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IVF0018421 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0018421
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionNAD(P)H-quinone oxidoreductase subunit 3, chloroplastic
Genome locationchr02:20107312..20107674
RNA-Seq ExpressionIVF0018421
SyntenyIVF0018421
Gene Ontology termsGO:0019684 - photosynthesis, light reaction (biological process)
GO:0022900 - electron transport chain (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0031966 - mitochondrial membrane (cellular component)
GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
GO:0048038 - quinone binding (molecular function)
InterPro domainsIPR000440 - NADH:ubiquinone/plastoquinone oxidoreductase, chain 3
IPR023043 - NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid
IPR038430 - NADH:ubiquinone oxidoreductase, subunit 3 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QHB75968.1 NADH dehydrogenase subunit 3 [Cucumis melo subsp. melo]5.54e-6791.67Show/hide
Query:  MFLLYDYDIFWVFLIISSVIPILAFLISEVLAPLSKEPEKLSSYELGIEPIGNAWVQFRIRYYMFPLVFVVFDVETVFRYPWAMSFDVLRVSVFIEDLIF
        MFLLY+YDIFWVFLIISSVIPILAF+IS VLAPLSKEPEKLSSYE GIEP+G+AWVQFRIRYYMF LVFVVFDVETVF YPWAMSFDVL VSVFIE LIF
Subjt:  MFLLYDYDIFWVFLIISSVIPILAFLISEVLAPLSKEPEKLSSYELGIEPIGNAWVQFRIRYYMFPLVFVVFDVETVFRYPWAMSFDVLRVSVFIEDLIF

Query:  VLILIVGLVYAWRKGALEWS
        VLILIVGLVYAWRKGALEWS
Subjt:  VLILIVGLVYAWRKGALEWS

YP_009004049.1 NADH-plastoquinone oxidoreductase subunit 3 [Cucumis hystrix]2.74e-6792.5Show/hide
Query:  MFLLYDYDIFWVFLIISSVIPILAFLISEVLAPLSKEPEKLSSYELGIEPIGNAWVQFRIRYYMFPLVFVVFDVETVFRYPWAMSFDVLRVSVFIEDLIF
        MFLLY+YDIFWVFLIISSVIPILAFLIS VLAPLSKEPEKLSSYE GIEP+G+AWVQFRIRYYMF LVFVVFDVETVF YPWAMSFDVL VSVFIE LIF
Subjt:  MFLLYDYDIFWVFLIISSVIPILAFLISEVLAPLSKEPEKLSSYELGIEPIGNAWVQFRIRYYMFPLVFVVFDVETVFRYPWAMSFDVLRVSVFIEDLIF

Query:  VLILIVGLVYAWRKGALEWS
        VLILIVGLVYAWRKGALEWS
Subjt:  VLILIVGLVYAWRKGALEWS

YP_009236285.1 NADH-plastoquinone oxidoreductase subunit 3 [Gynostemma pentaphyllum]7.86e-6791.67Show/hide
Query:  MFLLYDYDIFWVFLIISSVIPILAFLISEVLAPLSKEPEKLSSYELGIEPIGNAWVQFRIRYYMFPLVFVVFDVETVFRYPWAMSFDVLRVSVFIEDLIF
        MFLLY+YDIFWVFLIISSVIPILAFLIS VLAPLSKEPEKLSSYE GIEP+G+AW+QFRIRYYMF LVFVVFDVETVF YPWAMSFDVL VSVFIE LIF
Subjt:  MFLLYDYDIFWVFLIISSVIPILAFLISEVLAPLSKEPEKLSSYELGIEPIGNAWVQFRIRYYMFPLVFVVFDVETVFRYPWAMSFDVLRVSVFIEDLIF

Query:  VLILIVGLVYAWRKGALEWS
        VLILIVGLVYAWRKGALEWS
Subjt:  VLILIVGLVYAWRKGALEWS

YP_009751658.1 NADH dehydrogenase subunit C [Hodgsonia heteroclita]3.90e-6791.67Show/hide
Query:  MFLLYDYDIFWVFLIISSVIPILAFLISEVLAPLSKEPEKLSSYELGIEPIGNAWVQFRIRYYMFPLVFVVFDVETVFRYPWAMSFDVLRVSVFIEDLIF
        MFLLY+YDIFWVFLIISSVIPILAFLIS +LAPLSKEPEKLSSYE GIEP+G+AWVQFRIRYYMF LVFVVFDVETVF YPWAMSFDVL VSVFIE LIF
Subjt:  MFLLYDYDIFWVFLIISSVIPILAFLISEVLAPLSKEPEKLSSYELGIEPIGNAWVQFRIRYYMFPLVFVVFDVETVFRYPWAMSFDVLRVSVFIEDLIF

Query:  VLILIVGLVYAWRKGALEWS
        VLILIVGLVYAWRKGALEWS
Subjt:  VLILIVGLVYAWRKGALEWS

YP_010131099.1 NADH-plastoquinone oxidoreductase subunit 3 [Benincasa hispida]5.54e-6791.67Show/hide
Query:  MFLLYDYDIFWVFLIISSVIPILAFLISEVLAPLSKEPEKLSSYELGIEPIGNAWVQFRIRYYMFPLVFVVFDVETVFRYPWAMSFDVLRVSVFIEDLIF
        MFLLY+YDIFWVFLIISSVIPILAFLIS VLAPLSKEPEKLSSYE GIEP+G+AWVQFRIRYYMF LVFVVFDVETVF YPWAMSFDVL VSVFIE +IF
Subjt:  MFLLYDYDIFWVFLIISSVIPILAFLISEVLAPLSKEPEKLSSYELGIEPIGNAWVQFRIRYYMFPLVFVVFDVETVFRYPWAMSFDVLRVSVFIEDLIF

Query:  VLILIVGLVYAWRKGALEWS
        VLILIVGLVYAWRKGALEWS
Subjt:  VLILIVGLVYAWRKGALEWS

TrEMBL top hitse value%identityAlignment
A0A1P8LFN3 NADH-quinone oxidoreductase subunit A4.4e-5192.5Show/hide
Query:  MFLLYDYDIFWVFLIISSVIPILAFLISEVLAPLSKEPEKLSSYELGIEPIGNAWVQFRIRYYMFPLVFVVFDVETVFRYPWAMSFDVLRVSVFIEDLIF
        MFLLY+YDIFWVFLIISSVIPILAFLIS VLAPLSKEPEKLSSYE GIEP+G+AWVQFRIRYYMF LVFVVFDVETVF YPWAMSFDVL VSVFIE LIF
Subjt:  MFLLYDYDIFWVFLIISSVIPILAFLISEVLAPLSKEPEKLSSYELGIEPIGNAWVQFRIRYYMFPLVFVVFDVETVFRYPWAMSFDVLRVSVFIEDLIF

Query:  VLILIVGLVYAWRKGALEWS
        VLILIVGLVYAWRKGALEWS
Subjt:  VLILIVGLVYAWRKGALEWS

A0A1X9Q1U8 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic4.4e-5192.5Show/hide
Query:  MFLLYDYDIFWVFLIISSVIPILAFLISEVLAPLSKEPEKLSSYELGIEPIGNAWVQFRIRYYMFPLVFVVFDVETVFRYPWAMSFDVLRVSVFIEDLIF
        MFLLY+YDIFWVFLIISSVIPILAFLIS VLAPLSKEPEKLSSYE GIEP+G+AWVQFRIRYYMF LVFVVFDVETVF YPWAMSFDVL VSVFIE LIF
Subjt:  MFLLYDYDIFWVFLIISSVIPILAFLISEVLAPLSKEPEKLSSYELGIEPIGNAWVQFRIRYYMFPLVFVVFDVETVFRYPWAMSFDVLRVSVFIEDLIF

Query:  VLILIVGLVYAWRKGALEWS
        VLILIVGLVYAWRKGALEWS
Subjt:  VLILIVGLVYAWRKGALEWS

A0A218KG53 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic4.4e-5192.5Show/hide
Query:  MFLLYDYDIFWVFLIISSVIPILAFLISEVLAPLSKEPEKLSSYELGIEPIGNAWVQFRIRYYMFPLVFVVFDVETVFRYPWAMSFDVLRVSVFIEDLIF
        MFLLY+YDIFWVFLIISSVIPILAFLIS VLAPLSKEPEKLSSYE GIEP+G+AWVQFRIRYYMF LVFVVFDVETVF YPWAMSFDVL VSVFIE LIF
Subjt:  MFLLYDYDIFWVFLIISSVIPILAFLISEVLAPLSKEPEKLSSYELGIEPIGNAWVQFRIRYYMFPLVFVVFDVETVFRYPWAMSFDVLRVSVFIEDLIF

Query:  VLILIVGLVYAWRKGALEWS
        VLILIVGLVYAWRKGALEWS
Subjt:  VLILIVGLVYAWRKGALEWS

A0A6H0ETI4 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic4.4e-5192.5Show/hide
Query:  MFLLYDYDIFWVFLIISSVIPILAFLISEVLAPLSKEPEKLSSYELGIEPIGNAWVQFRIRYYMFPLVFVVFDVETVFRYPWAMSFDVLRVSVFIEDLIF
        MFLLY+YDIFWVFLIISSVIPILAFLIS VLAPLSKEPEKLSSYE GIEP+G+AWVQFRIRYYMF LVFVVFDVETVF YPWAMSFDVL VSVFIE LIF
Subjt:  MFLLYDYDIFWVFLIISSVIPILAFLISEVLAPLSKEPEKLSSYELGIEPIGNAWVQFRIRYYMFPLVFVVFDVETVFRYPWAMSFDVLRVSVFIEDLIF

Query:  VLILIVGLVYAWRKGALEWS
        VLILIVGLVYAWRKGALEWS
Subjt:  VLILIVGLVYAWRKGALEWS

A0A6M3RTZ0 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic4.4e-5192.5Show/hide
Query:  MFLLYDYDIFWVFLIISSVIPILAFLISEVLAPLSKEPEKLSSYELGIEPIGNAWVQFRIRYYMFPLVFVVFDVETVFRYPWAMSFDVLRVSVFIEDLIF
        MFLLY+YDIFWVFLIISSVIPILAFLIS VLAPLSKEPEKLSSYE GIEP+G+AWVQFRIRYYMF LVFVVFDVETVF YPWAMSFDVL VSVFIE LIF
Subjt:  MFLLYDYDIFWVFLIISSVIPILAFLISEVLAPLSKEPEKLSSYELGIEPIGNAWVQFRIRYYMFPLVFVVFDVETVFRYPWAMSFDVLRVSVFIEDLIF

Query:  VLILIVGLVYAWRKGALEWS
        VLILIVGLVYAWRKGALEWS
Subjt:  VLILIVGLVYAWRKGALEWS

SwissProt top hitse value%identityAlignment
A9L9A1 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic3.3e-5188.33Show/hide
Query:  MFLLYDYDIFWVFLIISSVIPILAFLISEVLAPLSKEPEKLSSYELGIEPIGNAWVQFRIRYYMFPLVFVVFDVETVFRYPWAMSFDVLRVSVFIEDLIF
        MFLLY+YDIFW FL+ISSVIPILAF+IS VLAPLS+ PEKLSSYE GIEPIG+AWVQFRIRYYMF LVFVVFDVETVF YPWAMSFDVL VSVFIE LIF
Subjt:  MFLLYDYDIFWVFLIISSVIPILAFLISEVLAPLSKEPEKLSSYELGIEPIGNAWVQFRIRYYMFPLVFVVFDVETVFRYPWAMSFDVLRVSVFIEDLIF

Query:  VLILIVGLVYAWRKGALEWS
        VLILIVG VYAWRKGALEWS
Subjt:  VLILIVGLVYAWRKGALEWS

B2XWK9 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic1.9e-5186.67Show/hide
Query:  MFLLYDYDIFWVFLIISSVIPILAFLISEVLAPLSKEPEKLSSYELGIEPIGNAWVQFRIRYYMFPLVFVVFDVETVFRYPWAMSFDVLRVSVFIEDLIF
        MFLLY+YDIFW FL+ISSVIPILAFL+S +LAP+ K+PEKLSSYE GIEPIG+AW+QFRIRYYMF LVFVVFDVETVF YPWAMSFDVL VSVFIE LIF
Subjt:  MFLLYDYDIFWVFLIISSVIPILAFLISEVLAPLSKEPEKLSSYELGIEPIGNAWVQFRIRYYMFPLVFVVFDVETVFRYPWAMSFDVLRVSVFIEDLIF

Query:  VLILIVGLVYAWRKGALEWS
        VLILIVGLVYAWRKGALEWS
Subjt:  VLILIVGLVYAWRKGALEWS

P52765 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic2.5e-5187.5Show/hide
Query:  MFLLYDYDIFWVFLIISSVIPILAFLISEVLAPLSKEPEKLSSYELGIEPIGNAWVQFRIRYYMFPLVFVVFDVETVFRYPWAMSFDVLRVSVFIEDLIF
        MFLLY+YDIFW FLIISS+IPILAFLIS +LAP+SK PEKLSSYE GIEP+G+AW+QFRIRYYMF LVFVVFDVETVF YPWAMSFDVL VSVFIE LIF
Subjt:  MFLLYDYDIFWVFLIISSVIPILAFLISEVLAPLSKEPEKLSSYELGIEPIGNAWVQFRIRYYMFPLVFVVFDVETVFRYPWAMSFDVLRVSVFIEDLIF

Query:  VLILIVGLVYAWRKGALEWS
        VLILIVGLVYAWRKGALEWS
Subjt:  VLILIVGLVYAWRKGALEWS

Q4VZH0 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic1.2e-5392.5Show/hide
Query:  MFLLYDYDIFWVFLIISSVIPILAFLISEVLAPLSKEPEKLSSYELGIEPIGNAWVQFRIRYYMFPLVFVVFDVETVFRYPWAMSFDVLRVSVFIEDLIF
        MFLLY+YDIFWVFLIISSVIPILAFLIS VLAPLSKEPEKLSSYE GIEP+G+AWVQFRIRYYMF LVFVVFDVETVF YPWAMSFDVL VSVFIE LIF
Subjt:  MFLLYDYDIFWVFLIISSVIPILAFLISEVLAPLSKEPEKLSSYELGIEPIGNAWVQFRIRYYMFPLVFVVFDVETVFRYPWAMSFDVLRVSVFIEDLIF

Query:  VLILIVGLVYAWRKGALEWS
        VLILIVGLVYAWRKGALEWS
Subjt:  VLILIVGLVYAWRKGALEWS

Q68S01 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic1.5e-5188.33Show/hide
Query:  MFLLYDYDIFWVFLIISSVIPILAFLISEVLAPLSKEPEKLSSYELGIEPIGNAWVQFRIRYYMFPLVFVVFDVETVFRYPWAMSFDVLRVSVFIEDLIF
        MFLLY+YDIFW FLIISS+IPILAF IS VLAP+SK PEKLSSYE GIEP+GNAW+QFRIRYYMF LVFVVFDVETVF YPWAMSFDVL VSVFIE LIF
Subjt:  MFLLYDYDIFWVFLIISSVIPILAFLISEVLAPLSKEPEKLSSYELGIEPIGNAWVQFRIRYYMFPLVFVVFDVETVFRYPWAMSFDVLRVSVFIEDLIF

Query:  VLILIVGLVYAWRKGALEWS
        VLILIVGLVYAWRKGALEWS
Subjt:  VLILIVGLVYAWRKGALEWS

Arabidopsis top hitse value%identityAlignment
AT2G07751.1 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein1.2e-1133.96Show/hide
Query:  VFLIISSVIPILAFLISEVLAPLSKE-PEKLSSYELGIEPIGNAWVQFRIRYYMFPLVFVVFDVETVFRYPWAMSFDVLRVSVFIEDLIFVLILIVGLVY
        ++L+IS ++ ++   +    A  S   PEKLS+YE G +P G+A  +F IR+Y+  ++F++ D+E  F +PWA+  + + +  F   + F+ IL +G +Y
Subjt:  VFLIISSVIPILAFLISEVLAPLSKE-PEKLSSYELGIEPIGNAWVQFRIRYYMFPLVFVVFDVETVFRYPWAMSFDVLRVSVFIEDLIFVLILIVGLVY

Query:  AWRKGA
         W++GA
Subjt:  AWRKGA

ATCG00440.1 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein2.8e-5083.33Show/hide
Query:  MFLLYDYDIFWVFLIISSVIPILAFLISEVLAPLSKEPEKLSSYELGIEPIGNAWVQFRIRYYMFPLVFVVFDVETVFRYPWAMSFDVLRVSVFIEDLIF
        MFLLY+YDIFW FL+ISS IP+LAFLIS VL+P+ K PEKLSSYE GIEPIG+AW+QFRIRYYMF LVFVVFDVETVF YPWAMSFDVL VS FIE  IF
Subjt:  MFLLYDYDIFWVFLIISSVIPILAFLISEVLAPLSKEPEKLSSYELGIEPIGNAWVQFRIRYYMFPLVFVVFDVETVFRYPWAMSFDVLRVSVFIEDLIF

Query:  VLILIVGLVYAWRKGALEWS
        VLILI+GLVYAWRKGALEWS
Subjt:  VLILIVGLVYAWRKGALEWS

ATMG00990.1 NADH dehydrogenase 31.2e-1133.96Show/hide
Query:  VFLIISSVIPILAFLISEVLAPLSKE-PEKLSSYELGIEPIGNAWVQFRIRYYMFPLVFVVFDVETVFRYPWAMSFDVLRVSVFIEDLIFVLILIVGLVY
        ++L+IS ++ ++   +    A  S   PEKLS+YE G +P G+A  +F IR+Y+  ++F++ D+E  F +PWA+  + + +  F   + F+ IL +G +Y
Subjt:  VFLIISSVIPILAFLISEVLAPLSKE-PEKLSSYELGIEPIGNAWVQFRIRYYMFPLVFVVFDVETVFRYPWAMSFDVLRVSVFIEDLIFVLILIVGLVY

Query:  AWRKGA
         W++GA
Subjt:  AWRKGA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTCTGCTTTACGATTATGATATTTTCTGGGTTTTTCTAATAATATCAAGTGTTATTCCTATTTTGGCATTTCTAATTTCTGAAGTTTTAGCCCCTCTTAGCAAAGA
GCCAGAGAAACTTTCGAGTTATGAATTGGGAATAGAACCAATAGGCAATGCTTGGGTACAATTTAGAATCCGTTATTATATGTTTCCTCTAGTTTTTGTTGTTTTTGATG
TTGAAACCGTTTTTCGTTATCCGTGGGCAATGAGTTTTGATGTATTAAGAGTTTCTGTCTTTATAGAAGATTTAATTTTTGTGCTTATTCTAATTGTCGGTTTAGTTTAT
GCATGGCGAAAAGGAGCATTGGAATGGTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTTCTGCTTTACGATTATGATATTTTCTGGGTTTTTCTAATAATATCAAGTGTTATTCCTATTTTGGCATTTCTAATTTCTGAAGTTTTAGCCCCTCTTAGCAAAGA
GCCAGAGAAACTTTCGAGTTATGAATTGGGAATAGAACCAATAGGCAATGCTTGGGTACAATTTAGAATCCGTTATTATATGTTTCCTCTAGTTTTTGTTGTTTTTGATG
TTGAAACCGTTTTTCGTTATCCGTGGGCAATGAGTTTTGATGTATTAAGAGTTTCTGTCTTTATAGAAGATTTAATTTTTGTGCTTATTCTAATTGTCGGTTTAGTTTAT
GCATGGCGAAAAGGAGCATTGGAATGGTCTTAG
Protein sequenceShow/hide protein sequence
MFLLYDYDIFWVFLIISSVIPILAFLISEVLAPLSKEPEKLSSYELGIEPIGNAWVQFRIRYYMFPLVFVVFDVETVFRYPWAMSFDVLRVSVFIEDLIFVLILIVGLVY
AWRKGALEWS