDKVPPAVNRM NVIRD +ARGFNPGLIVLLVVGGLL AFL GNYALY+YAQ TLP K+KKPVSKKKMKRERLKQG+SAPGE
Subjt:  MEDDFDFGDKVPPAVNRMRNVIRDGEARGFNPGLIVLLVVGGLLFAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGVSAPGE
SwissProt top hitse value%identityAlignment
P42552 DNA-binding protein S1FA4.0e-2276.47Show/hide
Query:  IRDGEARGFNPGLIVLLVVGGLLFAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGVSAPGE
        + + EA+G NPGLIVLLV+GGLL  FLVGN+ LY YAQK LPPKKKKP+SKKKMKRERLKQGV+ PGE
Subjt:  IRDGEARGFNPGLIVLLVVGGLLFAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGVSAPGE
P42553 DNA-binding protein S1FA13.4e-2171.62Show/hide
Query:  NRMRNVIRDGEARGFNPGLIVLLVVGGLLFAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGVSAPGE
        ++  N+I +   +G NPG IVLLVV  LL  F VGNYALYMYAQKTLPP+KKKPVSKKK+KRE+LKQGVSAPGE
Subjt:  NRMRNVIRDGEARGFNPGLIVLLVVGGLLFAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGVSAPGE
Q42337 DNA-binding protein S1FA21.3e-2075Show/hide
Query:  EARGFNPGLIVLLVVGGLLFAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGVSAPGE
        EA+G NPGLIVLLV+GGLL  FL+ NY +YMYAQK LPP+KKKP+SKKK+KRE+LKQGV  PGE
Subjt:  EARGFNPGLIVLLVVGGLLFAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGVSAPGE
Q7XLX6 DNA-binding protein S1FA21.0e-2072.86Show/hide
Query:  NVIRDGEARGFNPGLIVLLVVGGLLFAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGVSAPGE
        NV+ +   +G NPG+IVL+VV   L  F VGNYALY+YAQKTLPP+KKKPVSKKKMKRE+LKQGVSAPGE
Subjt:  NVIRDGEARGFNPGLIVLLVVGGLLFAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGVSAPGE
Q93VI0 DNA-binding protein S1FA32.2e-2075Show/hide
Query:  EARGFNPGLIVLLVVGGLLFAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGVSAPGE
        E++G NPGLIVLLV+GGLL  FLVGN+ LY YAQK LPP+KKKPVSKKKMK+E++KQGV  PGE
Subjt:  EARGFNPGLIVLLVVGGLLFAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGVSAPGE
Arabidopsis top hitse value%identityAlignment
AT2G37120.1 S1FA-like DNA-binding protein9.2e-2275Show/hide
Query:  EARGFNPGLIVLLVVGGLLFAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGVSAPGE
        EA+G NPGLIVLLV+GGLL  FL+ NY +YMYAQK LPP+KKKP+SKKK+KRE+LKQGV  PGE
Subjt:  EARGFNPGLIVLLVVGGLLFAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGVSAPGE
AT3G09735.1 S1FA-like DNA-binding protein1.6e-2175Show/hide
Query:  EARGFNPGLIVLLVVGGLLFAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGVSAPGE
        E++G NPGLIVLLV+GGLL  FLVGN+ LY YAQK LPP+KKKPVSKKKMK+E++KQGV  PGE
Subjt:  EARGFNPGLIVLLVVGGLLFAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGVSAPGE
AT3G53370.1 S1FA-like DNA-binding protein2.7e-2176.56Show/hide
Query:  EARGFNPGLIVLLVVGGLLFAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGVSAPGE
        EA+G NPGLIVLLVVGG L  FL+ NY LY+YAQK LPP+KKKPVSKKK+KRE+LKQGV  PGE
Subjt:  EARGFNPGLIVLLVVGGLLFAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGVSAPGE
AT3G53370.2 S1FA-like DNA-binding protein3.8e-0775.76Show/hide
Query:  YAQKTLPPKKKKPVSKKKMKRERLKQGVSAPGE
        +A K LPP+KKKPVSKKK+KRE+LKQGV  PGE
Subjt:  YAQKTLPPKKKKPVSKKKMKRERLKQGVSAPGE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGACGATTTCGACTTCGGCGACAAGGTCCCGCCGGCCGTTAACCGCATGAGGAATGTGATTAGAGATGGAGAAGCAAGAGGATTCAACCCAGGACTGATTGTGCT
GCTTGTAGTTGGTGGGTTGCTATTTGCATTTCTTGTTGGGAATTATGCTCTCTACATGTATGCCCAGAAAACACTCCCACCAAAAAAGAAGAAACCAGTTTCCAAAAAGA
AGATGAAGAGGGAGAGATTGAAGCAAGGTGTCTCTGCTCCCGGAGAGTAG
mRNA sequenceShow/hide mRNA sequence
CCCATGGCCATGGGCGGAAATATCGTAAATCCACTCACTATCCGCCATTTTCATATCTCCGCTCCTTTTGTATTTTTTCTCGAAGCTTCGTCAGTTCATCTTTTTGGTAC
ATAACTACAACACCAGCTCTCTCCGATTCTCAATTTCAGCCATGGAAGACGATTTCGACTTCGGCGACAAGGTCCCGCCGGCCGTTAACCGCATGAGGAATGTGATTAGA
GATGGAGAAGCAAGAGGATTCAACCCAGGACTGATTGTGCTGCTTGTAGTTGGTGGGTTGCTATTTGCATTTCTTGTTGGGAATTATGCTCTCTACATGTATGCCCAGAA
AACACTCCCACCAAAAAAGAAGAAACCAGTTTCCAAAAAGAAGATGAAGAGGGAGAGATTGAAGCAAGGTGTCTCTGCTCCCGGAGAGTAGAAGTGTAGTGGTAGACTTT
TCTCTTATGTTTTGTATGCCTGTTCCTGATTTGGTTGAACTAACAAGTTCTACCAAATGAATGTCAATGTTTGAAGAGTTGTTTTCCTTACGTTGTTAAGTTGGTTAGAA
TCTGAACATATAAGTTGAGGTTTATTGTCGCTTGTATCCTTAGAGATGAGAAATAATAAGAATATAGTTTATGTAGTATATTTTGATCCAATGCTAACCTTTTGGTACCC
CTCCTAGAATTTTCTTATCCAC
Protein sequenceShow/hide protein sequence
MEDDFDFGDKVPPAVNRMRNVIRDGEARGFNPGLIVLLVVGGLLFAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGVSAPGE