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IVF0018397 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0018397
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptioncentromere protein V isoform X1
Genome locationchr03:21070257..21070451
RNA-Seq ExpressionIVF0018397
SyntenyIVF0018397
Gene Ontology termsGO:0016846 - carbon-sulfur lyase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_016903270.1 PREDICTED: centromere protein V isoform X1 [Cucumis melo]2.15e-30100Show/hide
Query:  TIPSSPTIAFVHPWAIEKSDSKDCAGAFDLSLRSRAPLHGFLPLDRKHGRAYI
        TIPSSPTIAFVHPWAIEKSDSKDCAGAFDLSLRSRAPLHGFLPLDRKHGRAYI
Subjt:  TIPSSPTIAFVHPWAIEKSDSKDCAGAFDLSLRSRAPLHGFLPLDRKHGRAYI
TrEMBL top hitse value%identityAlignment
A0A1S4E5L6 centromere protein V isoform X14.7e-23100Show/hide
Query:  TIPSSPTIAFVHPWAIEKSDSKDCAGAFDLSLRSRAPLHGFLPLDRKHGRAYI
        TIPSSPTIAFVHPWAIEKSDSKDCAGAFDLSLRSRAPLHGFLPLDRKHGRAYI
Subjt:  TIPSSPTIAFVHPWAIEKSDSKDCAGAFDLSLRSRAPLHGFLPLDRKHGRAYI
A0A5D3CJK9 Centromere protein V isoform X14.7e-23100Show/hide
Query:  TIPSSPTIAFVHPWAIEKSDSKDCAGAFDLSLRSRAPLHGFLPLDRKHGRAYI
        TIPSSPTIAFVHPWAIEKSDSKDCAGAFDLSLRSRAPLHGFLPLDRKHGRAYI
Subjt:  TIPSSPTIAFVHPWAIEKSDSKDCAGAFDLSLRSRAPLHGFLPLDRKHGRAYI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTATTAAGGGGTGCTGTTTGATTAAAGGTACCATCCCCAGTAGTCCAACCATTGCTTTCGTTCATCCATGGGCAATAGAGAAGTCTGACTCAAAGGACTGTGCCGG
GGCCTTTGATCTTTCTCTTAGATCTCGTGCACCGCTACATGGCTTTCTTCCTCTTGATCGTAAACATGGTCGAGCCTATATCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTATTAAGGGGTGCTGTTTGATTAAAGGTACCATCCCCAGTAGTCCAACCATTGCTTTCGTTCATCCATGGGCAATAGAGAAGTCTGACTCAAAGGACTGTGCCGG
GGCCTTTGATCTTTCTCTTAGATCTCGTGCACCGCTACATGGCTTTCTTCCTCTTGATCGTAAACATGGTCGAGCCTATATCTAA
Protein sequenceShow/hide protein sequence
MSIKGCCLIKGTIPSSPTIAFVHPWAIEKSDSKDCAGAFDLSLRSRAPLHGFLPLDRKHGRAYI