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IVF0018408 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0018408
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein, putative, Ty3-gypsy subclass
Genome locationchr07:8914230..8914433
RNA-Seq ExpressionIVF0018408
SyntenyIVF0018408
Gene Ontology termsGO:0005488 - binding (molecular function)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031468.1 hypothetical protein E6C27_scaffold139G002280 [Cucumis melo var. makuwa]7.57e-0856Show/hide
Query:  MGLFSTHKNVGNSVKYVGKIILDAKSCVGKTVGRNASGDLFPTHHQQGVG
        M +  THK VG + KYVGK   D ++ VGK VGRNAS + FPT +Q GVG
Subjt:  MGLFSTHKNVGNSVKYVGKIILDAKSCVGKTVGRNASGDLFPTHHQQGVG
KAA0037655.1 hypothetical protein E6C27_scaffold277G003180 [Cucumis melo var. makuwa]8.31e-0957.14Show/hide
Query:  GLFSTHKNVGNSVKYVGKIILDAKSCVGKTVGRNASGDLFPTHHQQGVG
        G+  T KNVG + KYVG    D  + VGK VGRNASG+ FPT +Q+GVG
Subjt:  GLFSTHKNVGNSVKYVGKIILDAKSCVGKTVGRNASGDLFPTHHQQGVG
KAA0039107.1 hypothetical protein E6C27_scaffold84G002100 [Cucumis melo var. makuwa]9.56e-1254.1Show/hide
Query:  HKNVGNSVKYVGKIILDAKSCVGKTVGRNASGDLFPTHHQQGVGNTLLPKSSFLTLLLRRK
        HKNV  S K +GK I + +S + K VGRN  G+ FP  HQQG+GN LLP SS LT  +RR+
Subjt:  HKNVGNSVKYVGKIILDAKSCVGKTVGRNASGDLFPTHHQQGVGNTLLPKSSFLTLLLRRK
KAA0059110.1 hypothetical protein E6C27_scaffold430G00170 [Cucumis melo var. makuwa]1.08e-0858Show/hide
Query:  MGLFSTHKNVGNSVKYVGKIILDAKSCVGKTVGRNASGDLFPTHHQQGVG
        MG+  THK VG + KYVGK   D ++ VGK VGRNAS + FPT +Q GVG
Subjt:  MGLFSTHKNVGNSVKYVGKIILDAKSCVGKTVGRNASGDLFPTHHQQGVG
TYJ98946.1 hypothetical protein E5676_scaffold248G001470 [Cucumis melo var. makuwa]7.57e-0856Show/hide
Query:  MGLFSTHKNVGNSVKYVGKIILDAKSCVGKTVGRNASGDLFPTHHQQGVG
        M +  THK VG + KYVGK   D ++ VGK VGRNAS + FPT +Q GVG
Subjt:  MGLFSTHKNVGNSVKYVGKIILDAKSCVGKTVGRNASGDLFPTHHQQGVG
TrEMBL top hitse value%identityAlignment
A0A5A7TBZ3 Uncharacterized protein5.8e-0854.1Show/hide
Query:  HKNVGNSVKYVGKIILDAKSCVGKTVGRNASGDLFPTHHQQGVGNTLLPKSSFLTLLLRRK
        HKNV  S K +GK I + +S + K VGRN  G+ FP  HQQG+GN LLP SS LT  +RR+
Subjt:  HKNVGNSVKYVGKIILDAKSCVGKTVGRNASGDLFPTHHQQGVGNTLLPKSSFLTLLLRRK
A0A5A7TPM2 Uncharacterized protein7.1e-0658.33Show/hide
Query:  GLFSTHKNVGNSVKYVGKIILDAKSCVGKTVGRNASGDLFPTHHQQGV
        G+  THKNVG S KYVGK   D    VG  VGRN SG++FPT +Q GV
Subjt:  GLFSTHKNVGNSVKYVGKIILDAKSCVGKTVGRNASGDLFPTHHQQGV
A0A5A7UVI4 Uncharacterized protein1.4e-0658Show/hide
Query:  MGLFSTHKNVGNSVKYVGKIILDAKSCVGKTVGRNASGDLFPTHHQQGVG
        MG+  THK VG + KYVGK   D ++ VGK VGRNAS + FPT +Q GVG
Subjt:  MGLFSTHKNVGNSVKYVGKIILDAKSCVGKTVGRNASGDLFPTHHQQGVG
A0A5D3DHG4 Uncharacterized protein9.2e-0657.14Show/hide
Query:  GLFSTHKNVGNSVKYVGKIILDAKSCVGKTVGRNASGDLFPTHHQQGVG
        G+  T KNVG + KYVG    D  + VGK VGRNASG+ FPT +Q+GVG
Subjt:  GLFSTHKNVGNSVKYVGKIILDAKSCVGKTVGRNASGDLFPTHHQQGVG
A0A5D3E0P4 Uncharacterized protein1.6e-0556Show/hide
Query:  MGLFSTHKNVGNSVKYVGKIILDAKSCVGKTVGRNASGDLFPTHHQQGVG
        M +  THK VG + KYVGK   D ++ VGK VGRNAS + FPT +Q GVG
Subjt:  MGLFSTHKNVGNSVKYVGKIILDAKSCVGKTVGRNASGDLFPTHHQQGVG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCTATTTTCGACGCACAAAAACGTTGGGAATAGTGTAAAATACGTCGGAAAAATAATTCTCGACGCAAAATCGTGCGTTGGGAAGACCGTCGGAAGAAACGCGTC
AGGAGACCTTTTCCCGACACATCACCAACAAGGCGTCGGAAATACCCTTCTCCCGAAGTCATCTTTTCTGACGTTGTTGTTGCGTCGGAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGCTATTTTCGACGCACAAAAACGTTGGGAATAGTGTAAAATACGTCGGAAAAATAATTCTCGACGCAAAATCGTGCGTTGGGAAGACCGTCGGAAGAAACGCGTC
AGGAGACCTTTTCCCGACACATCACCAACAAGGCGTCGGAAATACCCTTCTCCCGAAGTCATCTTTTCTGACGTTGTTGTTGCGTCGGAAATAA
Protein sequenceShow/hide protein sequence
MGLFSTHKNVGNSVKYVGKIILDAKSCVGKTVGRNASGDLFPTHHQQGVGNTLLPKSSFLTLLLRRK