; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0018409 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0018409
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRNA-binding protein 2-like isoform X1
Genome locationchr06:2274240..2279616
RNA-Seq ExpressionIVF0018409
SyntenyIVF0018409
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050536.1 RNA-binding protein 2-like isoform X1 [Cucumis melo var. makuwa]1.56e-16888.41Show/hide
Query:  MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTTGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHLMNDPPIL
        MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTTGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHLMNDPPIL
Subjt:  MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTTGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHLMNDPPIL

Query:  GIGGVVSGANVNDRSTSFGGGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQGV
        GIGGVVSGANVNDRSTSFGGGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQ  
Subjt:  GIGGVVSGANVNDRSTSFGGGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQGV

Query:  LASALIINFFAFVFWLLNICASFCLLTEVTIGEFVPSIYIFILACLEGKVVYLSSFCIIRDVLLLVSNVFTQTWVH
                                   EV IGEFVPSIYIFILACLEGKVVYLSSFC+IRDVLLLVSNVFTQTW H
Subjt:  LASALIINFFAFVFWLLNICASFCLLTEVTIGEFVPSIYIFILACLEGKVVYLSSFCIIRDVLLLVSNVFTQTWVH

XP_008455994.1 PREDICTED: RNA-binding protein 2-like isoform X1 [Cucumis melo]2.35e-17789.2Show/hide
Query:  MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTTGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHLMNDPPIL
        MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTTGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHLMNDPPIL
Subjt:  MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTTGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHLMNDPPIL

Query:  GIGGVVSGANVNDRSTSFGGGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQGV
        GIGGVVSGANVNDRSTSFGGGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQ  
Subjt:  GIGGVVSGANVNDRSTSFGGGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQGV

Query:  LASALIINFFAFVFWLLNICASFCLLTEVTIGEFVPSIYIFILACLEGKVVYLSSFCIIRDVLLLVSNVFTQTWVHLSLYVFISCLR
                                   EV IGEFVPSIYIFILACLEGKVVYLSSFC+IRDVLLLVSNVFTQTWVHLSLYVFISCLR
Subjt:  LASALIINFFAFVFWLLNICASFCLLTEVTIGEFVPSIYIFILACLEGKVVYLSSFCIIRDVLLLVSNVFTQTWVHLSLYVFISCLR

XP_011651307.1 RNA-binding protein 2 isoform X1 [Cucumis sativus]8.77e-15886.14Show/hide
Query:  MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTTGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHLMNDPPIL
        MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDT+GLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGH MNDPPIL
Subjt:  MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTTGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHLMNDPPIL

Query:  GIGGVVSGANVNDRSTSFGGGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQGV
        G+GGVVSGANVNDRSTSFGGGRPN+PLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQ  
Subjt:  GIGGVVSGANVNDRSTSFGGGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQGV

Query:  LASALIINFFAFVFWLLNICASFCLLTEVTIGEFVPSIYIFILACLEGKVVYLSSFCIIRDVLLLVS
                                   EVTIGEFVPSIYIFILACL+GKVVY SSFC+IRDVLL VS
Subjt:  LASALIINFFAFVFWLLNICASFCLLTEVTIGEFVPSIYIFILACLEGKVVYLSSFCIIRDVLLLVS

XP_016901920.1 PREDICTED: RNA-binding protein 2-like isoform X5 [Cucumis melo]1.46e-141100Show/hide
Query:  MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTTGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHLMNDPPIL
        MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTTGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHLMNDPPIL
Subjt:  MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTTGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHLMNDPPIL

Query:  GIGGVVSGANVNDRSTSFGGGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQG
        GIGGVVSGANVNDRSTSFGGGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQG
Subjt:  GIGGVVSGANVNDRSTSFGGGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQG

XP_023553421.1 RNA-binding protein 2-like isoform X1 [Cucurbita pepo subsp. pepo]5.44e-15083.02Show/hide
Query:  MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTTGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHLMNDPP-I
        MSDAYWRY+DSQQQPPSSVP V GKRPRVDYDT+G H+LPNYYPRQDDRP+LQGIKSVDSINESYERYLR+++ISSYGGQSARPVGGGVPGH +NDPP I
Subjt:  MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTTGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHLMNDPP-I

Query:  LGIGGVVSGANVNDRSTSFGGGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQG
        +GIGGVVSGANVNDRS SFGGGRPN+PLPPDASNTLFVEGLPSSCTRRE+AHIFRPFVGYKEVRLVNKESR+ GRDPVVLGFVDFVSPAHAATAMDALQG
Subjt:  LGIGGVVSGANVNDRSTSFGGGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQG

Query:  VLASALIINFFAFVFWLLNICASFCLLTEVTIGE-FVPSIYIFILACLEGKVVYLSSFCIIRDVL
        VLA ALIINFF  VFWLLNIC    +  ++++ E +VP IYIFIL CL  KV++LS  CII DVL
Subjt:  VLASALIINFFAFVFWLLNICASFCLLTEVTIGE-FVPSIYIFILACLEGKVVYLSSFCIIRDVL

TrEMBL top hitse value%identityAlignment
A0A1S3C2W2 RNA-binding protein 2-like isoform X11.8e-13889.2Show/hide
Query:  MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTTGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHLMNDPPIL
        MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTTGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHLMNDPPIL
Subjt:  MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTTGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHLMNDPPIL

Query:  GIGGVVSGANVNDRSTSFGGGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQGV
        GIGGVVSGANVNDRSTSFGGGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQ  
Subjt:  GIGGVVSGANVNDRSTSFGGGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQGV

Query:  LASALIINFFAFVFWLLNICASFCLLTEVTIGEFVPSIYIFILACLEGKVVYLSSFCIIRDVLLLVSNVFTQTWVHLSLYVFISCLR
                                   EV IGEFVPSIYIFILACLEGKVVYLSSFC+IRDVLLLVSNVFTQTWVHLSLYVFISCLR
Subjt:  LASALIINFFAFVFWLLNICASFCLLTEVTIGEFVPSIYIFILACLEGKVVYLSSFCIIRDVLLLVSNVFTQTWVHLSLYVFISCLR

A0A1S4E1R0 RNA-binding protein 2-like isoform X59.1e-111100Show/hide
Query:  MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTTGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHLMNDPPIL
        MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTTGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHLMNDPPIL
Subjt:  MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTTGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHLMNDPPIL

Query:  GIGGVVSGANVNDRSTSFGGGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQG
        GIGGVVSGANVNDRSTSFGGGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQG
Subjt:  GIGGVVSGANVNDRSTSFGGGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQG

A0A5A7U8N8 RNA-binding protein 2-like isoform X17.2e-13288.41Show/hide
Query:  MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTTGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHLMNDPPIL
        MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTTGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHLMNDPPIL
Subjt:  MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTTGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHLMNDPPIL

Query:  GIGGVVSGANVNDRSTSFGGGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQGV
        GIGGVVSGANVNDRSTSFGGGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQ  
Subjt:  GIGGVVSGANVNDRSTSFGGGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQGV

Query:  LASALIINFFAFVFWLLNICASFCLLTEVTIGEFVPSIYIFILACLEGKVVYLSSFCIIRDVLLLVSNVFTQTWVH
                                   EV IGEFVPSIYIFILACLEGKVVYLSSFC+IRDVLLLVSNVFTQTW H
Subjt:  LASALIINFFAFVFWLLNICASFCLLTEVTIGEFVPSIYIFILACLEGKVVYLSSFCIIRDVLLLVSNVFTQTWVH

A0A5D3CIZ5 RNA-binding protein 2-like isoform X41.4e-11198.54Show/hide
Query:  MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTTGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHLMNDPPIL
        MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTTGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHLMNDPPIL
Subjt:  MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTTGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHLMNDPPIL

Query:  GIGGVVSGANVNDRSTSFGGGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQGV
        GIGGVVSGANVNDRSTSFGGGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQG+
Subjt:  GIGGVVSGANVNDRSTSFGGGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQGV

Query:  LASAL
        L S L
Subjt:  LASAL

A0A6J1E5U3 RNA-binding protein 2-like isoform X12.4e-11183.27Show/hide
Query:  MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTTGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHLMND-PPI
        MSDAYWRY+DSQQQPPSSVP V GKRPRVDYDT+G H+LP+YYPRQDDRP+LQGIKSVDSINESYERYLR+S+ISSYGGQSARPVGGGVPGH +ND PPI
Subjt:  MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTTGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHLMND-PPI

Query:  LGIGGVVSGANVNDRSTSFGGGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQG
        +GIGGVVSGANVNDRS SFGGGRPN+PLPPDASNTLFVEGLPSSCTRRE+AHIFRPFVGYKEVRLVNKESR+ GRDPVVLGFVDFVSPAHAATAMDALQG
Subjt:  LGIGGVVSGANVNDRSTSFGGGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQG

Query:  VLASALIINFFAFVFWLLNICASFCLLTEVTIGE-FVPSIYIFILACLEGK
        VLA ALII FF  VFWLLNIC    +  ++++ E +VP IYIFIL  L  K
Subjt:  VLASALIINFFAFVFWLLNICASFCLLTEVTIGE-FVPSIYIFILACLEGK

SwissProt top hitse value%identityAlignment
A1A6K6 Nuclear speckle RNA-binding protein A1.5e-3345.24Show/hide
Query:  MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYD----TTGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHLMN-
        M+D YW     Q  PP    P+  KRPR D++    T  +     YYPR +D  V        +I  +Y+RYL++ Q    G  S    GGG  G   N 
Subjt:  MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYD----TTGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHLMN-

Query:  ---DPPILGIGGVVS-GANVNDRSTSFGGGRP--NIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAH
           D  +L  GGV+      N  +  F    P     LP DASNTL+VEGLPS+C+RREVAHIFRPFVGY+EVRLV K+S+    DP+VL FVDF +PA 
Subjt:  ---DPPILGIGGVVS-GANVNDRSTSFGGGRP--NIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAH

Query:  AATAMDALQG
        AATA+ ALQG
Subjt:  AATAMDALQG

F4HWF9 Nuclear speckle RNA-binding protein B2.9e-2943.58Show/hide
Query:  ELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGG----------GVPGHLMNDPPILGIGG-VVSGANVNDRSTSFG-------
        ++ +Y  + +DR +   +K   SI  +Y+RYL++ Q      + A P  G           +PG  M +  + G GG + S    N R   FG       
Subjt:  ELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGG----------GVPGHLMNDPPILGIGG-VVSGANVNDRSTSFG-------

Query:  GGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQ
         GR   PLPPD SNTL+VEGLPS+C+RREV+HIFRPFVGY+EVRLV ++S+    DP VL FVDF + A AATA+ ALQ
Subjt:  GGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQ

G7ID19 RNA-binding protein 23.4e-3842.67Show/hide
Query:  MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDT-----TGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVG--------G
        M+D +W        PP  +     KRPR +YDT     T  +E+ NY  + +   +L   K + S   +Y+R+L+++ ++S+    A  +G        G
Subjt:  MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDT-----TGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVG--------G

Query:  GVPGHLMNDPPILG-IGGVVSGANV--NDRSTSFGG----------GRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGR
         +PGH + DP  +G + GV  G ++  N R  +FGG          G   IPLP DAS+TL+VEGLPS  T+REVAHIFRPFVGY+EVRLV KES+  G 
Subjt:  GVPGHLMNDPPILG-IGGVVSGANV--NDRSTSFGG----------GRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGR

Query:  DPVVLGFVDFVSPAHAATAMDALQG
        DP++L FVDF +PA AATA+ ALQG
Subjt:  DPVVLGFVDFVSPAHAATAMDALQG

Q6JB11 Protein MATERNALLY EXPRESSED GENE 51.2e-2772.5Show/hide
Query:  GGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQG
        GGRP  PLPPDAS+TL++EGLP++CTRREV+HIFRPFVG++EVRLVNKESR  G DP VL FVDF +PA A  A++ALQG
Subjt:  GGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQG

Q8H0P8 RNA-binding protein 13.9e-3444.25Show/hide
Query:  MSDAYWRYTDSQQQPPSSVPPVVG--KRPRVDYD--TTGL---HELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVG-------
        M+D YW    ++QQ   S+ P  G  KRPR DY+   +GL   +E+ +Y  R++DR     +K   +I  +Y+RYL+  Q+ S+    A  VG       
Subjt:  MSDAYWRYTDSQQQPPSSVPPVVG--KRPRVDYD--TTGL---HELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVG-------

Query:  -GGVPGHLMNDPPIL--GIGGVVSGANVNDRSTSFGGGRPNIP----------LPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAG
         GG+P H ++DP  +    GG       N R  ++G   P  P          LPPDAS TL++EGLPS CTRREVAHIFRPFVGY+EVRLV+KE++  G
Subjt:  -GGVPGHLMNDPPIL--GIGGVVSGANVNDRSTSFGGGRPNIP----------LPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAG

Query:  RDPVVLGFVDFVSPAHAATAMDALQG
         DP++L FVDF +PA AATA+ ALQG
Subjt:  RDPVVLGFVDFVSPAHAATAMDALQG

Arabidopsis top hitse value%identityAlignment
AT1G21320.1 nucleotide binding;nucleic acid binding2.1e-3043.58Show/hide
Query:  ELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGG----------GVPGHLMNDPPILGIGG-VVSGANVNDRSTSFG-------
        ++ +Y  + +DR +   +K   SI  +Y+RYL++ Q      + A P  G           +PG  M +  + G GG + S    N R   FG       
Subjt:  ELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGG----------GVPGHLMNDPPILGIGG-VVSGANVNDRSTSFG-------

Query:  GGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQ
         GR   PLPPD SNTL+VEGLPS+C+RREV+HIFRPFVGY+EVRLV ++S+    DP VL FVDF + A AATA+ ALQ
Subjt:  GGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQ

AT1G21320.2 nucleotide binding;nucleic acid binding1.6e-3542.53Show/hide
Query:  MSDAYWRYTDSQQQPPSSVPPVV-GKRPRVDYDTTGL----HELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGG--------
        M+D YW      Q P SS P V+  KRPR D+  T       ++ +Y  + +DR +   +K   SI  +Y+RYL++ Q      + A P  G        
Subjt:  MSDAYWRYTDSQQQPPSSVPPVV-GKRPRVDYDTTGL----HELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGG--------

Query:  --GVPGHLMNDPPILGIGG-VVSGANVNDRSTSFG-------GGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPV
           +PG  M +  + G GG + S    N R   FG        GR   PLPPD SNTL+VEGLPS+C+RREV+HIFRPFVGY+EVRLV ++S+    DP 
Subjt:  --GVPGHLMNDPPILGIGG-VVSGANVNDRSTSFG-------GGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPV

Query:  VLGFVDFVSPAHAATAMDALQ
        VL FVDF + A AATA+ ALQ
Subjt:  VLGFVDFVSPAHAATAMDALQ

AT1G76940.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.1e-3445.24Show/hide
Query:  MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYD----TTGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHLMN-
        M+D YW     Q  PP    P+  KRPR D++    T  +     YYPR +D  V        +I  +Y+RYL++ Q    G  S    GGG  G   N 
Subjt:  MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYD----TTGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHLMN-

Query:  ---DPPILGIGGVVS-GANVNDRSTSFGGGRP--NIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAH
           D  +L  GGV+      N  +  F    P     LP DASNTL+VEGLPS+C+RREVAHIFRPFVGY+EVRLV K+S+    DP+VL FVDF +PA 
Subjt:  ---DPPILGIGGVVS-GANVNDRSTSFGGGRP--NIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAH

Query:  AATAMDALQG
        AATA+ ALQG
Subjt:  AATAMDALQG

AT1G76940.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.5e-2553.03Show/hide
Query:  GGQSARP------VGGGVPGHLMN-DPPILGIGGVVS-GANVNDRSTSFGGGRP--NIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNK
        GG   RP       GGG  G++   D  +L  GGV+      N  +  F    P     LP DASNTL+VEGLPS+C+RREVAHIFRPFVGY+EVRLV K
Subjt:  GGQSARP------VGGGVPGHLMN-DPPILGIGGVVS-GANVNDRSTSFGGGRP--NIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNK

Query:  ESRSAGRDPVVLGFVDFVSPAHAATAMDALQG
        +S+    DP+VL FVDF +PA AATA+ ALQG
Subjt:  ESRSAGRDPVVLGFVDFVSPAHAATAMDALQG

AT2G47580.1 spliceosomal protein U1A1.8e-0532.93Show/hide
Query:  GGGRPNIP-LPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQG
        GG +PN+P  P   +N LFV+ LP   T   +  +F  + G+KEVR++  +          + FV+F     +  AM  LQG
Subjt:  GGGRPNIP-LPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGACGCTTACTGGAGGTATACCGACTCACAGCAGCAGCCTCCGTCGTCGGTTCCGCCCGTCGTCGGCAAGCGCCCTCGCGTCGATTACGATACCACTGGTCTTCA
CGAGCTGCCCAACTACTATCCACGTCAAGATGATAGGCCAGTTCTCCAAGGAATTAAAAGTGTTGATTCCATCAATGAGTCCTATGAACGTTACCTACGCACCTCGCAAA
TTTCATCTTATGGTGGACAGTCTGCTAGACCTGTTGGTGGGGGCGTTCCTGGTCATCTGATGAATGACCCACCTATCTTGGGCATTGGGGGTGTGGTTTCAGGGGCAAAT
GTTAATGACAGAAGTACGAGCTTTGGAGGTGGGAGGCCTAACATACCCCTTCCACCTGATGCTTCTAATACACTATTTGTGGAAGGCTTGCCTTCCAGCTGTACCAGGCG
TGAAGTAGCTCACATATTTCGCCCTTTTGTTGGCTACAAAGAAGTAAGACTTGTTAACAAGGAATCCAGAAGTGCTGGAAGAGATCCAGTGGTGCTTGGTTTTGTAGATT
TTGTGAGTCCTGCCCATGCAGCCACGGCCATGGATGCCTTACAAGGTGTGCTTGCATCTGCTTTAATTATTAATTTCTTTGCCTTTGTTTTCTGGCTGTTAAACATTTGC
GCTTCTTTTTGTCTCCTGACAGAGGTCACTATTGGAGAATTTGTGCCTTCAATTTATATATTTATTTTGGCTTGTCTTGAAGGAAAAGTTGTCTATTTGTCTTCCTTTTG
CATAATTCGTGATGTCCTTCTTTTGGTGTCTAATGTCTTTACCCAAACATGGGTACATCTCTCTTTATATGTCTTTATTAGTTGTTTGAGATAG
mRNA sequenceShow/hide mRNA sequence
ATTGAAATGAGATTAAAACAATGGCGTAATGGAAAAGAAAAACTATTTCTAACCATTATTCAACAAAATTTATTATTCATAACTTACACACCCAAATTGTTCAATTTGAT
ATACAAAATTATAAGAGAGAGGAGGCGGCAGTGTTGGATTATGTTGTGATGTGTGTTGTGTTGTTACGAACTTTGCAAGAAATCGTGAGAGAAAAGAAAAATATATATTA
TAGATATCATAGATCGTCCCCTTCAACTTGAGCATGTCGGACGCTTACTGGAGGTATACCGACTCACAGCAGCAGCCTCCGTCGTCGGTTCCGCCCGTCGTCGGCAAGCG
CCCTCGCGTCGATTACGATACCACTGGTCTTCACGAGCTGCCCAACTACTATCCACGTCAAGATGATAGGCCAGTTCTCCAAGGAATTAAAAGTGTTGATTCCATCAATG
AGTCCTATGAACGTTACCTACGCACCTCGCAAATTTCATCTTATGGTGGACAGTCTGCTAGACCTGTTGGTGGGGGCGTTCCTGGTCATCTGATGAATGACCCACCTATC
TTGGGCATTGGGGGTGTGGTTTCAGGGGCAAATGTTAATGACAGAAGTACGAGCTTTGGAGGTGGGAGGCCTAACATACCCCTTCCACCTGATGCTTCTAATACACTATT
TGTGGAAGGCTTGCCTTCCAGCTGTACCAGGCGTGAAGTAGCTCACATATTTCGCCCTTTTGTTGGCTACAAAGAAGTAAGACTTGTTAACAAGGAATCCAGAAGTGCTG
GAAGAGATCCAGTGGTGCTTGGTTTTGTAGATTTTGTGAGTCCTGCCCATGCAGCCACGGCCATGGATGCCTTACAAGGTGTGCTTGCATCTGCTTTAATTATTAATTTC
TTTGCCTTTGTTTTCTGGCTGTTAAACATTTGCGCTTCTTTTTGTCTCCTGACAGAGGTCACTATTGGAGAATTTGTGCCTTCAATTTATATATTTATTTTGGCTTGTCT
TGAAGGAAAAGTTGTCTATTTGTCTTCCTTTTGCATAATTCGTGATGTCCTTCTTTTGGTGTCTAATGTCTTTACCCAAACATGGGTACATCTCTCTTTATATGTCTTTA
TTAGTTGTTTGAGATAGTTAAGTTAAAATTAAAAAGCAAAATGCAGGGTAGCTGAACAGCAGTGTGGAATCAGTTTGTTTTTAGTTAGTACCACTCAACCTCCTTCATTA
CTCATGCAGCCACACGCCGAATATGGAAATAAAGGTGCGACTGCATGAGCACATATGATTCAGCAATGTAATTGATAGATTTTTTTGTTAGGAAGCCAAGGAAGCTAGGC
TGTTTTGTTGGGCTTGTTAAAGGGTATAGGCATTATTATTAGCATTTGACTATTGAGCTCCCTCTAGTTTCCTGCCTCCTTGAATATGAGATTAAGTTGAAAGCCCCAGT
TTTAAAAGAGAGTGATGTACAAGGAAACAATTCATAGGTTATGTATCATTTTATCGACGTCAACAACAGTATTGATGGCATGTGGGAAATTTATCTTAAGTGGCTGCCAC
ATTTCATATTGGGTGCATGGTTAAAACACATCTTTCAATCTCATGCATTTGACAGTTTATGTAACATATGTGACGGCCACATTAAATCATCCCTTCATTGTTGGGGATGT
ACTTCTTATATGTATTTGTTTGGCTCTCTCCTCTCCAAGGTGGGAATGTGTTTGCATCTGTATCATAACTCATAGGGCTCTTAGACTCCAAGTTGTGTGGCTTGAAGAAT
TTGAGTGTCGATCCTATCCTGCATTCGGCCAGTAGGAAATCTGGTTAGTTTTGTACTTGGTGTCATAGATTATTCGGTCCAGTACCTCATGTTTACTTTCAGTTCAGCAG
ATGTGAAGCTTATCACATTTAAGGCAGATTGGTTTTGAAGTTTAACTATTGTCTTGATTCACACGGCGTTGTGGGTTCTGGTAATGATAAATTTTGTTTAATAGTTTAAT
TGGGTTTATTATCTCTATGGTCTTTTGACCAAACATTCTAGATCCTTAATCTTAGCGTCAAAATGTTTACTTGGATTTGGATTCGTAGGCGTCAATTGTTAGAAAGACTA
AATCATGATTGCTGAACTCAACCATGAGATCATACGTCCAAGCGTGTAATAAGGTCCTTTGTGATGTGCCCTTTTGAATTAAGTAGTAGAGTTGATTATGATAAATCATA
AAGGTGAATATTAGACTATTTACGATTCAAATCATTTTACACGTCTTGCATCCGATATCTGTTCTTTTCCTACCTCGTCGTTCTACACGTAGCTACTACATATATTAGTC
AGAGCTCGATTTTGCAGGTTATAAATTCGATGAATTTGACCGTGACTCGGTCAATTTAAGGTTGCAATTTGCTCGCTTTCCTGGTGCAAGGTCAGGTGGCGGGCATCGTG
GAAAGCGTTGAATTATGCGATTTCACAGGATTTGCGCATACGGTGAAGTAATGAATTTGAGGCAATGTGACAGTCGGATATCAAAAACTGGAGCGTATTAGTTAGGGCCG
ACCAAATTCGTAAACACTAATTTGTGATGAAATATGGTGATTTGGAGCGTTCTTTTATGTTTACAACCTCACTGTTTTTATACGTCTTGCTATGAACGTGTTGTTGAGCT
GTGCTGTGGGATAAAATTTTCATTTGCTCATTATTTTCGGCTAGCGAGAATTTTGATCCGACAATATCCAGACGTGAGTTTAGTGATGAAAGAAAGTCGTATTATAAGAT
TAATACTCATTGTTGTGTTTACTTCAATTTTAAATTTATAACTATGTTCCAAAGCTGTGCATGTTTTATTTGAGAAGAGTTTTGTTATCTGCGATGTGATCAGCTGGAGA
AAAACCGAATTCTTCCTATATCTACATGGTATGAAAACTTATTAGAAACCTCTTGTTCCTGGGTCTACCAAATCCTGTAAATTGGAGAATTCGTATTTGAGATGTTTCAT
GGTTCCTTGCAGCTTGGATCATTATTATTCGTTGTTTTTTGACCTCCGAATTCTTCAGGATTGATGACACTTTTCTGTCTCATATTTGAAGTGTTCTTTTCTCTTCGTTC
ATACGAGATTCGATATATGCAGTTCCTATATTGTGGAGTTGGATGAAGAATGCTAACAGATAACGAATATTATCTGACTTTTCTCCTTTGGGTTTCTTTATATGATTATG
AGTCTTCTAGCAAGCATCAAATTTGCATATTGTTTTGATTCTTGTGCTCCTTTGTACTTGTGAATGATTCAAATGATTAAGGGTTTCAACAACCAAACTGCTCTTTTTTC
TTCAGTCTATTACCTTAGTTGGTGGGTTAGGCCTTTTCTTTTCTCTCTTGGCTATGGAATAAGGTATGTGGGAAGTTGAATAGCAACATGATCCTGGTGGTGCAGAAATG
GACGACTTAGTCGAGAGCAAAATGGTGTACTCTGAGATTTAGAAGAAACCATCATTTTGAGTCTGAGGCATCTGCAATTTCTTGAGGGCAAGGGATGGAATCTTTATGAA
TGAAGTGCACCATAGGCTTTTATGATGTAAGATGGGAACTACAACATTTTCCAGTTCTGTTCATGATTCCACATCTTTTTATGACTGAGTTTGGAGAGAGTGGAGGTATT
TTAGGTGCGGCGTATTTCCTTTGGCTATGTAATCGTGTGGTTTTTGGAAAATGCAGACCTGATTTCCTCCGTAAATTCTCCAATTCAAATGGCAGAAAAGCTTCCATGTT
TATACCTTTTCTTGTTGGAGGGGCGACTGCCCATTGAACTACCATGAAAAAAGGGGGTGAGGAAAAGAATTTGAAATAGAAAGGTTATGAAATAGCGAGACCTGTCCAGT
GGAATTCATAGATTTGTTGCTTGGCTTTGCCCCTTTTCTCCAGGTTCATGCCCCTCTTCCTACGGCTCCTACTACGACACATGGTCCTCTATTGATTTAGGTGTGCTATT
GTATAGCATACCCCCAATTGTAGTAGCATAT
Protein sequenceShow/hide protein sequence
MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTTGLHELPNYYPRQDDRPVLQGIKSVDSINESYERYLRTSQISSYGGQSARPVGGGVPGHLMNDPPILGIGGVVSGAN
VNDRSTSFGGGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQGVLASALIINFFAFVFWLLNIC
ASFCLLTEVTIGEFVPSIYIFILACLEGKVVYLSSFCIIRDVLLLVSNVFTQTWVHLSLYVFISCLR